Array 1 1577375-1575952 **** Predicted by CRISPRDetect 2.4 *** >NZ_NQLF01000001.1 Leuconostoc lactis strain CCK940 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1577374 36 100.0 30 .................................... TCATCCCTTGCAAACGATATAGGTTATACC 1577308 36 100.0 30 .................................... CAGCACCAGCACCTAATACACCACCAATAG 1577242 36 100.0 30 .................................... AGGCTGATATAACAGGTGATACAAGGATAG 1577176 36 100.0 30 .................................... TATCTACTAGAGGGACAACAATACGACCGA 1577110 36 100.0 30 .................................... TTATCTCTCGAAACGATTTAGGTAACGAAG 1577044 36 100.0 30 .................................... TTTACCAGTTGCTAACATCTGTGAATACTG 1576978 36 100.0 30 .................................... CTACTGCAAACCCAGACCACTCATTTATCT 1576912 36 100.0 30 .................................... GGTACCTGTAAGGCCCTATGGGCTACTTAG 1576846 36 100.0 30 .................................... CAATATCATCTAAGTTGAAATATTTGTTAT 1576780 36 100.0 30 .................................... TTGCTGTCGCTGCGTTTCCTGTGGTGTTCT 1576714 36 100.0 30 .................................... ATGAGAAGACACCACACATGCACATTGGGT 1576648 36 100.0 30 .................................... AAATTTCAGAAACAATATTCGTTGCTGACA 1576582 36 100.0 30 .................................... ATAATGTCTTAGAGTTAAGGAAAAGGTTAC 1576516 36 100.0 30 .................................... ACTGTGCTGGACTAGTAAATCTATACTCCT 1576450 36 100.0 30 .................................... GGAGGAGCTAGTTTAACGCAGACGTGGGAG 1576384 36 100.0 30 .................................... CCCCGCCAACGCCGCCAACAAGGTTATTAG 1576318 36 100.0 31 .................................... AGGCGGCCGAGGGTATCAATATCGCGCCGGT 1576251 36 100.0 30 .................................... TATCTTCTCAACGATCGTGCCGCAAATGGA 1576185 36 100.0 30 .................................... AAAAGCTTTTGCTTTTGTGCGATTAAGTCA 1576119 36 100.0 30 .................................... CGCGTCGTGTTATCGTCGGCGCGTGTCAAC 1576053 36 100.0 30 .................................... TAGTCTGCATATCAATACCGGCGTTGTTAG 1575987 36 94.4 0 ..............................A.A... | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.7 30 GCTTCAGATGTCTGTCATTTTAATGAGTTCGAGTAC # Left flank : AAACCATTGCGGCAATTGTTAACACAACATTTAGATGATTTACAGTTACGCGAATTGTATGAAACGGATCGAACTATACGTCACATTGTACAGCGGGTGTTATTTGAGAATGATTTGCCGGGTGAAATTGACACTGAATGGAATATTTCAGAGCTCTTGAAGTACTTGAAGTTACGCGTAGAACTCCCAGAAACACACGGATTTTATGGTATAATAGAAAATATTATTGATCTTTCCCAACGCCTGAGTGATGACAGGTTATTGGTATTTGTTAATGCGAGTGTTTATTTGCGTGATGAACAAATCAAGGCACTTGCATACGATGCAATGTTGAAACAAGTCTCGTGCCTATTTATTGATAGACAGACCACCGTTAATTTTATTGGTGGCAAGGGATTGAAGCAGATTTTTATTGATCATGATTTCGTGCAATTTGTGAGTGATGACACAAAAAACGAATAAATGTTTGATAATATACGTTGATTACGAACAACTGGTCT # Right flank : AAGATACACAATTAAAGAGGTAAATAATGGATAAACTATTGACGTTTATTTTGATAATTACCGCGCCATTTATCGTGATTGGCATTGTCTATTTATTTGGATGGCTTCTTACTGGGCTTATCATGTTGTTTGGTGTGAGTTATGCAAGCGCAAGGCTTGTAGGCATTGCTTTAGCGGTGTTGATCAGTTTTTGGTTTATCGGTTATCAGGGACTTAAGTAAATGGCCTTGTATACCATCATAATGAACACATAGCCAAATATAAAATCCCCCCACACGCTAATCCGTGTGAGGGGATTTTTACTAGACAATATAATCCGCGTACAACTTGCGTTCCAACTCGGACAATTCAACGGTAATCAGCGTGCCGGTCTCATCATAGTCCTCTTTGTTAAAGGTATGCTTAGCGGCGAGCTTGGCTTGCACAGCGCCTTGGTCAAATGGGATGTGGAGCGTGACTTCTTGGACGTCGTTGAAGATTTGCTTCTTGATTAAATCAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTCTGTCATTTTAATGAGTTCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //