Array 1 1794772-1795664 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP076675.1 Riemerella anatipestifer strain XG19 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
   1794772	    47	 100.0	    29	...............................................	CTATTTTGTTTTTTAAGTGTGAATTGTGC 	
   1794848	    47	 100.0	    30	...............................................	TTCTACAAAGTCTAGCCACGCACCCATAGC	
   1794925	    47	 100.0	    30	...............................................	ATATCACGAAAATTTAAAGTTTAGCGACAC	
   1795002	    47	 100.0	    30	...............................................	AGCCTCTAACTCATACGCACAGGCACAGGC	
   1795079	    47	 100.0	    30	...............................................	CGACAACTTTTTTTGGGTGGCGCCGCCAGA	
   1795156	    47	 100.0	    30	...............................................	TTTCGTACATAAATTACGCCTCGTGCGTGT	
   1795233	    47	 100.0	    30	...............................................	TCTTTATACTAAGAGCATTTAGCAACAATA	
   1795310	    47	 100.0	    30	...............................................	TATTTTCCAAACAGGCGATTTGGCGGGTTA	
   1795387	    47	 100.0	    30	...............................................	TTTATCGCTAAAATTATTAAGGGCAGGAAA	
   1795464	    47	 100.0	    30	...............................................	CCACCAGTAGGGTGGATGAAGAAACTGAGG	
   1795541	    47	 100.0	    30	...............................................	AAACATCCATCAATTCATTTTATAATTCCA	
   1795618	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
        12	    47	 100.0	    30	GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC	                              	       

# Left flank :   ATCTTTGTGGTAGTTTGTAGCTTAAATTTATTTTTTATGAAGTTAGATTTTGAGTTCAAAATCAGTTTATGAAAATGAAAAAGGTTTTAAGTTTGTTGCGAAACTTAAAGCCGAGATGAAACAGAAAATTCCCAGTCTGTTATATCCTGAAACAAAGGAGGCTTTGTCCCCCTTACTTCTAAAGGCAAATTTAGAAATATTTTTTCAAATGAAAGAATTTATAAAATTGATTAAAAATATTTTCTCGAAAGAACCATTTGAGCAAGATATAACTATTAGATTTAGTTTATCTTTAGAGCAGATAATATTTATTTTTTAGCTTTAGCAGGAATGATATACATCTTCTTAAAATAATATTATGAAAATAGAAGATATACATACCTCGTGGATACAGGAACAGATAAAAGAGCTAGGTATTAAACGAAAAGACCTAACAAAAGACCTGTTACTAGATAGAAGTTATTTAAGCCATCTGTTTTCTAGTGATGACAAACCGCATA
# Right flank :  CCTCAAAAAATAAACCCGTTGTTTTTCAATGGGTTTTGCTTTTTATTAGGATTAGATTTTTCACTATTTCTTGTCTATTTCTACTTTAGTAAATCCTTTTTTCTGTTTCTAAAAAAGTTCTAATTGCTGATAGGTTGGTTTGGGTTCTTCTTTAGCTCTCGCAAAGAAAATTTCTATATCTCCAAACTGTTTATCTGTAATACTCATGATAGCCACCTTACCGTGCTTGGGAAGTATTGATTTTACTCTTTTGATGTGTACTTCTGCATTTTCACGACTTGGGCAATGCCGTATATAAATGGAAAATTGGAAAAGACTAAACCCATCGTCTTCAAGCCGTTTTCGGAATAGCTGAGCCGCTTTACGCATCGCTTTGGTTTCTGTTGGTAAATCATATAACACCATAACCCACATAACTCGATAAGCATTAAAACGATTAAACTTCATAAAACTCAGGCACAGATAGTTGTCTTTTTTCTCCGGTATAACATTTATAAACA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:68.09%AT]
# 	Reference repeat match prediction:         F [matched GTTGTGAATTGCTTTCAATTTTTACTATCTTTGTGATAGTTCGCAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.70,-6.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,4.5   Confidence: LOW] 

# Array family : II-C [Matched known repeat from this family],   
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