Array 1 793288-794919 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNDE01000001.1 Thermotoga sp. KOL6 contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 793288 30 76.7 37 CC..AT.A.....C......A......... AAAGAAGCGAAAAGCATCGGAGAGTTTTGGAAATTGT 793355 30 96.7 37 ........T..................... GACACGAAGACCTCGCAAAGATCGTGTCAAATCTTCT 793422 30 100.0 36 .............................. TTTTTGGAACTCTCAAAACTTTATTGATCACTTCAT 793488 30 100.0 37 .............................. GAGAGGGCGACGGGTTTATCCCACTCGCCGTCACACA 793555 30 100.0 38 .............................. ACAGTTAACAATGGTATTCTAACAATCACTGTTATATA 793623 30 100.0 36 .............................. TTTGGTTGAATATGTATGTGGGACTTATGACCAACC 793689 30 100.0 36 .............................. ACTTAGCTGAAGGGGGTTGTTAAAATGCCAGGTTCA 793755 30 100.0 37 .............................. TGTAATTTAACGCTCAAAGACGAGTTAGACGATATTT 793822 30 100.0 36 .............................. TGGTGTAACTCATCTCTGTTAAAGCATCTCGAAACT 793888 30 100.0 35 .............................. TTGAGGGGGGTGAATGTTGTGAGGTTGGTGGTTGC 793953 30 100.0 37 .............................. TAAGGACTTTCTAAGGGAGAGAAAGGAGGTTAAACTA 794020 30 100.0 37 .............................. AAGGGAAGCGATCGTTGGAGTGAGCTTCACATGGAAT 794087 30 100.0 35 .............................. GATTACCCTGTAACGATATACATGTATTACATCAG 794152 30 100.0 37 .............................. TGGGTAAAGTTTGGAGGGAACTGATAGGAGAACAGGA 794219 30 100.0 37 .............................. TTAAACGATCTATCGAATGTAGCTGATACAATAATCT 794286 30 100.0 37 .............................. GTGTCAAATCGCAGTCAAACACCATCGGGAATCCTCA 794353 30 100.0 37 .............................. CAAAGCGAGAATCAGAAAGTAAGGGCAAAAAAGAATA 794420 30 100.0 37 .............................. GTGTCAAATCGCAGTCAAACACCATCGGGAATCCTCA 794487 30 100.0 37 .............................. TGGGTAAAGTTTGGAGGGAACTGATAGGAGAACAGGA 794554 30 100.0 37 .............................. TTAAACGATCTATCGAATGTAGCTGATACAATAATCT 794621 30 100.0 36 .............................. TAAAGCTACCTAGATAGAATCCTTGATCAAAGGCTT 794687 30 100.0 38 .............................. CGCATTTTGACGATGGGACATATCAGGTAGTCTTCAAA 794755 30 100.0 37 .............................. TGCGATTATTTTCCACAACTTGAAGCTCAATACAATT 794822 30 100.0 38 .............................. TCTTCTAAACATCAGAATTAAAAGTGCAATTGTTAACA 794890 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 25 30 98.9 37 GTTTCCATCCCTCTAAGGAAGTATTGAAAC # Left flank : TTCATAATTCCACAACTCTAATTTAGTTACTTCGACAAAAAGAGGAATAACGTTTTCTCCTAAATCTATATAGGCAGTTTCATACTTAGATGTGCCAGGCAGTATGCTGAAATCGCCATGGCTTCCTGATATTTTCGTAATTTCTGTTCCGGACTGGCAAGTAACTATAAAGTACACTGTATAAATATCGATTTCGTACTTTCCAGTGTTTGTTATCTTATAATCAACTTTTGCGGTGTTAAGATAGTCATCAAAAGTTAATTCTATTAACTCGATTTCAGCGTCAAGATCGCGGTTGACTTGAGCTGAGGTCGAGGAAGAACTCGTAGATGAAGAAGGTCCAACACAACCTTCAAGTAAAAACACAACCACCACAAAGATCATCAGATACACGTACACACTCTTCTTTCTGAGTTTCACTTTCTTTCCCTCCCTTTTCAAATGGTTTTGTAGAAATTTGGCAAAAAAATAAGGCCGCTTCAAGCGGCCTGATATTAGTT # Right flank : CCATCTGATTCGTAAGAAATTATAGAACATAGATGAGTGGGAAGTCAAGGGAAGAAGGAAAAAAAGGACAAAGTGGGAAGATGAGACACAAAAACAAAAGATGATACCGGAAGTTGTATGTGATGGCAAAATTGAATAATGGAATACGAAGCGAATATCCTATCACAAGAGATAAAAAACACTATGAATTATCAACACCTAAAACAGGCTGTTTTTGTTCAAAAAGGTCTCTTTCAAAAAAGTTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCTCTAAGGAAGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA // Array 1 578262-580738 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNDE01000002.1 Thermotoga sp. KOL6 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 578262 30 96.7 36 .............T................ CGATGGAATAAAGGAACAAATAATGGAAGCTACCTA 578328 30 93.3 38 ........C....T................ TTCTGCTGCAGCTCCGCGCAGAATATAAACAACTCATG 578396 30 93.3 35 ........C....T................ TCTCAGCGATCGATATGATGCCGAAACACATGTAG 578461 30 93.3 35 ........C....T................ CACTACAATGCAGGGTTGAATCCTGTCCTTCCTTT 578526 30 93.3 35 ........C....T................ TTTATCTCACCTCTCTCTTCCTCTATCAAGTTTGT 578591 30 93.3 37 ........C....T................ CTTTCATATCCTTCGTAATCCCATTCTCTACTGGCAA 578658 30 93.3 37 ........C....T................ CCCTCTTTCACCTCACTGATCTTTTCTTCCACAACCT 578725 30 93.3 35 ........C....T................ ATGAAGAAATCTTACAACAAAATATTATACATCGA 578790 30 96.7 36 .............T................ CTTTCTGGGAGGAGTATTTCAAGCGCGTAGAGGCAA 578856 30 96.7 35 .............T................ CCAGAACAAGCACCAGATTCGAGTTTTATATGTGT 578921 30 96.7 35 .............T................ TTGGAACTCCTCTTTCCCTATCCCAAGTACACCTC 578986 30 96.7 38 .............T................ CACTGGAGACCAAGCGGCAGCTGTTATGCAATACATCT 579054 30 96.7 36 .............T................ TCTGCTTCGCTCTCAAAGGTTCGGTCGATTTCAAAA 579120 30 96.7 36 .............T................ TCAAGTCCTTCCAGCACTGGAGCTTTATGAGGATGG 579186 30 96.7 37 .............T................ CCGTTATTTGTAGCTTCCATCCCGCCGTCATTTCCAT 579253 30 96.7 36 .............T................ ATAATTTTCGACGAAGCATTTTTCAATCCGTTTATG 579319 30 96.7 36 .............T................ TATTTTCATCATCACTATCTCTCTTTGTCTTTTCTT 579385 30 96.7 36 .............T................ ATATCGTGAGTTGGCGCTGCAGCAAGCAGAATCGAT 579451 30 100.0 37 .............................. TATATAGAATTTTCGCTAGGGAATTTTATATAGAAAA 579518 30 100.0 35 .............................. ATTTCCATGTGATACAGCTTCAAAGTTCTCAAGCA 579583 30 100.0 38 .............................. ACGTTTAGCGTCGAGGATCTTCTCGATATTTTGGATTC 579651 30 100.0 36 .............................. GTGGATATGAACACATGTCCAGATCCCGCTACAATG 579717 30 100.0 36 .............................. CTTCCTTTCAGAGCCGGGAAATCTTGTTAGTTGTAT 579783 30 100.0 35 .............................. CCGGCGGGCTTTCTACAGCAAGGAGGGGAACGCAA 579848 30 100.0 36 .............................. ATGGGTTGGTCTCCCAAAAATGGAAATGCCCGCCTG 579914 30 100.0 36 .............................. CGAGATAAAAACGATGATTGTAGCGAGAAATATTGT 579980 30 100.0 37 .............................. TTGGAGTTGGATTCTTTTTAGCTAAACAAGGTAAATA 580047 30 100.0 35 .............................. GAAAGCGAGTCCGATTGACTTGAAGGTGTAGTCGA 580112 30 100.0 35 .............................. TATCAGTAAGAGACGAAGCATTCGTACTTTTCAGA 580177 30 100.0 36 .............................. CAAATCTAGTTGTGTATCCCAAGAATTTGAAAGGAA 580243 30 100.0 36 .............................. GTACAAAGGTGAGTTTAGAGTAGTCACAGAAAAAGA 580309 30 100.0 37 .............................. CATGTTACAACCTGTAAAACACCCCAACGTTTAGCGT 580376 30 100.0 36 .............................. TCCGGTTATTTTCAACAAAACAGGTTTAGTGTTATC 580442 30 100.0 37 .............................. CCATGAAGTCACATAGGAAGCCCAGCACAAAACAGAG 580509 30 100.0 37 .............................. ATCATAATACTTTATTTGTTTCCACACCATCCGATCT 580576 30 100.0 35 .............................. CAGTTTCAAATACTCACCTGGATGGGTGGTGGATG 580641 30 100.0 38 .............................. CGGATCTTTAGACATAGGAAATTTGAACGCGGGGGATG 580709 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 38 30 97.8 36 GTTTCCATTCCTCCAAGGAAGTATTGAAAC # Left flank : TGTCGCTACTCTTTCCGAAAATGGTTTGAAATCTATTTTCGCTTCTTCAACTGCTTCTTTTGTGCTGACCAAAGCAAAATGGACAAAACGATCGGTTCTTTTTACCAGCTTGGGATTTATGTACTCCTCCGGTTTGAAATCCCTGACTTCAGCAGCAATTTGGACTGGAAGGTTAGATGCGTTAAAAGAAGATATTCGATCTATCATTACTTTTGTTTCTCTAAGACCTTCTAAATTTCTTTCTTTTCCCACTCCAAAAGGACTTACAACACCCATTCCTGTTATAACAACTCGCCTCAAAATACCACCTCCTGACAAAAAAATCTGGCATGATTATATCATAACAAATAGCAAGGGTTCAACCACAGGATATAAGTGAAAAAACGGGGAGAAAATCTCCCCGAGTTTTTTAATAAAACTATTGAAGCTGGAGATTACAGCAAAAATAAGGAAGTGTTGAAACTGTACAAGGAAATTCACGATGTCGCGGGCACTGCCGA # Right flank : CCATCTGATTCGTAAGAAATTATAGAACATAGATGAGTGAGAAGTCAAGGGAAGAAGGAAAAAAAGGGACAAAGTGGGAAGATGAGACACACAAACAAAAGATGATACCGGAAGTTGTATGTGATGGCAAAATTGAATAATGGAATACGAAGCGAATATCCTATCACAAGAGATACAAAACACTATGAATTATCAACACCTAAAACAGGCTGTTTTTGTTCAAAAAGGTCTCTTTCAAAAAAGTTCCACAATTCACAAAATCAAGAAAGAAGTTTCACATTATTGTGTTAAATTGAAATGTCTCTTTTCTCTTCGAGAGTTGTTTTTCAGATATTATGATCAT # Questionable array : NO Score: 8.95 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCCTCCAAGGAAGTATTGAAAC # Alternate repeat : GTTTCCATTCCTCTAAGGAAGTATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.10,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : NA // Array 1 155587-157072 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNDE01000003.1 Thermotoga sp. KOL6 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 155587 30 96.7 36 ........C..................... TCTTTTCTGCTAGAGTTCTGAGCACACCACAGGGAT 155653 30 100.0 37 .............................. AAGTTCAGATTGATGGACCACTCATGAAGTATGTCGT 155720 30 100.0 36 .............................. CCCACCGCCGTAATGCTTGTTGGATTTGCGGATGTT 155786 30 100.0 36 .............................. ATATAAACCTTCTCCATTTGCCCTTCGGTGGCTCGC 155852 30 100.0 36 .............................. TCTGGAAGTTCGATTAGTTAACTTTGCTGAAAGCGA 155918 30 100.0 37 .............................. AGCCACTCAAAGTCTGCTATGAACGGTGGACGTCCAT 155985 30 100.0 35 .............................. GAGATGCCTTGTATTCTCTATTGCTTCAGTTCTGT 156050 30 100.0 36 .............................. CCATCGTTGCCTGCATGCCAAATTTTGTTTCCTTTG 156116 30 100.0 36 .............................. AAGTACATTACAGATGGATAAAGAGAGTTAAAATCA 156182 30 100.0 36 .............................. TAGACTAACAACATCTTTCTTATACGTTGGAGAACC 156248 30 100.0 36 .............................. GGTTCGGTGTAGTCTATAACGTCCTGCATAGTTGTC 156314 30 100.0 37 .............................. TGAAATAAATCATGTTATCATAATCGATTGCACAATC 156381 30 100.0 37 .............................. TACTTAAGCCGGATACTGTATAAGAACTCCAGTTTTG 156448 30 100.0 38 .............................. GCAGACGATTGGGTGATTGCATATTGGAAGAAACCAGT 156516 30 100.0 35 .............................. AGACTCATTTTAATTTGAGCATGTGAAAAAGAACG 156581 30 100.0 35 .............................. TAGCTTTGCCGGTTAAAATGGCTTCTTCAATGCGT 156646 30 100.0 36 .............................. GGACTAGGCACAATGTTGTTCGGCAACTGCTGCATA 156712 30 100.0 36 .............................. ACTTGACCATCAACACAGGAACACAAATTGGATCGT 156778 30 100.0 37 .............................. CAGATCCGCAGTACGCTGAGAAATGCTTTGCGGTGTA 156845 30 100.0 36 .............................. ATGTTAGTGATAACGAATATTCTGGTACAACTCGAA 156911 30 100.0 35 .............................. AATTACCACGCAAAAAGGAATGATACGCTGTATGT 156976 30 100.0 37 .............................. TCTTTAGCTTTCTTTTTTGGGACTCTCAAAACTTTAT 157043 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 99.9 36 GTTTCCATTCCTCTAAGGAAGTATTGAAAC # Left flank : CCATGTGTTTCTACCTCCTCTACGATGAGTGTTTCTTTATATTTTCCAGCGACATTGGTTTATTTGTTTCCTCTGGCGCGCCCGGCAGGACTCGAACCCGCAACCATCGGATCCGAAGTCCGACGCTCTATCCAATTGAGCTACGGGCGCGTGCTGGGGTGACCAGCGGGACTCGAACCCGCGACCACCTGATCCACAGTCAGGCGCTCTACCAACTGAGCTATGGTCACCACGAAAACAAAATGGCGCGCCCGGCAGGACTCGAACCTGCAACCCTCGGATTAGAAATCCGATGCTCTATCCTGTTGAGCTACGGGCGCACCAAAAACCATGGAGCGGGCGACGGGACTCGAACCCGCAACCCTCGGCTTGGAAGGCCGATGCTCTACCAATTGAGCTACACCCGCCCTTCAAAGACCCTCCAAGCACTAAAAATATTATCATATCCACTCAAAAACGTCAAGTTCCCCCGGTCAATTTTCATTGATTAAAAACTGCAT # Right flank : CCATCTGATTCGTAAGAAATTATAGAACATAGATGAGTGAGAAGTCAAGGGAAGAAGGAAAAAAAGGACAAAGTGGGAAGATGAGACACAAAAACAAGAGATGATACCGGAAGTTGTATGTGATGGAAAAATTGAATAATGGAATACGAAGCGAATATCCTATCACAAGAGATACAAAACACTATGAATTATCAACACCTAAAACAGGCTGTTTTTGTTCAAAAAGGTCTCTTTCAAAAAAGTTCCACAATTCACAAAATCAAGAAAGAAGTTTCACATTATTGTGTTAAATTGAAATGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCCTCTAAGGAAGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.10,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : NA // Array 1 21573-20550 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNDE01000005.1 Thermotoga sp. KOL6 contig_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 21572 30 90.0 36 .....T..T..............C...... GTAGTAGTTCTCAAAGTCAAACACGCAAAAGGTCTT 21506 30 96.7 36 .........T.................... TTGGAACAACGGTGTCGATGTATATATCCGTAGCAT 21440 30 100.0 36 .............................. AGGAGAACACGAAGCAGAAAGACTCTTGCAACGGTT 21374 30 100.0 35 .............................. TGCAGAAGCATCGAGGAATTTGCAAAATACTTGAA 21309 30 100.0 35 .............................. AACTATGAAAAAAGAGTGTGTTGACAGATATGTTG 21244 30 100.0 38 .............................. GCGCCCACCAAGAAGAAGCAGAAATCGAAGAAGAAGTC 21176 30 100.0 37 .............................. TAACAATGTAGCTTTATATAACAATCTTCCATCCTCA 21109 30 100.0 36 .............................. ATGGATGACCTAATAGACTTCCCGGTTTCAGACACC 21043 30 100.0 36 .............................. AGAAACGTAATAGTTAGTTCATTTGACATATATGAA 20977 30 100.0 37 .............................. TGGAAATATTTAGGTCCAGAATAGGCAGTAGTTATGA 20910 30 100.0 36 .............................. AACAAGTTTAGAGCGACTTGGAAAGGACATTTTGAA 20844 30 100.0 36 .............................. TTGGTAAGGAATTTTATCTTGAAAATGATGTAGCAG 20778 30 100.0 36 .............................. TTTACTACACCGAAGGAGTTGCCGAAGGAAGAATTG 20712 30 100.0 37 .............................. TGTATCAGAAATCGAAATACCGATCATAACAAAAGAA 20645 30 100.0 36 .............................. TTATTTCCAAGGACGAAGAAAAGGACGAAGAAATAG 20579 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 99.2 36 GTTTCCATCCCTCTAAGGAAGTATTGAAAC # Left flank : ACATTTTCTTTTTTGTCTACTTGCTCCATCTTTTTACTAAGTTCGCTCAGTATTTTACTTTCTGAACTCTTGAGTGCTGAATGTATATCCTTCAAAGTAGGATAATTGAAGAAACCGAGGAGCATTTTAAAAGTCTTCTCAGGAGATGTTTTATCTATGAATTTTGCGGTAGGCCCCTTGGAAAAAGAAAAATTCCCCTTTTGACTCTTGTAAAGAAACACTTTTGAATCTCTTCCCCCTGGATTCTTTTCCACTAAAGTTAGTCCATCAAACTTGTAACCTTCCGGAGTCTTTGTGAGCTTGATAGCGATCAGCTTGCCATCTGGTACTTCCTCTGCAAAAGGCGAATAGGAAACTTCAGAAACCTCACCAAGAGAAATTATCTTGTTAAGCAGCTTCATCACCTCCTTTTATTCAAACTATCCGCTTTCTCCTACAACAATATAACTTTTGCTCCTCTGAGGAGGTAACAACTCTTTGATGAAAGCGATTTGAGTGGT # Right flank : CCATCTGATTCGTAAGAAATTATAGAACATAGATGAGTGGGAAGTCAAGGGAAGAAGGAAAAAAAGGACAAAGTGGGAAGATGAGACACAAAAACAAAAGATGATACCGGAAGTTGTATGTGATGGAAAAATTGAATAATGGAATATGAAACGAATATCCTATCACAAGAGATACAAAGCACTATGAATTATCAACACCTAAAACGGGCTGTTTTTGTTCAAAAAGGTCTCTTTCAAAAAAGTTCCACAATTCACAAGATCAAGAAAGAAGTTTCACATTATTGTGTTAAATTGAAATGTCTCTTTTCTCTTCGAGAGTTGTTTTTCAGATATTATGATCACTATATTCACTTCTTCATATGTTTTAGTTCACACAATTATTCTTTTTTCATTGCATACTTTACTTTTCGAAAATGGCATAAAACACTCCTGTTACCGGTAATTGCATACTCTGTATGCTTCTCACCACCACCCTTTCCGCAATACCTAAGCTTGTGAAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCTCTAAGGAAGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : NA //