Array 1 101354-101669 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXSG01000033.1 Eikenella corrodens strain NML04-0072 Eikcor_contig000033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 101354 36 100.0 34 .................................... TCAGCCAGCCCCAACGCCTTGCCCACCCACTCGC 101424 36 100.0 34 .................................... TCAGCCAGCCCCAACGCCTTGCCCACCCACTCGC 101494 36 100.0 34 .................................... CTCACATGCAGTTGAATATCACCAGCCCAGTGGG 101564 36 100.0 34 .................................... CCGTTAAACTTGCGCCAGCGGTAAAACTCTATTG 101634 36 88.9 0 ................T.T....T.........A.. | ========== ====== ====== ====== ==================================== ================================== ================== 5 36 97.8 34 GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Left flank : ACATGGCAAGACCGAATGGCGGCGCACACAAACATGACCGTAGGCAATCAAGCACACGATACACTCTATAAAGAATGGAAGGCAGCCCTACAAACCGCCGCAGAAAGTCCCGATTTCAACGCGGCAGAGAAAGCCGAAATCGCCGCCGAATTTGCCGTCAAAAAGATGGAGCAAGCGTATAAAAACTGGCTGACCGGCAAACGCCCCAAAGAGCTGAAACCCATCTTGGCGAAGTTGCGCGGCGAATAATAAGCTATTGGCCTTGCAGAAACCCAAAATTTTCAGGTGGCTAAAGCTGTTAAATTGTTGAAAAACGTTGTGAAATTTAAGGTGTACCACTATAATCTGTACCACAAGCTTCCGATGGATAGCGAAGTATCTGTCTTTCGACTGCTCTTTTTATGAATATTTGTTAAATAAAGTCTTTGTTGGTTAAGAAAAAAGCTAACTTTTCTTAACTCAATAATAGATTGAAAGTAATTAGATTTTTAAACTGATGC # Right flank : CTTTTCAGGTAGCCTCAAGTAGGCTACCTGAAAATGTTGGAAGACGTGTCGGTCCATTAGGGATAAACAGCAAAATAGCCTTGATGTAATATCAAGGCTATTTTTGTTTTCAGGCTACCTGAAAGTGGATTTGCGTTTACAGCGTGCCGATGCTGCCTAATATGATGCCTTCGGGCAAGGCTGGTTTGCCCAGCGAATGGATAATGCTGCTGTTGGGCAGGGGATAGAAGCGTAAATTGTCTTGTTTGGCGCTGAGCATGGTGCAAAGTGTGTCAAAACATTGCCGTGCTTGCTCGCGGCTGCCAATGTGTAGAAATACGCTGTTTTGCAGGGGAATGGCGTGCTGGATTAAATAACGGTGTGCTTTTTGCAGGCGGCGTGGGCTGGCGATGTCGTAGGCGATGAGATAGCGCATTTTTATTCCAAAGTGGCGAGCTCGCTTAATTGGATTGCAGGCTGTTGGCTGTAGTGGGCGAGGGTGGCTAAATAGTTGGTACAGA # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 107213-106556 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXSG01000033.1 Eikenella corrodens strain NML04-0072 Eikcor_contig000033, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 107212 36 100.0 33 .................................... AATCCAAAGTCTCGTTTTGAATTTGGCGGCGGT 107143 36 100.0 33 .................................... ATTTCTCTTTGGCTTTCTCAACGAACAAGGCTT 107074 36 100.0 33 .................................... TTAGTTCGCCGTATGCTTGCCGTGGGTCTTTTA 107005 36 100.0 32 .................................... AACCTGTGCGGGATGCGTACCGCGCGTTGCAG 106937 36 100.0 33 .................................... GGAGAACGTTCCTCCGTAGCGGCGACATAAACA 106868 36 100.0 32 .................................... CCAACAACGATGCCTGACTGGCCTCCAGTGCT 106800 36 100.0 33 .................................... GTAATAGCCAAAATAAGCCTCAACGGCGTATAA 106731 36 100.0 34 .................................... CCAAACACCCACGCCCAAACCAGCAAAAAGCCGA 106661 36 100.0 34 .................................... CCGTTAAACTTGCGCCAGCGGTAAAACTCAATTT 106591 36 86.1 0 ....................T..T......A..T.T | ========== ====== ====== ====== ==================================== ================================== ================== 10 36 98.6 33 GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Left flank : AACCAACTGATTTTTTGCGAACTCAAATCCGATTTAAGCTCCCAAAGCAAGCTGGCAGACCCGCTAAGGCAAGTAATCGACCAAAGCCTCAACATGGGCAAAGTACGCCGCGTCCTGATTTTATCGCCCAAAATCCAAAATGATTACCAAAAAGACGCAAGTAAAAAACAACAATGGACAGAATTTGAACGCAACTGTGCCGCCAAAAATATCCAAATCATCATTGCCCGCGACAAAGAGGCTCTAAAAGAGCTGTCGAGTTGACATAAGTGGATGCTTTACATTGTTCAGCCGCAGGAAAATATTAAAAACATTGAGGCCAGCAAAACCCGCGGCTATAATCCCTACTACAAGTTTTCGGATAGATGACAAAAGTCTGTCTTTCGATCGCTCTTTTTAGTAAAGATTTCATTAAATAATGTTTTTGTTGGTTAAGAAATATACTAACTATTCTTAACTATGCAGAAATTTGAAAATAATGGGATTTTTAATTTAGCGCA # Right flank : CAAACAGCCTTGATGGTTTGTTCCATCAAGGCTGTTTTTTGTATCGGGTATTTCTTTCAGGCTACCTGAATAATGCGGTACTGCCCGTTGCCGAATACAGTTTCTTTCCCCAAATGCAACCATTGCCCGATATACAGCATTTGCGAGAAAGCAGGGGGAAGATCGGTCAGTTGCCATGTGCCGATTAGGCCGCTGAGTGGTGTGATTTGCCTTTGACGGTTGGAAAAACGGTGGTACTCATGCCATGAAAGCTGTGGAGGGAAACCTTGCCCGCCGATTTGGCTCGATAGCTCAGCAGTGTCCGTGTGATTATGCCAGTGCAGATGGGCAAGCGTTAGATAACGGCGCAGAAGTTGGCGCAAGAAAATCTCTTGCGTAAGTTCGGTTTCGCGCAAAATCTTGCCTTTTTGTTGGATGCGCAGGGGGGTGAGCAGCTGAATACGCGCTTGTGTAGGATAGCGTTCAGGTAGCCTGATGCTGTTATTGTGCCGCTCGATGGG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //