Array 1 83762-85117 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOGF01000005.1 Streptococcus equi subsp. zooepidemicus strain NVSLVA-S2 contig005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 83762 32 100.0 33 ................................ CAGGATTGACTGGTAAACAATATCAGAAAAAGG 83827 32 100.0 36 ................................ TCCTTTGCTTTCTTCAAATTGTTCCAAGATATTATC 83895 32 100.0 33 ................................ AATGTCCTTTTGTTGTCCGAGTCGTTTTATCCT 83960 32 100.0 33 ................................ TACGATTAGAGGGGGGCTAGATCATGAATAATA 84025 32 100.0 35 ................................ AGTTGAGTTTTGGAAACGATTTAGAAAATGGGGAG 84092 32 100.0 34 ................................ GATTTTGGCTCTGATAAAGTTAGCGTCTAAGCCG 84158 32 100.0 33 ................................ TCGGGGTATCCCTAAATATGCTCATGGTGTGGG 84223 32 100.0 33 ................................ CAAACGCCGTGACGCAGGACTTACTACACCTAA 84288 32 100.0 34 ................................ CTAACTGGATGCGAGAAAGTAATCGAATAATGCA 84354 32 100.0 35 ................................ CTGAGATTGATATCCAAAAAACAAAATCCAATGCC 84421 32 100.0 36 ................................ AAAATATGTCGCCTCAGATAAAACCCAGTCTGGGAG 84489 32 100.0 34 ................................ ATGGTTAATGTCCAAAAATTAAAAGGTGTGATTG 84555 32 100.0 35 ................................ TAAAAAAATGCAGGCCAAGATAGCACAAAAAAACG 84622 32 100.0 35 ................................ AAATCAAGGGTTGAAAACTTTGTAATTTTTGGCAT 84689 32 100.0 34 ................................ CATTGAATCGCCAGCTACTTTTGCAATAGTATCA 84755 32 100.0 35 ................................ AGCTTTTAATAAGTTGTCAAGACTAACAGTACCAT 84822 32 100.0 33 ................................ GTGTATCGCAGACATGCATTGCCTTGCGTTTCG 84887 32 100.0 33 ................................ TGCGAGATTAACTTACTGCACATGGATTTTATC 84952 32 87.5 36 ........C..TGC.................. CTAAAAGACTTTCTGATTTTAACCAACCCTGACAAC 85020 32 84.4 34 ........CCAT.C.................. TAAAATATCAGCGTACTCAGACATCACACGTCTC 85086 32 84.4 0 ........CCAT.C.................. | ========== ====== ====== ====== ================================ ==================================== ================== 21 32 97.9 34 GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT # Left flank : TAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTATGTGTTGATTATGGCCAGCGTGTGCAGCATTCAGTATTTGAGTGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATATGGAAATGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCTTACTTCTGTAAAAGGAGCGAGTGCGAGCCTGGATTACTCATAAAATGCTGGGAGGCTCGCGCTAAAATAAGCTAAAAAATGGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCGCA # Right flank : TTTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGCTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGTCTTCTCTTTTGTCATGTTCAAAGCAAGCATAGATAAGTTTCTTGAAATTGTCAAAATTTATGTACCTAAAAGCATTGCATTTGATGCCTTTGATAAATTTGTTAGTCGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATTAAGGTGTTCAAAGCTGTTTTGAAGGGGTGATTGAGATGAGGCATAACTCAAAGAAGAGCTCTGTATTCTTTTCTTGCAAATGAAAAAGAGGCAGCTGATAAAGGTCATAATAGCC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //