Array 1 783229-785570 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053642.1 Actinomyces marmotae strain zg-325 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================== ================== 783229 36 100.0 33 .................................... TGCCAGATCGCGTAGTCCCATCCGGCGGCGGTG 783298 36 100.0 34 .................................... TGAGCACGAACCAACGTAAGACGGGAAATCGGTG 783368 36 100.0 36 .................................... GGTCCACTATCAGCCCACCATCAGTGGTGGGCTGAG 783440 36 100.0 34 .................................... GCCGACTCCGCCGGCGACCAGCAGCACCACCGCA 783510 36 100.0 35 .................................... TCCAGAACGTTGTGCGAGTTGATGCGAAAACGGTT 783581 36 100.0 36 .................................... GATGATCTTCTTACCCACATCGGAAAGCATCCCAAG 783653 36 100.0 33 .................................... CTCGCCGACACTGAGCGCCGCTTCCGGCTGCTT 783722 36 100.0 36 .................................... GGGACGCAGAAGGGTCTCGGCGTCCGATTTCCTCAC 783794 36 100.0 37 .................................... GTCTCGGGGCCCCTGGCGCCCCGCTACACCACCGGGG 783867 36 100.0 34 .................................... GCATCGCCGGAACCATATGGATAACGACCCGAGT 783937 36 100.0 35 .................................... CCTGACAAGGATCTCCTTATCGTTTGGGATTCCAA 784008 36 100.0 35 .................................... GGGAGTCCATGGCCGCCGCCATCCACCGGCTCCGC 784079 36 100.0 34 .................................... GCCAGGTACACGACCACCACGCCCCACACCCCGC 784149 36 100.0 36 .................................... GCGCGGGCGATGGGGACGACGAGGGCGGGTTCCAGG 784221 36 100.0 34 .................................... CACCCGCATAAGAGCCCCCGCAGACAGGAGACCA 784291 36 100.0 37 .................................... TCGCCGTCGATACGTCTGGTCGAGTTGAACGCCGGGG 784364 36 100.0 33 .................................... GGCAAACACTCTGTTTGTAGCAGATGTAGCAGA 784433 36 100.0 35 .................................... GAGTCGGGCGTGCGGGTCCAGGTGGAGGCGTAACC 784504 36 100.0 37 .................................... TGGTCACCGATCATCGGCGAGACGAAGGAGACATCGA 784577 36 100.0 34 .................................... GTCGTACCGAGCTCCTGGAGCAGGATGGTCAGGC 784647 36 100.0 38 .................................... CGCATCATCGACCAGTCGTGGTAGTAGAACCACCCCGC 784721 36 100.0 37 .................................... TGGTCGTGGATGAGGGTGATGGTGTCCATGAGCTCGG 784794 36 100.0 34 .................................... GTGTAGGTGCCCTCAGTCTCGTACTTGTACAGGC 784864 36 100.0 35 .................................... CCGTCAGAGTCCGGAGGCGAGAGCTGGGGCGAATC 784935 36 100.0 36 .................................... AGGCGGTATGACGCTCGCGAGATCGTCCAGCCTCCT 785007 36 100.0 62 .................................... ACCCTCGCCGAGTCGTGGGCCTGCACCCTCGCCGAGTCGTGGGCCTGCACCCTCGCTGAGTC 785105 36 100.0 36 .................................... TCGTTGATCGGCGTCTGATCCGTCACGGACACCTTG 785177 36 100.0 36 .................................... GGCCTGATCGAACTCAGCCTGGTTCGTCGCGACGAT 785249 36 97.2 35 .................G.................. CTGGTGGCATTCACGGTAGTGACGACCCTCGTCGG 785320 36 100.0 36 .................................... AGGCGGATCGTGTGAGGTGAGCGCCCGGCTGCTTGG 785392 36 97.2 35 ......................G............. GCGGTCACCCTCGCGTTGCTGTAGGTGTACACTAC 785463 36 97.2 36 ..............C..................... GGGCGGTTGGGGGCACTACATCTGCTCCCAACCGCC 785535 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================================================== ================== 33 36 99.7 36 GTTGCAGTTCCTTCGGGAACTGCGCTTCATTGAGGC # Left flank : TACAAGGGCGTAAGGGTGCGTTGATGCGCGATGATGTGAGGCGAGTGCTCGTCGCCTATGACGTGCCCTCCGACAAGCGGCGCGGCCGAGTGGCGAAGATTCTCCTCAAGTACGGCGACCGGATCCAGTACTCAGTGTTCGTGGTGGACTCCGCGCCAGCGAAGCTCATGCGGCTGCGAGAGGAGCTGAGCGCGGCCGTTGACCCGGATGAGGACTCGATCCTGCTGTGCGACGTCGGGCCGTTGGCCTCGGTCGATGCGAAGCGGTTCACATACGTGGGCCTGACGAGGACCATCACGCCTGAGGGGCCTCTCATCGCCTGACGCGAGCGCTCCGGCGGCACGGGAGACCCGGGGGAGCGCTCGCGTGCGAGGAACGTTGATATCCCAAGGGAGGAGGGCTACGCTACCCTCCAAGCGAGGGTTCGAACCGACTTGACGTCGGCAGCGCTCGCGAAGACCCGTCAGAACCCTTGAGTGCCAGCCGATTCTAGCGGGGCT # Right flank : TTCTCCCATTAGGGGAGGGTGGGTGCGTCACCCGTATTGAGGTTGGGAATGGGCGGGGTTTTGGCCCGCTCGGCTGGAGTTCTTAGGGTGGTCTGGAACGTGTTGTCGACTTCCTGCTTGACGTTCAGGTCGTTTCCCTCGAATGGCGTCTTGATGTCGATTCCGATGCCCTGGTGGACCTTTTCTTCCCGGGCGCTCAGCCGCGGCGTCATAAAAGGTTCCGAGCGCATGGTTGCTGGCCACTATCAGGTCTTGTCTGGGTTCAGGCACCACCGGTGAAACCCACGTTGGGTAGCCGCAGGAGTCGGTCGGCTCAGGGGCGTGCCGACTGACGACGTCCAGTGCCGCATGCGGATAACCGACCCAACGGTCAGGCCGGACGCGCCCCCACTCCAGCGGGAAACCTCAATGAGTATGTGAGTGCAAACACGATCCTACTAAGAGGGCGCCGCTGTTGTTGGTGTTATCTAGTAGTGAGTGCGTTACGATTCGCTTGCCCT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTTCCTTCGGGAACTGCGCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1780285-1779280 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053642.1 Actinomyces marmotae strain zg-325 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1780284 28 100.0 33 ............................ TGGCGATACTGCCAGGATGAGTATGACCTGGCA 1780223 28 100.0 33 ............................ GGAATTCTTCTATGAAAACCCGGTCGCAACTGC 1780162 28 100.0 33 ............................ TGACCGTGTCGGCAACAGAGCCCATGAGCCGGA 1780101 28 100.0 33 ............................ GGTCACCAGTTTCATCGCGGCCAACATCGCGTC 1780040 28 100.0 33 ............................ CTTCTGGCCGGTCTGACCGCCACTACTGGCGCC 1779979 28 100.0 33 ............................ CCGCTGTGCATCAGCACTCCAAACACGCCGCCA 1779918 28 100.0 33 ............................ CTTCCCGCCCTTAGGACAAAACGCCCGCACCAT 1779857 28 100.0 33 ............................ GTCCTCCAGAACCTCGGAGAACTGCCGGTCCAA 1779796 28 100.0 33 ............................ GATGCAGATGTTGATGTCGGGTACTCCTATGGC 1779735 28 100.0 33 ............................ GGACATGGGACGCAAAGCCGCGATCAAGCGGGC 1779674 28 100.0 34 ............................ GGGGATCGTTGAGAAGGCCGGTAGCCAGTACACG 1779612 28 100.0 33 ............................ CGGCGGCAGGTCATGCGCCCGCGCCACAGGTCC 1779551 28 100.0 33 ............................ CATGCCAACCCGATCCGCAACCTGTAAGGAGAA 1779490 28 100.0 33 ............................ GTCCGCCGACCTCACCAGCGGGTGGGAGACGAA 1779429 28 100.0 33 ............................ GACATGGAAGGGCCGGCTCCAGGGAGCGGGTGG 1779368 28 100.0 33 ............................ CCCGGCCTCGGACCATCCCCAGGGGCGGGCGTG 1779307 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 17 28 100.0 33 GTCCAGCCCGTGTAGGCGGGGGTTGAGG # Left flank : CCGGTGCTCGGCGCCGATGGGCGTGGCCGCGACCGGCTTCAGGTGCTGCGTGCCGTGCTCGTGCGTGGCGGGGAGCGAGCTTCTGTCTTGTCGGTGGCGACTCGTGGGGGCGTGGCCAGGATGGGGGCTGCTGAGCCTGGGTCCATGACCTCGTTGCCTCGTGTGATGCGCGCGCTGTGCTCCGGGGGCGAGCGGTGGACGACACTCGTGCCGACCGATGTGGATCGTGACCGCCTTGAGGAGGCCGTCATCGCCGCTGCGGCGCGGAGCGGGTGCCGGGTGCTCGAGGCCGTGCTGCACGACGACCCGGTCGGGGAGATCGGTGTGCCCGCGGACGAGCTCGGGACCAGCAGGCATGTGACAATGGTGGTCAAAGGGAGTCCGTCGACACCGCTCGTCCTGGGAGATGTCATGATGATGCCGGTGGGCGCCGCCGTCGCAGTGAATCCACGACGGCCCTCCGGATGACCAGGGACGCGGAATTCCGCGGATTCCCAAGT # Right flank : AGCGGCTGGCCTGCCCGGGGCGTGTCGCCCAATGGGGGCTGGCTGCCGCCCTCGCTTCGAGAGTACCCGGGCCTGGCCCTAAGTTAACCGGGTTGGGAGCGGAGGAGAGGCGTGGGGCACTTCGGGCTCGCTTCTCACCCGGCGAGGATCGCCGCCAAGCACTCAAGCCAGGTGGCGAGCGCGTTCCACACGCGAGCCACGATTCACCCTCGACCAGGCCGCCCGCGCCCCGCCGCCCCGCCGCCCCGCCGCCCCGCCGCCCCGCCGGCTCGGCGCCCCGCGGCCTCCCCGTCGGCCCGGCGCTCCGCGGCGTTTCGCCGTGCCCGTCGGCCCGGCGCCCCGCGGTGCCTCGCGCCTCCCCGCGCCCTCCCCGCCGCATCCCCTCTGGCCGCGCCCCGTGCCGTGGCCCCTGAGCAGGCCGAATATGGTGCGTGCGGGCGAGGCGTTTATCCTTTCGTCATGCGGCATGGCGCGAGGAATAGGCGAAGGCCGGGGTGGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAGCCCGTGTAGGCGGGGGTTGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //