Array 1 11081-11433 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPBB01000009.1 Campylobacter hyointestinalis strain ATCC 35217, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 11081 30 100.0 34 .............................. TTAATTGATGATTTTTATTTTCTTTGTGAAATCT 11145 30 100.0 34 .............................. TTTTGCTGATTTGTTAGACTTCCCCTTGAACTTC 11209 30 100.0 35 .............................. CTATGGGATAATTCTATAAGCCCGATGTTACTTGA 11274 30 100.0 35 .............................. CTTTTGGTTATGGAGAAAAAGAGGGAAAAGAGGTT 11339 30 100.0 35 .............................. ATGGAAATGTTAGATAATAAAAACGTCACAACAAA 11404 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 6 30 100.0 35 GTTTCAAATCCTAAAAGGATAAATTTATAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA # Right flank : CATTTCTATTTTGTAGGTCATATGTGATTTTTGATAGTTTCAAATCCTAAAAGGATAAATTTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATGTTTCAAATCCTAAAAGGATAAATTTATACATAGCACTGTCTAAGCCGTTCATTTTAGATTTTAAGGTTTCAAATCCTAAAAGGATAAATTTATACTTATTTCAAATTTAGCCGATTTTTATTTGATAGTGGTTTCAAATCCTAAAAGGATAAATTTATACGATACTGTCTTGAATTTCACGTGTGCAAAGTATCCTGTTTCAAATCCTAAAAGGATAAATTTATACTCCTTAGTTTTGATTTTGTGTAGGGCTTGAAAAGGTTTCAAATCCTAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAATCCTAAAAGGATAAATTTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 14249-15315 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPBB01000009.1 Campylobacter hyointestinalis strain ATCC 35217, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 14249 30 100.0 33 .............................. GCGGAAGTATATCAATGACAATCAAGAGAGAAT 14312 30 100.0 35 .............................. TAAAATGACAAAACAAGACTTTCAAGAAGTATTTA 14377 30 100.0 35 .............................. CAAAACGATATTTTAGAAATATCACAAGGGAGTTA 14442 30 100.0 37 .............................. TTTTTGATGATACCTCATCAGCTTTTTTAAAACTTTC 14509 30 100.0 35 .............................. GAGGTATGCCCCCTTTGTGGCGTTAAGTTGATAAA 14574 30 100.0 35 .............................. ACAGATAAAATAGCACTTGTGGATTATGAAAAGGC 14639 30 100.0 34 .............................. TTTATTTGAGGTTGTCCTCTTTGTTTTGATAGAG 14703 30 100.0 34 .............................. TCGATATATTTACGCTTTTATTTAAGCAGGTGGT 14767 30 100.0 34 .............................. TTATTCAGATAACGACACAATACCATTTTAAGGA 14831 30 100.0 35 .............................. GGTATCATCAAAAAGAGATTTAACAGTGCAAAAAA 14896 30 100.0 35 .............................. AAGTTTTTCTTTGGATAGTTGAGGTTCATTAGTTA 14961 30 100.0 37 .............................. TGGTTGAAGCACTTGGCGGTTGGGTGGATATTTGCAA 15028 30 100.0 35 .............................. GGCAAGTTTGAACCAAAAACGCCTATGACGATGCT 15093 30 100.0 34 .............................. ATGATATAAAAACTCTTATCAAGCTTTTAGGTTA 15157 30 100.0 34 .............................. GAAGTAAAAAGAGACGACGAGGCTATTCAAAAGC 15221 30 100.0 35 .............................. AATGTCAGAAAGACCGATATTGCGCAAGTAAATAG 15286 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 17 30 100.0 35 GTTTCAAATCCTAAAAGGATAAATTTATAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAAATCCTAAAAGGATAAATTTATACTTAGCTCTCTATCAAACACAAAATACAGAAATTGTGA # Right flank : CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAATCCTAAAAGGATAAATTTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 3 16861-18397 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPBB01000009.1 Campylobacter hyointestinalis strain ATCC 35217, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 16861 30 100.0 35 .............................. ATGGAAAAACTCTTAAACGACTTAAGAGATGTCCT 16926 30 100.0 36 .............................. TGAAGCTGAAATGACTGAAAGTGAAAAAATAGAAGC 16992 30 100.0 35 .............................. GTTGGCGGATTAGCACCACTTCCTACGAAAATGCA 17057 30 100.0 34 .............................. TCTCTAGCATAGTGCCTTTTTCGCCTATAAGAAC 17121 30 100.0 36 .............................. AATCTCAATGGATGCTACCTACCGAAGCAGAATATT 17187 30 100.0 35 .............................. ACCCCTTTACTTGATAGGCATTATCAGCTATTGAT 17252 30 100.0 34 .............................. GCAGATTGGGGCTTTGCAAACGACCCTAACACGC 17316 30 100.0 36 .............................. AGATAGCAAAAATGATATAAATAGCCCTTGCGAAAA 17382 30 100.0 35 .............................. CAATCATTATTAAGCTCAAAAGCTCCAAAGAAAGT 17447 30 100.0 35 .............................. TGGGACGAAGATATCAAGCAAGGCGTTTTAAGCGG 17512 30 100.0 37 .............................. GCTACACTTCGCGGATATTTAGCAGGTGCGAAAAAAG 17579 30 100.0 35 .............................. TTCAAAACAATCAGTCTCACAAAGCCTAAAAAAAC 17644 30 100.0 35 .............................. TTTAGAGGGTGGGAATAGTGCGTTTGGTGAGTTTT 17709 30 100.0 36 .............................. GGTTACTTTAGGCACACAGTTCTATTGTTCTGCGAA 17775 30 100.0 39 .............................. ACACACTCATACTCATCATTCAGAATTTCACAAAGAAAA 17844 30 100.0 36 .............................. ACGGAAGCACAAAAATAGCAATGGAAAAAGGAAAAA 17910 30 100.0 34 .............................. TTTAATAATCCATATGTTTTATTATTACCATTAT 17974 30 100.0 37 .............................. ATGTTTGCGTAGATGGCGGAACAGATGAAGAGATAGC 18041 30 100.0 34 .............................. TGAGAAAATATAAAGTATCACTAGGCACGGTGAA 18105 30 100.0 37 .............................. TGGCTTCTTTAAAAAAAATCAATTCAAAACAAAAGGA 18172 30 100.0 34 .............................. TTGGCATCGCTGATAGTTGCATCGGCTTCCTTGA 18236 30 100.0 34 .............................. TTACATACCTTAAAAAACTTTTTTAGTTATTTTA 18300 30 100.0 38 .............................. GTGGTTACTTTAGGCACACAGTTTTATTGTTCTGCGAA 18368 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 24 30 100.0 36 GTTTCAAATCCTAAAAGGATAAATTTATAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTGTTTCAAATCCTAAAAGGATAAATTTATACCTAAGAGTATTTTTTAAAATATAGATATATATTTT # Right flank : CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAATCCTAAAAGGATAAATTTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [85.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //