Array 1 13617-13066 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIJA01000060.1 Methanocorpusculum sp. GPch4 k141_28245_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 13616 32 100.0 33 ................................ ATGGATGCCGCGGGTGTTCCGACTCTTGAACAA 13551 32 100.0 33 ................................ ACTACCAAATAAAACCTTTAGCGGGGTCAGAGA 13486 32 100.0 33 ................................ AACTGCAACAACAGCAGATTTACGGAATGAAAG 13421 32 100.0 32 ................................ ATCTGATGAGGTCACATATGCCATCTACAAAA 13357 32 100.0 34 ................................ AATCGTTCCCGTACAAAAAGGCTCTTGAGTTTGT 13291 32 100.0 33 ................................ CCTCCGGCGTCACCTTCTTAAACTGCCCTGCTT 13226 32 100.0 33 ................................ AGAGCGTGCGCTGTGGGCGTCCGTGCATCCGTC 13161 32 100.0 32 ................................ CTTACCAAGGAAGCGCTAGCCTCTGATTCGCA 13097 32 84.4 0 ..........C..C............CA...G | ========== ====== ====== ====== ================================ ================================== ================== 9 32 98.3 33 GTCGTGCCCCTCGTGGGCACGTGGATTGAAAT # Left flank : ACACATCATCATTAAATTGCCCCG # Right flank : AAGCGCCGGGTCGTACATCGAAGAACTTTCATTGAGGAAGGACTGCCTGGAAAGCCCAAGCGGGCAAAGCCCATTTGAAGCGGCATCCAAATCTTCGATTTGCACGCATCAGCCTGAGAGAGCACCCGAACGCAAGAAAAATGCGATTCAAACGAGGGCTGCAAGCCCGAGTCGGAGAACAAATCTTTGATTTGCGTATTTTTCGTGGATTTCGTTGGCGGGTCGGAGACGTAGTCGACGACCTTAGCTGAGCAAAGTGAAGCTTTGCGAGTGGGAGGGGTGGACGCTGAAAGCGGCCGACCTCAGCGGAGGCGGGTTGCCCCGAAGGGGCGGGCTCAGCGGAGGCGGGTTGCCCCGAAGGGGCAACCTCAGCGGAGCAAATCTTTGATTTGCGACCAAGGCTTTGATTTGCGACCAAATCTTTGATTTGCGACCAAATCTTTGATTTGCGACCAAGGCTTTGATTTGCGACCAAGGCTTTGATTTGCGACCAAATCTTT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTGCCCCTCGTGGGCACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.50,-6.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 1983-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIJA01000062.1 Methanocorpusculum sp. GPch4 k141_28501_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1982 32 100.0 32 ................................ TCAATTATGATTGAGGTCGGTTTAAGAGTTAT 1918 32 100.0 32 ................................ TCGGAGGAGACCGGCATCACACGCAAAACCAT 1854 32 100.0 33 ................................ CTTTAATTTCTGATGCGTGTTCGATAGCTGTTC 1789 32 100.0 33 ................................ TATCACCACTGAATCGGAACTCAAAGGACGTAC 1724 32 100.0 33 ................................ GTATTATACCGACAACCAGCACGAACACGGATG 1659 32 100.0 33 ................................ ATTTGAGACACGTTTCAAGCCTACATTAGACGA 1594 32 100.0 33 ................................ TATGATTTCGTTCAGGCGCTTAATGTCGTTAAC 1529 32 100.0 31 ................................ CTTCATCATGAAGAATAGAGGTCTTATCAGT 1466 32 100.0 35 ................................ ATCTTCACGGTCATAATCCCTATAGGCCGCGTCTA 1399 32 100.0 33 ................................ AAATTGCGCCCGTTTGGCCGCTCCGGCACATAC 1334 32 100.0 33 ................................ TTATATCCCCGGTTACATTCCCCGTTACATCCC 1269 32 100.0 33 ................................ TTTGTTCATGCTCTGCAGGCTCAACACGGGATA 1204 32 100.0 33 ................................ CTTCTTGAGAGGGCAATTCCAGGGAAAACCCTC 1139 32 100.0 32 ................................ TTTGAAGAGCAAATCGATGCACTCAAGAGAGA 1075 32 100.0 33 ................................ CAATGAGGCGATTCAAGCGAATATAGAACTTGA 1010 32 100.0 33 ................................ CAAAAGAAATATACACACACCATGAGGCCCAGA 945 32 100.0 33 ................................ TTCAAGTGAAAGCATATACTCCCATATCTTTGG 880 32 100.0 31 ................................ GTCTATAATAACTGTGCCTATCGCCCCCTTG 817 32 100.0 33 ................................ CATTAACTGCCATTATGTCGCCCCCGCGCCCAG 752 32 100.0 34 ................................ TATAATATGATGATTTGTATGCCCTCCAGTGCGG 686 32 100.0 33 ................................ TTAGTTCCTGGGTCAATGTCAAATACAACACAT 621 32 100.0 34 ................................ AAAAAAGCATTGGTTGAAACAAGAAGAGCTTACC 555 32 100.0 33 ................................ CAGAAATGTCCTCTAAAATGTCCCCTATCTCTA 490 32 100.0 34 ................................ TTTGTGGTTACGCTTGTAGTCGCATTCGTGCCCG 424 32 100.0 32 ................................ ATCTGAAAATGCGATACGCATCTCATCGGCGT 360 32 100.0 33 ................................ ACTAACGACGGTAAACAGGTATTTTATACTCCC 295 32 100.0 33 ................................ GTAAATGGCCTTAAGCCATCCTTTAGATTCTGT 230 32 100.0 34 ................................ ATCGCTCATGCGGCTGTCGTCAAGGTCGCCGACC 164 32 100.0 33 ................................ ACAGTAACTTTTGTCATGTGAATATAATATTAC 99 32 100.0 31 ................................ ATAATATATTTTATATTATGTGTAATGGCAA 36 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 31 32 100.0 33 GTCGTGCCCCTCGTGGGCACGTGGATTGAAAT # Left flank : GTGAGGTGAGAGATGTTTGTTTTGGTTACATATGATGTGAATACGGAGACGCCGGAGGGGAGACGGCGGCTTCGTCAGGTCGCAAAGATCTGTAAAAATTTTGGGGTGAGAGTGCAGAACTCAGTGTTTGAGTGCGTAGTGGATTCTGTTCAGCTGATGGATTTGAAGTTCAGGATAGGAGAGGTTATTAATCCAGAAACGGATAGTGTTAGATATTATAATCTCGGAAAGCAGGGTAGAGATCATGTTGAGCATGTTGGAGCAAAGCCTGGGTTGAACGTGGATGATGCGCTGATTTTTTAGATTCTTTTTTTTCGCGAAGGGGTTGTGCCCATGATTTTTCCGGGAGGTTCGCGATGTCTGCGGTTTTTGGTTTGTTTTTGGGTTTGGTGAAGATTTTGAATATTTCCAATGGAATATAATGTTTTACGTGTGGAACTTTCTGCTGATGAGGGAGGGAGAGAATTATATGGGTGGAGTTATAGTATATTAGAGTTAGA # Right flank : TCAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTGCCCCTCGTGGGCACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.50,-6.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : NA //