Array 1 1466-1803 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZPS01000016.1 Lactobacillus delbrueckii subsp. bulgaricus strain CFL1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 1466 36 100.0 43 .................................... AGTTTACCATAATCATTTCACTATTTTCCCTAATCATTTTTTA 1545 36 100.0 39 .................................... GGAGTAAAAAATGGAATCTTTAGTCAAGTACGCACAAGC 1620 36 100.0 38 .................................... ATTGACGTTATCGATGATATTTGCGTAATGATTGAGCA 1694 36 100.0 38 .................................... TAAAGTTGTTATGGATGTATTTAATTTTTTGAATAATT 1768 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 5 36 100.0 40 GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGC # Left flank : AGTGCTCGTATCGCTTTGGAAGCTTGTATTCTCTGCCTTTTATCTTGTCCATCTCGGCTTCCATTCTGTCCAGATCAGCTTCCAGTCTAGCACGCTCGCTAGCCTGCTTCTTGGCCTTGTAGTAGATATGGAAATAGCGGTCAGTGTCGTCATCCGCGTACAGCTTGGCTTTAACCGTCATGCCATAAGTCTGGTAAGCCTTGATGGAGCAGGCTCTCTTTGATTCGAATTCGCCCATGTGCTCCATGATCAAGCCATGTACAAAGGAGGCCCTGCCTTTAACCATCATCACGAAATCATAGTCGCACGAGTCCATGAATTGGATGTTAGCCTTACTGAAGTATCCACGATCAAGAATGAAACCTATCTTCTTATAGCCGTAGCCGCGAATCTTCTCCAGCATGTATTTCAGTTGTGAGACATCCACGATACTGCCCGGGTAGCTTTCGTAAAGCTAGCAAGGAGGAACTTTAAAAATGAAGGATGTTGTTGTAGATTTT # Right flank : CAGATCCTGTTTAAAACGTTATTACGTCGCGCATCCCCAAGCATTTGTCTCGTCTAAATCCTGGTCAACGCCCATCAAACAGCATCCCTCTTTGTCCTATTTTTGGACAAAAAAGGCACCTCTGCTAATTGAGAACATATAAATTATACCACACCAGATGCTACACCACGATCACCTTAGGTACTGACACTGCCTTCATTGGTGCGTCTGGACCCAAAATGTTAATCTGCTTGTTATTCACCTCATCTGGCAACAGATATAGAGTTATCATTCCATCATCTGGAACTTCTTTTTTCAAAATCCCAATCAAATGGTCTTTCGTAGTATCTGACTCCACCTCCCGTTCATACAGGCTGTACTGCTTCATGTCAAATCCCAACTCAACCAGCCGTTTCCTGTATTCCGCGGCTTTCTTTCGCTCTTCTTTGGTATTTCTAGGCAGATCAAAGCTTAAAAGAAGTACCATCATTTTCCTCCTTGAATGAAAGTCGGCAACTTCA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCGTCTCCTTCTAGCGGAGATAAGTTGTTAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 33164-32158 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZPS01000007.1 Lactobacillus delbrueckii subsp. bulgaricus strain CFL1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================================================================================================================== ================== 33163 36 100.0 30 .................................... AAAATTTGTGAAAGAGTGGGAAAGCGAAGC 33097 36 100.0 30 .................................... CGGGTTGACAATGACTAGTTTCCCGCGTAC 33031 36 100.0 30 .................................... GACTCGGTGGTAAGTATGGAATCCAGCCTC 32965 36 100.0 30 .................................... GCTTACACGAGTGCCTGCACCCGATTCATC 32899 36 100.0 30 .................................... GCGACATCGATGATCCTAAGCTTACTGTAG 32833 36 100.0 30 .................................... CGCGGTCTCCAAGTGGTTTCAAGCCCTCAA 32767 36 100.0 30 .................................... ATGCCGCGAGCTCAGCCTTTGAGGACTCGC 32701 36 100.0 30 .................................... TCAGAGCGCATCCATTTGAATCCACGCTTA 32635 36 100.0 29 .................................... GTACAGACTATTTAACATGCCTTTAAAAA 32570 36 100.0 30 .................................... AGAAGAGGTCGTAAGCTTCGTCAGTGCCGT 32504 36 100.0 30 .................................... TGGATGACACGAAGTTGTTTCCGTTAAGCG 32438 36 100.0 30 .................................... GGAGGCGATGCCGGAGTACTTAAAGGCTGC 32372 36 97.2 143 ...................................G CTGCTTGGATGCGTGGATTGAAATAGTTTTATAGGGGTGCTTATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGTGGCCATCATAATGGCCTAATACTAAGACGACGATTCTACTCATTCCACGCGGGTGGGGGTGATC 32193 36 75.0 0 ....................TC..C...GAC..AAG | ========== ====== ====== ====== ==================================== =============================================================================================================================================== ================== 14 36 98.0 39 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAAATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTTAAATTTGGTGGTCTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATAAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTATATTAAAGCTGTGTTAAAAAATAACG # Right flank : TGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAAACGTTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATACACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTAAGGAGAATAAACACATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCTGCTATCGACCTGGGCCAAATCGCCCTGCGCGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCACTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGGCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGGC # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.78, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //