Array 1 1729645-1729972 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042551.1 Enterobacter hormaechei strain C45 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1729645 28 100.0 32 ............................ TTACAGAAGCCACCAAAGGATAAGGGAGATGG 1729705 28 100.0 32 ............................ ACCCGCTACCAAAGCACTCAGCCAAAGACAGA 1729765 28 100.0 32 ............................ AGCGTGTTCTTGAATCCTGCCAGACCATTAAC 1729825 28 100.0 32 ............................ TCTAACTGCCAGACTTCCTGGCTTTCTCCCTC 1729885 28 100.0 32 ............................ TACGGCGACACCGACACGCGCCAGCGTGTTTT 1729945 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGGGCAGGCAGCTTAGAAA # Left flank : CAGGAACCTGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACTTCTTCATGGCGGGTGGGCATCCACTCAATAGTTTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAATCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACAGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTATTCCTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGAGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGGTGCATAAGTTGTTGATTTTATATGGTTAGGCTGAAGGGGAATAAAAAAGGGGTTGGAGGGAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGATGTAGATTGCTTCA # Right flank : ATCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGAGGTTCCAAAGGCAAATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGAGGTTCCAAAGGCAAATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGCTGACGCTTGCCGGGCTTACAGAGGTTCCAAAGGCAAATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTACAAAGGCATATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGTTGATGCTTACCGGGCCTACAGGTGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1747282-1748151 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042551.1 Enterobacter hormaechei strain C45 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1747282 28 100.0 32 ............................ TGATGCAAGATAACACCGCCACTATGACGATG 1747342 28 100.0 32 ............................ TCCATTATACGCATTGGGCCTAGTACGTCAAA 1747402 28 96.4 32 T........................... CTATACCGCGGGCGGTGATTATTTCCCTTTTC 1747462 28 100.0 32 ............................ GCACTGTTTAATGATCAACGGCCTGTAGCGTT 1747522 28 100.0 33 ............................ CATTGATCGCACAAAGAAACTTCCAGATGGAGC 1747583 28 100.0 32 ............................ TGCGGTAATTGTCGGTACCGGTTCAGTGACTT 1747643 28 100.0 32 ............................ TCGTCAGCATCATCAGGCGCTTCTGAGGGCTT 1747703 28 100.0 33 ............................ TTCGCCAAAGCGCTGGCCGTCCATAACGATGAT 1747764 28 100.0 32 ............................ TTGCGGGGTGGCGGGATTCCGAGCACCCGCAT 1747824 28 100.0 32 ............................ CATGCCGCGGAGTAACTAACGTGATATCCCTT 1747884 28 100.0 32 ............................ CATAGCCTTGCTGATGATTGACTCAGCCCATT 1747944 28 100.0 32 ............................ GATAACGATCCCCCAGACGACTGAAGAGCTCA 1748004 28 100.0 32 ............................ TCTATTTTCCCAGTCAAGGTAAACAGATAACC 1748064 28 100.0 32 ............................ GCAACCGCATTGGCCCTGCTTATCACCATGTT 1748124 28 71.4 0 ......CA....A........A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 15 28 97.9 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGAGTGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGGCAATGAGTGGCTGCTGGAAGATACTGAAATTAAGTGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGTTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAGGTTTAGTGTCGTGCGTCGGGGGAGGGGCTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCCAAACATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATGCATTAAATACGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAAAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 1757629-1758320 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042551.1 Enterobacter hormaechei strain C45 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1757629 28 100.0 34 ............................ CTGCATGACTGGATATCCATTCCGGTTACTGCAC 1757691 28 100.0 32 ............................ CCACATATGCATTCATCTCACCGGTGCGCATC 1757751 28 100.0 32 ............................ TCAGGCTGGCAATACATCTTCGGCATTGTCGG 1757811 28 100.0 32 ............................ TTGCAAATCGAAAATGCGGGACTGTTCAATAT 1757871 28 100.0 32 ............................ CGTCGGAACGGCGCATCGCTGCTGCGGCGGCT 1757931 28 100.0 32 ............................ AGACAAATAGTGTCCGTTCACTCTGCGGGTGT 1757991 28 100.0 32 ............................ TAGTCACCCAGCGTTTGATGCATTACGGTGCG 1758051 28 100.0 32 ............................ AAAAAAGCGATTACGCCGTTCTTCTATCAGGA 1758111 28 100.0 32 ............................ GATTATCGTTTCAAGCTGCGTGACGCTTATTT 1758171 28 96.4 32 ........T................... CACTCAATGCCCATTTGCACAAATGAGTTAAT T [1758177] 1758232 28 100.0 32 ............................ TTCCTGCGATTGCTCTATGGCGCGACGAGTGA 1758292 28 85.7 0 ...........A........T...T..C | T [1758312] ========== ====== ====== ====== ============================ ================================== ================== 12 28 98.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAGCCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGCCCAGAATGTAATATATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGATATGATTTAA # Right flank : CATCCAATGCAGCAGTACTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAATCCGAAACCCAACCACTCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //