Array 1 192209-196136 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEHQ010000031.1 Klebsiella pneumoniae isolate S_1826, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 192209 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 192268 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 192329 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 192390 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 192451 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 192512 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 192573 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 192634 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 192695 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 192756 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 192817 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 192878 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 192939 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 193000 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 193061 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 193122 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 193183 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 193244 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 193305 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 193366 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 193427 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 193488 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 193549 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 193610 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 193671 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 193732 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 193793 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 193854 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 193915 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 193976 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 194037 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 194098 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 194159 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 194220 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 194281 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 194342 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 194403 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 194464 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 194525 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 194586 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 194647 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 194708 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 194769 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 194830 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 194891 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 194952 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 195013 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 195074 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 195135 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 195196 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 195257 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 195318 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 195379 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 195440 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 195501 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 195562 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 195623 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 195684 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 195745 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 195806 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 195867 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 195928 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 195989 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 196050 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 196108 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //