Array 1 295273-291402 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUA01000005.1 Alcanivorax sp. 24 contig00005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 295272 28 100.0 32 ............................ TGTTTGACCACATTTCACGGGGGGGACTTCTT 295212 28 100.0 32 ............................ CCGGTGTAACTCGAGGCGAAAACTGTAATGTC 295152 28 100.0 32 ............................ TCGACCCCGGGGGGCCATAACCGTCGCAATGC 295092 28 100.0 32 ............................ GAGACTCCCCACGGCCCGCGCTTGAAGGCTCT 295032 28 100.0 32 ............................ GTTGCCGCTTCGGCATTAATCGCGTTGCCGTA 294972 28 100.0 32 ............................ ATTACAGTTTCGATGAACGCCGTTGCCGCTTC 294912 28 100.0 32 ............................ AATTTGCAGCAGCGATGAAGGCCAAACTGACG 294852 28 100.0 32 ............................ TTTCGTCAACATCGCCTGGCGCGATATGCCCG 294792 28 100.0 32 ............................ AAAGACGACTGAAGGCGCGCACTGCTGGATGA 294732 28 100.0 32 ............................ TCGCGGAGCATCGTCGCAACATGCCGGACACG 294672 28 100.0 32 ............................ AAGCTGCACGTGTGGAGTTGGATCCTGACCCA 294612 28 100.0 32 ............................ CGCGGGCGTAGTCATGAATGGCGGCCTGTATC 294552 28 100.0 32 ............................ AGGACGCAGCAGCCCCATACGCGCACGGGCCA 294492 28 100.0 32 ............................ ACAACGGCGGCAGCCTCATTCAGCAGCGCCGA 294432 28 100.0 32 ............................ ACGGTCAGCCCCCTGGTCAGCAACATCCCTGA 294372 28 100.0 32 ............................ AGCTCAGGAACATATAAATGGGCGATTATGGA 294312 28 100.0 32 ............................ GCGTCTTACCGTCCGATTCACGCTAAGTCATT 294252 28 100.0 32 ............................ ACCCAGGACAATAACGCTGTTTTTGTTGAACG 294192 28 100.0 32 ............................ AGAGCCAGACGCCGCGCCTCGACCCTGAGCGC 294132 28 100.0 32 ............................ TTCAGATCATCCGCTTGGGCCAGCTCTTCCTG 294072 28 100.0 32 ............................ TATGTCGATCACATGAAGGCGGCTGGCAGGCG 294012 28 100.0 32 ............................ TTTGAGTCGCGAACCAGAGGTCCCCAGGTGGT 293952 28 100.0 32 ............................ GATATCCGGCCTTTGAACCGAGCCGATAGCTC 293892 28 100.0 32 ............................ ACTCTGCTGCGCTGTCAGCACTCAAGTCATCG 293832 28 100.0 32 ............................ GTTGTTACGCGCCCACCGGCGCAAGTTTGCCA 293772 28 100.0 33 ............................ AGATTGAGACGGCACTTCCCGGGTGACCACGAG 293711 28 100.0 32 ............................ CTGCTGATCACGGTGACCATCGACGCCCCGGA 293651 28 100.0 32 ............................ AGGGGCGTGGGGGTGGCGAGTGATGTTGATAC 293591 28 100.0 32 ............................ TCTCGGTGCGGCACTATCGGATCGGGGCGCCA 293531 28 100.0 32 ............................ GCTTCCCGGCTACGCGACCGCATGAATGGAGG 293471 28 100.0 32 ............................ CTCATATGGGGAAGCGGGGCGTCTGGCGGGGC 293411 28 100.0 32 ............................ AAAAATCAGAGCGACCGCCAGCATCAGGGCAA 293351 28 100.0 32 ............................ CGATCCGACCGGAGTGAAACGGAGGCCTGCAC 293291 28 100.0 32 ............................ GCAGTGCGGACAGGAGTTCTCCAGCTGATCGG 293231 28 100.0 32 ............................ CGGTCGCGGGATCAATGCCGGCCTGGCCGCGT 293171 28 100.0 32 ............................ AAGGACATCGTCACTCAAGTCCCCACCATCGC 293111 28 100.0 32 ............................ GCAAAATGGTGTCTAGAGCAGGCTGGGCACAA 293051 28 100.0 32 ............................ TTGGAACGAAGAGGCATTCACACAATGGCTGG 292991 28 100.0 32 ............................ GACTACCCCCGCGCCACCTGTTTTTGCAACAT 292931 28 100.0 32 ............................ TACGGGCGCATGCCGAACAGCACGGCCACCGG 292871 28 100.0 32 ............................ GAGCACGTATGGGGCCTGTCCGGAACACCGGC 292811 28 100.0 32 ............................ AATTGGCTTCCCGGTCGATGGCGCCAATGTCT 292751 28 100.0 32 ............................ AGCAGCCCATGCAGGCGATCAGCGATCTGATC 292691 28 100.0 32 ............................ TCCCCTGACCGCGTGACCCCAGTCCCGCCCCC 292631 28 100.0 32 ............................ TGATAGACGAGGGTAAGTCGCTGAATGATATG 292571 28 100.0 32 ............................ TGCCCAGTGTGGACGTGAGATAAAATCGCAGC 292511 28 100.0 32 ............................ TCACTATGGAAGCGACCCAGTCAGCCATTCTC 292451 28 100.0 32 ............................ AGAAATCTGACGGAGCAGACGGGGATAGAGAC 292391 28 100.0 33 ............................ TGATTCAGGTCCCGAGCCGCATCGTTGAATTTC 292330 28 100.0 32 ............................ ACCACGAAGCCGAACAATTCGCCGCTTGGATC 292270 28 100.0 32 ............................ AGATTGGGTGACGGTATGTCGCGCTTGGCCAT 292210 28 100.0 32 ............................ TCTCTGTCGCTACGAATAGAATCCGCCAAATC 292150 28 100.0 32 ............................ ATAAGTAGAACAGAATACCCAAGCTCTCTGAG 292090 28 100.0 32 ............................ AGGAGGAGGTCAGGCACACCGCCGACCTGGAC 292030 28 100.0 32 ............................ TTCTGGAACGCTTGGAGGCGCTGGAGAAAGGC 291970 28 100.0 32 ............................ ACGTAGAACTTTCGGTCGGCACGGCCGTTATC 291910 28 100.0 32 ............................ TGGCAGCCGGGAATATTTTCCTGACGGTTCAG 291850 28 100.0 32 ............................ ACGCGGCGAATGAAGCGTTGCAGGCCCATGTC 291790 28 100.0 32 ............................ CCTGGATCGCCAGGTTTTGCAGGCCGGTGTTC 291730 28 100.0 32 ............................ ACCAGTCCATCGTCTTGGCGAACAATGGCCTG 291670 28 100.0 32 ............................ AGAGAAATCTACTGGAATATCTGATGGATGAG 291610 28 100.0 32 ............................ TCTACGAGATCGGCGCCGAACATGTCCTTCGC 291550 28 100.0 32 ............................ TGCTCGAAAGTCGCGTCCTTCGCGATAGTCGT 291490 28 100.0 32 ............................ TGAACCGGATCGGTTTCCCCTTCTTATCAAGG 291430 28 89.3 0 ....................GG.....G | G [291406] ========== ====== ====== ====== ============================ ================================= ================== 65 28 99.8 32 GTTCGCTGCCGCGCAGGCAGCTAAGAAA # Left flank : CGGCTCTGGATCATTTAATGAGTCAAGATTGTCTGGCCGGCATGCGTGACCATATCCAAATGACAGGGTTGGCTCCGGTGCCAGGCAATGCCAAGCATCGTGTGGTCCGGCGCCGCCAATTCAAGACCAATGCGGAACGTCTCCGGCGTCGCCGGGCGCGGCGTCACGAGGAAACTCTGGAACAGGCTCGGGAGCGAATCCCAGACACGGTGGAGCGCAAGGTTGATTTACCCTACGTGACGCTGCGTAGCCAGAGCACGGGGCAGCACTTCTGCCTGTTTATAGAGCACGGTGACTTGCAGGTACATCCGGTAACGGGCCGCTTCAGCCGCTACGGTCTCAGCCCTACCGCAACGATACCGTGGTTCTGACCCTTTTTTTGATTCCAATTAATACTTTCCTAAAATCAATAACTTACGTCACGCTCCAAAATTTGGGGTGTGGCGCTTCTTTTTAGCCTTGTTCTTTAAAAATCAGGGAGTTAGATTCGTTTGGTTCTA # Right flank : TGCAGGCCATGTTTATTGATAGTCATAAAGACGTCTGCTTTGAAGCAGGGGGTGAGTCAGGCCGCCAGGGAGGGGGGATCCTGAAGGCAAGAGTTGAGGCCGGTATCATTGCCCTTGGACCGCCCCCACAAGGCGATCTTGTGAGAGCGGTGAGGCAGAGTGCCTGATTAACGATACCGGGCCAGTTCCAGCCGGCCGATTTGATTGCGGTGGACTTCGTCGGGGCCGTCGGCCAGGCGCAGCATGCGGGCGTTGGCGTAGGCTTTGGCGAGGCCGAAGTCGTTGGTGACGCCGCCGCCGCCGTGGGCCTGGATGGCCCAGTCGATGACCCGGGCGGCCATGTTGGGGGCGGCCACTTTGATCATGGCGATTTCCTTGCGCGCCACTTTATTGCCGACGGTGTCCATCATATGGGCGGCGTTGAGCACCAGCAGCCGGGTCTGGTCGATGAGGATGCGGGATTCGGCGATGCGTTCCAGGGTCACGGTTTGTTCGGCCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGCAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTAAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //