Array 1 14065-17706 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXN01000017.1 Oceanithermus desulfurans NBRC 100063 sequence17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 14065 29 100.0 32 ............................. CTCCCCGCCGTCCCCAGGCGTCCAAAGCCCAA 14126 29 100.0 33 ............................. CTCTACACGGGCACCGAGCCCAGCGTGGACGCG 14188 29 100.0 33 ............................. GCGCTCAGTACCAGCAGGTAGGCATCCCGCTAA 14250 29 100.0 32 ............................. ACGCCGAAGCGCCGGGGCGGCTCGAAGCCGCC 14311 29 100.0 33 ............................. ACGCCCTTCGAGATCAACGGCCTCATCGACGCT 14373 29 100.0 32 ............................. TGCGCGGGCTCGAGAACATCCGCGTGGAAGGC 14434 29 100.0 33 ............................. GCCGCACTCCTCCTCGTCCCAGTCTTCCCAGTC 14496 29 100.0 32 ............................. AGCGGTGCAACACCCGGCGAGGCCGTAGAGCC 14557 29 100.0 33 ............................. AAGGTGTTCTCTGGGTTGGTGTAGAGCCGCCAC 14619 29 100.0 32 ............................. GACAGGTGCGCGAGCTGGATCAGGAGGCGCGG 14680 29 100.0 32 ............................. CCGCCCCGCGCCTGGTCGACCCGGCCATCCGC 14741 29 100.0 33 ............................. AGGTCGCCGATCTCGACGTCGACGGTCTTGAAC 14803 29 100.0 32 ............................. TCGTACCGGGGCCCGTAGGAGGTAGCCGAGCC 14864 29 100.0 32 ............................. GTGCTCGCCCCGGCCCTCAAACTGCTCACGCC 14925 29 100.0 32 ............................. GCCCTGGCCGAGTACGAGGCCAAGCACCCCAT 14986 29 100.0 33 ............................. TTTCCCCGGGCTGGGCATGCTCGGCCATGTAAC 15048 29 100.0 31 ............................. GAGACGCGCGAGCTCCGGGCGGGCGAGTACC 15108 29 100.0 32 ............................. TCGCCACCCAGTCCAGACGTGGAACGTGTTAC 15169 29 100.0 32 ............................. GCGCCGGTAAGCCCACTCTTCCAGGCGTCTAC 15230 29 100.0 33 ............................. TAGGAGGGACCCTCGCGAAACTCCTGACGCCCC 15292 29 100.0 32 ............................. TTTACCGCCTTCTTAGTTACACCCGGCTCCGT 15353 29 100.0 34 ............................. CCCGGGTACCGCATCCGCTTCCGCGACCGGCACC 15416 29 100.0 32 ............................. AAGGAGGGGTAGACGATGTACCTCGTCTACCC 15477 29 100.0 31 ............................. ACCCGGGCCGAGACCATCCGAGCCAACCTGA 15537 29 100.0 31 ............................. GTGACTACATCGTCCGCTACGACCCGCGCAC 15597 29 100.0 32 ............................. TAAGCCCAAGGTGGACGGCCCCCGGGAGGTAT 15658 29 100.0 33 ............................. GTTACGAATGTCATGGCCCTTCCGACCACGAAC 15720 29 100.0 32 ............................. AGTGGCTCGAGCGGTTCGGTGGCAGCCCCAAA 15781 29 100.0 32 ............................. GAGGGAGTTTCGATCTTTGCTCCTGAGGAATC 15842 29 100.0 32 ............................. GCAACGCCCCAACACCCGCGAATGCGGTGAGC 15903 29 100.0 33 ............................. GTTCTTCGGCGCAGAGTTCGCCGTTACCGCCAC 15965 29 100.0 32 ............................. ATGGGCAACGTCATGCCGTCGGCTGTATCCAT 16026 29 100.0 32 ............................. GTATGCCTGGGTTTGATAGCTGGGTACAGACC 16087 29 100.0 32 ............................. TCGATGGTGACCGCAAACTCGCCACTTTCTGT 16148 29 96.6 32 ............................C CTACCGGCTACGATTGCCGTGAACACGGTTTC 16209 29 100.0 32 ............................. CGAGCTGCTGGACGTGTCGCTGGTGCCCATCC 16270 29 100.0 32 ............................. CTACCGCCAGCGCCAAAGCGTCCGCCAGGTCA 16331 29 100.0 33 ............................. TTTGGGGATGCTGAAAGCCGTTACCACAGTCGG 16393 29 100.0 33 ............................. AGCGTTTTCTCACTCCAGGTCGCGCAGCACGCC 16455 29 100.0 31 ............................. ACGTGGGCGGCGGCGTGGGTGCGGTTCCTGC 16515 29 96.6 32 ............................C GAGGGCCGTCACGGTTTCATCCTCCGCCCTCA 16576 29 100.0 31 ............................. CCACGTCACGAAAGGATTCGCGGGACTGCAC 16636 29 100.0 32 ............................. GGTTGAGGGCGGAGAGAACCCCGCGCACGCCC 16697 29 100.0 32 ............................. GTGATTGGCCCCGCCGTCGCCGGCCTCGGAGC 16758 29 100.0 32 ............................. ACGCTGGGCGCGAGAAGGTGGAGGTCGTCATC 16819 29 100.0 33 ............................. GATTTAAGGATTACGTGCAACTCATACAATCGG 16881 29 96.6 31 ............................A GGTGCCCTCGCCCATCGTCGTTTCCAACTAC 16941 29 100.0 32 ............................. ACGAGTTCCGGCAGCTCCCGCCGCGCCGCCTC 17002 29 100.0 33 ............................. GCATGGCTACCTTGCTGCCCGCTCACGCACATC 17064 29 100.0 32 ............................. GCAGGCTCGAGCGCCGTCAAGATCGGCGTCAG 17125 29 100.0 33 ............................. ACCATCATCTGGGCATGCGCCTGGAAGGCGGTG 17187 29 100.0 33 ............................. GGCGGCGCGCCACGGCTTGAGGTCGCCCGTCAT 17249 29 100.0 32 ............................. ACGTTGCCGTAGCTGGTGCGGATGGCCGTCAC 17310 29 100.0 32 ............................. AGTGGGCGTTTTAGGGGGGAAGAGATGATGAC 17371 29 100.0 31 ............................. TCGAAAAAGCGCCTCATTGACACGGCAAATA 17431 29 96.6 33 ............................C CCAGCGTACATTGTGCAGAAAATCCTGGCCGCC 17493 29 100.0 33 ............................. TCTGCATGTTGCTAGGAAGGGTAAATTGCGTAG 17555 29 100.0 33 ............................. GGCGCCACGAAGGCTATCATCGAAGGCGCGGAC 17617 29 100.0 32 ............................. GTGCCGAACGAACGTCGCTGCTGATGAGCTGC 17678 29 96.6 0 .........................G... | ========== ====== ====== ====== ============================= ================================== ================== 60 29 99.7 32 GTTTTCCCCGCGCATGCGGGGATGAACCG # Left flank : AGCTGGATGCCGAAGGAGAAGAGGAACTGGACCCTCTGACCGCACTTTGGGACCCGTGCGGCGAAGTGGAAGGCGGCGTGGCTTATGGTGGTGATCACCCTGGAGAAGGTGAGCCGGAGTCTGCGGGGTGAGCTGACCCGCTGGCTGGTGGAACTTGACACCGGTGTGTTCGTAGGGCGCGTCAGCGCACGCGTGCGCGAGCTGCTTTGGAAGAAGGTGGTGGAAAAGGCGGACGAAGGTCGTTGTACCATGGCCTGGAACACCGCCAATGAGCAAGGGTTTCGAATCCGAATTCACGGACACGAGGACCGGTGCGTACATACAATAGACGGTGTGGAGCTGGTGGCCGTGCGCAACGCCAAGTGGAAAAAGGTGTGGAATCAGCACCTGCGCTGGCTGAAACGGCGCGGCTTGGTCGAGGGCCCGGTCGGGGATCTTGACAAGAAAACCCTCGACCCTTCCGAGGGGTCGGGGCGGTAAACTGTTCGAGGGAATCAAGT # Right flank : GCTCGAGGCGCCCCAGCGCGCCCCGCGGAGAATGCGCGACCGCCTGTATTGGGACTTTAGCCTACAAGTAGCCAAGCGAAAGACCGACCGCGGGAACATCCTCAGGGTGTATTTTCGCGAGGAATACGGCGTGGAGACGATTGTTTTAGTAATCACCGTCTACCGCACGCGCGGCTGGGGAAGGGGTAGAATGAGGCGATGAAGCTCGAATTCGATCAAGAAGCCGATGCGCTTTACCTGCGCCTCAAAGACGGTCGGGTCGTGGAAACCCGCGAGGTCCAGCGGGGCGTCTTCGTCGATTACAACCGGCTGGGAAACCCGATCGGAATCGAGGTTCTTGGCGTCAGCAAGTACACGAAGGGCGGGGAGTTGAAGCTGCCCGACAGGATTCTGCGCCTCGCCTACGCCACGAAGACGGCCTGATCGGCCCTCACTCTTGAACCCCGCGCGTAAACCCCGCGCGGGGTTTACTGTAGCGTCTCCGACCTCGCCCCGTTAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGCATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //