Array 1 683-863 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYXE01000161.1 Candidatus Chloroploca asiatica strain B7-9 NODE_638_length_3494_cov_86.686_ID_199743, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 683 37 97.3 35 ...............................G..... TAGGGCGTTGGGCAGGTGGTTGGTTGGCGTCACCC 755 37 100.0 35 ..................................... CGGTGTGGTAGACAGGCGGTTGATTGGCGTCACTT 827 37 94.6 0 .....T............................C.. | ========== ====== ====== ====== ===================================== =================================== ================== 3 37 97.3 36 CGCCCCGGTGGTGCTGGTTGCGTGGGGGACGATCAGG # Left flank : CGATTCATTGGTACGGTGGTTTTTTTGACGCAAAGGCGCAAAGGCGCGAAGGTGCGTTTGGAGATCCATCACCCCTTCGCGCCTCACAGAAGCTCACGCGAAGGCGCGAAGGGGTCGCGTACCGGCGCGACAACCGGTGCACCGGTGTGCTTTCGCGTCAACACGGGTCAATCGGATGGGCACGGTCGTGGGGCGAGTTTATGGGTGTCCTCTCGTTCGGTGATGGCCGGGTTCATCGGTCTGGGTGATGTCTGCGATGGTGAGCCCGCTGGCGTCGGCGAGGGTCGCGGCGGTGATCGGGATCGAGCGCATCGTGAGCGTTGCCAGGTCGAGGGCGGTTTCGAAGGTGGTGATGCGTCGGGCGCTGATGAGCTGGTGGAGATACTGGGCGGCGATGGCGGCCATGGTCTGGTTGATCATCAGGCTTTGCAGGCCGTCGCGCATGTCGACTGCACAGTCGCCCTGGGGCTGGTTGGGCAGTCGGCTGGCTGTTGCCACCC # Right flank : GCGGTGTGGTGGGCCGATGATTGGTTGGCGTCACCCCGCCCCGGTGGTGCGCGTCGCCTGCCCGTTGGTTCGCCGGTTCGTCGTGGAGCAGGTGCGGGTAGCGCAGGGTTGGCGCCGGCAGGGCGGTGCAGATCCCGCCGAGGGCCAGGGCGCCGTGCAGTTGGCGCTGCTCGGTGATGGTGCCCAGCAGGACTTTGCCCCAGTCGTGTTCGTTGCCGCTGTCGAGCCAGAGTTGCCAGCGTGAGCGGGCCAGGGCTTCGTGAAGCGCACGCCGTCCGCTGGCGGTGTCGACGGCTCCGACGAGGATGCCGATGGTTTGGGCGGGCGGGGCCAGTTCGCGCAGCAGCGCGGCGGTCGCCATCTCCGGCACGGCGATGATGTCCAGGCCGAGTGCAGCGTTGAGGCGATCGGCCAGGGTTTGGGCTTTGTGGCGGCCCCGTTCGGCGGGGGCAAAGAGTTGACGCCCGATGTTGGGTGCCTCGACGCGGTCGCCGTCGATG # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCCCCGGTGGTGCTGGTTGCGTGGGGGACGATCAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 6019-335 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYXE01000170.1 Candidatus Chloroploca asiatica strain B7-9 NODE_6_length_133978_cov_80.1205_ID_198477, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 6018 37 100.0 36 ..................................... AAAGGATGGCGACACCAGCGGCGAGGTAAAGCCAAG 5945 37 100.0 35 ..................................... CGTCTGCCTGCTGCGTGCCGTGACTGAACAGATAC 5873 37 100.0 37 ..................................... ACGACGGCAGCGTGTCGAGTGTCGAGGCACACCTCGG 5799 37 100.0 34 ..................................... CGTGGCAGGGCCATAGCCGTCATTGCGCTGCCAG 5728 37 100.0 35 ..................................... ACCAATGGCACGCTCACCCCACTGGCCCCAAGGCC 5656 37 100.0 36 ..................................... TGTTGTTCAGCGTGCCGATGGTGGTGCCACTGCCGC 5583 37 100.0 37 ..................................... TCGGGGCGACGATTGCCGGGGCGCCAACGGGCGGCGA 5509 37 100.0 34 ..................................... TTCGAGGCACAGCGCAGCGACGGCGTACATCCCC 5438 37 100.0 33 ..................................... TTGCTCTTGCGGCTCAATCACTTGAACTTGCTT 5368 37 100.0 36 ..................................... TAGTGATATGTTGAGAAAATAGCGCGCCGGCCTATT 5295 37 100.0 35 ..................................... ACCGAGCGCCGCGTTAAAAGCGGCAGAGATTGTCA 5223 37 100.0 37 ..................................... AGATCGTTGTGGGGTCGGGGCAGTGGCGATCTTCGTG 5149 35 81.1 37 A.TT....A.T--........................ AGATCGTTGTGGGCCTTCCACAGCGCCCGCGCCGCTT 5077 37 100.0 35 ..................................... GTCGCGTGCCCTGCCGCCATCAACCCCGCCAGCGC 5005 37 100.0 36 ..................................... TTATTGTTTGCCGCGCTTATTCATGCGTTTATTGAT 4932 37 100.0 37 ..................................... TGGTATCCTGTCAATGCCAATGCCTTGTTTTTTCGAC 4858 37 100.0 38 ..................................... TTACACTGGTATGCTATCTTTGACATCAGGTTATAGCG 4783 37 100.0 35 ..................................... ACAGTCCTCGGAGTGCCAATCGTGGCCTTCCAAGC 4711 37 100.0 35 ..................................... AACGTCGGCTGTGGCCTGGTTCGCCCACGGGAACT 4639 37 100.0 35 ..................................... AACGCCGCGACGCACACCCATTACGATTTCATCAA 4567 37 100.0 36 ..................................... GTAGTAGAAGTCGCCGCCCGTGGGTGCCCCGGCAAT 4494 37 100.0 35 ..................................... CGGAAGCGGAAAAGGCCAGCGACCGAAAAGAAGCC 4422 37 100.0 36 ..................................... CCGTCGCCGGTGCTGTTTGATGCAAGCGGTGAAACG 4349 37 100.0 32 ..................................... GGTTATCATCGAGGCATCAACGCCGGGTGGAT 4280 37 100.0 35 ..................................... CTCTCAAGTTCCTCACAGTAGCGGCGCAGTTCGAC 4208 37 100.0 34 ..................................... CCAGAAGGCTTTGCATCCGACGCCCATCCCCGTG 4137 37 100.0 36 ..................................... AAAGGATGGCGACACCAGCGGCGAGGTAAAGCCAAG 4064 37 100.0 36 ..................................... CCGTGACAGAGGCTCACACAACAAACTACATCACCG 3991 37 100.0 36 ..................................... AGCACGGGGCGGCTTGTTGCCGGGGCCATCTCGGTC 3918 37 100.0 36 ..................................... CAGCGCGGCGCGATCAAGAGCGTGCTGTTGCAAGTG 3845 37 100.0 34 ..................................... ACCAACGCACGCACGTTCAGATCGACGATGGGCG 3774 37 100.0 36 ..................................... GATGTGCCGCAGAGTATGTTGATGCAAGACGCTGCC 3701 37 100.0 37 ..................................... TTTCGTGTTGAGAGCAGGGCAGGCGCGGGTTGTGCGC 3627 37 100.0 36 ..................................... GTCAATGTAGTCATCAATGGCCCCGGCGATCATGCG 3554 37 100.0 35 ..................................... GCTGATACCGCACGCGGGCAAGGTGGCCCTCATTC 3482 37 100.0 35 ..................................... TCCTTAGCGGGTGCGTACCACGCGGATATGAGTCG 3410 37 100.0 36 ..................................... GCAGCAACGGGTCAACCGCAAGCACGGCATTCGCCT 3337 37 100.0 35 ..................................... CACGTGATGCCCTCGATGAGGCGCGCCGCTAACAC 3265 37 100.0 34 ..................................... ACCGGCAACACGTTCGCCGCGCCAAACGTCTGTT 3194 37 100.0 36 ..................................... ACGGCGGTTTCGACGTTAGCCTGCGTGATGCCGTTC 3121 37 100.0 34 ..................................... GACCAACAAGCCCCGATATGCTTCGTGACGCCAG 3050 37 100.0 34 ..................................... ATCAATGACACGATGAACGCAGGCGGCTATCGGC 2979 37 100.0 35 ..................................... CTTTCCGGTGGGGCTCTGAGCGCGGCAGTACCCGC 2907 37 100.0 35 ..................................... TGTTTGATGCGGCCTCCTATGGGCCGTATCAAACA 2835 37 100.0 34 ..................................... AGGTTGCACTCAATCAACTCGTTGCGGGCGCTGA 2764 37 100.0 39 ..................................... ACACTCCACACCACGCGCCGTCCTTGCCGCCACTCGGTG 2688 37 100.0 36 ..................................... CCGAAGTGGCCTTCCTGGTCGATGCGATCAACGAGC 2615 37 100.0 35 ..................................... CTTTCCGGTGGGGCTCTGAGCGCGGCAGTACCCGC 2543 37 100.0 35 ..................................... GTCGCCTGACACCGAGGCGAGAATGGCGGTATATT 2471 37 100.0 37 ..................................... TCCTTATGCACTCGTGGCGATTGGGCGAACCACCGCC 2397 37 100.0 36 ..................................... ATCCTTTCAATCGTTTCTTTCGGTACACCGTGGATT 2324 37 100.0 35 ..................................... AGATCAACAATGGGCGACACCAGGCGATCCCGAAA 2252 37 100.0 35 ..................................... AGGCGAGCAATGGTGGCGGTGCCAAGATTGCACTT 2180 37 100.0 40 ..................................... GTGTTCGAAGTGGGGGCGTCGGAGATTGTCAGTGGCTATG 2103 37 100.0 36 ..................................... CCGTCGCACTCTCGCCCGGGTTCAGCGCCTCGACCG 2030 37 100.0 34 ..................................... TCTTCGAGCGACTTGCCGAAGAGTTGTTGGTTCT 1959 37 100.0 37 ..................................... CTCATCCTTGCCTCTATGCACAAGCGCCCGACGCAGC 1885 37 100.0 33 ..................................... ATCGTAAAAACGCCGGGGCTGCGCAACAGCCGC 1815 37 100.0 34 ..................................... ATTTCATTCCGTAAAGCTTCTATACGTTTCTCGT 1744 37 100.0 37 ..................................... AGTGCTCACGACGATCAATCAGCGTCCAGCGTGGAAC 1670 37 100.0 33 ..................................... TTGTCCCGCTGCCGCTCGGCTCCAGAGGCGGAT 1600 37 100.0 34 ..................................... AACTCGGCGGCCTGGTCGTCAAGGTGATCAGTCA 1529 37 100.0 36 ..................................... GCGGATGTCGCACGCGGCTTCGGCGATCTGTTGACG 1456 37 100.0 34 ..................................... GTTCGTACTGCCTGCTGGCGAGGGCCATAGCCTT 1385 37 100.0 36 ..................................... ATCGTAAAAACGCCGGGACTGCGCAACAGCCGCCGG 1312 37 100.0 40 ..................................... ACGTATGACGACGTGGCCGCCCGCTGGCAATGCAGCCCGG 1235 37 100.0 34 ..................................... CCTCTTCCACGAGGCGAGCACCGTGCCTTTTGCG 1164 37 100.0 35 ..................................... ACCCAGACTTCAGCCGCCCGCAGCAGGCCGATGGG 1092 37 100.0 34 ..................................... GCTTGCCGCTCGTTGTGATCCGATACGGATCAAC 1021 37 100.0 36 ..................................... AGCGCACGCGGCGCTGTGCCAGGTTGAGGAGCAACT 948 37 100.0 33 ..................................... CACACTTACGAAGGTGAAATGAAGTGGCTTGAC 878 37 100.0 36 ..................................... CCCTATTGCATAATTTCTGTCAGTATGCTATTGTCA 805 37 100.0 36 ..................................... GGGTACAGCGAGGGCTGGCGCGTGAACCGCTTGCGG 732 37 100.0 37 ..................................... ATCTCGCCATCAGCGCTCGATCCGTAGATGCGCTGGC 658 37 100.0 35 ..................................... CATCCTGGCACTCCCGGCACTGCGTTGATCCGTCA 586 37 100.0 35 ..................................... AACATGGCATCGTCGCGCCCGTCGGTGGTTGCCGT 514 37 100.0 35 ..................................... ATTGAGAATTGAGCGATCTGGCGCTCGGTGTTGGC 442 37 100.0 34 ..................................... CCGAAGTGGCGTTCCTGGTCGATGCGATCAACGA 371 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 79 37 99.8 35 GTCGCGCCCGGCCATCGTGCCGGGCGAGCATTGAAAC # Left flank : GAGCTTCTGATAACATACGATGTCAACACAGAGACAGCAGCAGGCCGGAGGAGACTTCGACGTGTGGCAAAAGTTTGTGAGCGGTTTGGTCAACGAGTGCAACTCTCTGTCTTCGAGTGTGTCATTGATCAGGTGAATTTGGCTCTACTCATTGACGCACTTGAACAAGAGATTGACGTAGAACAAGACAATCTCCGCCTCTACCGGCTGCAAGAGCCACGGAAAAAATATGTCACTGTTCTGGGCAAACCACTTGAACATGACCAGCGCGAGCCGCTTATTTTTTAACTTCAGAAGCCTACTAGATATAGGGGGTGACAACGCGAACCCAGAATGCTCACAAAATCCTGGGAGGTTCGCGCATCAACATGACAATAACACAGCTTCAAGACAGCTACCAGAGGTATCTGAGCGTTGTATGAAGGTTCTGCAAAGCAATAATCAACCTTCGTCTTGCACCTTAACAACCCAAAACGAAGGTAAAACGGCTATTTAGTGGC # Right flank : CGCTGACTTGGCCGAGGGTTGGGCTGAACATAACGCAGCGACGCCGCTTCCGCGATGGCGGCACTGAACATAACGACGGCTTTTTGACGCATGTGTGCGCATATACGCCTGGTACGCGAGGATGGAGCCACGCAGCGGGGTGGGCGGTTGGGTGATGCGGCGGGGTGGGCCTGGACACTAGCGGAAAGCAGGCGATCATGTGCGACACATGGCGTCATATCCCGGCCCGGCGCAGCACCATCGTGTTCCGCACCATCGCAGGGCTGATGCAAAGTCAGGCCCGGAACAAGAGGCGGTCGATGGCGGCTGCCAACGACCGCTGCAACGCGGCCAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCGGCCATCGTGCCGGGCGAGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.20,-15.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : NA // Array 1 1814-2149 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYXE01000070.1 Candidatus Chloroploca asiatica strain B7-9 NODE_221_length_8687_cov_78.0799_ID_198911, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1814 37 100.0 40 ..................................... CAGCCCAACGCGGTCCAGATAGCGAAGCCGATGGCAGCAC 1891 37 100.0 33 ..................................... GGGCAGTGCCCAGGCTAGCAGCGCGTCCAGGGC 1961 37 97.3 39 ..............................G...... CGGCGTCACCGTCACCACAGGGGTGTTGGTGGGCAGCGG 2037 37 100.0 37 ..................................... GACGATGGGGGATGCCACGGGCGTCCCGGTGGGAGCC 2111 37 91.9 0 .............................T...G..G | TT [2143] ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 97.8 38 GTGACGACCAACGCCCCGCAAAGCAGGGGGTCGAGAC # Left flank : GAACAGCCCTCGGCCCAGGCGCGGACGATCTCGGCGCGGACGAACTGCTCCAGCGTGAAGGTCGGCGGCGCCCCAGGCGTACCCTCGGGATGACGATACGCGGCACAGGCCGCGACCACGGCCGCGGGATCATAGGCCAGGCCGATGCGCACCAGCGGATGGTCGCGCACCGTCGTCGTGAAGATCCGACGGAGGATGGTCGTCTCCGCCCAGATCAGGATCGGGCCAAGGAACGTGATGATCCAAGCTTGGAGCCAGCGCGGCACCGCGGGCAGATCGGGCGTGCCAGCCCGGAGGATTGGTGGTAGAATAGGGAGCATAACCGTCTTTTTTGTGTCCTTGATGCGGTTTTACTACAGTCATCATGCCACAAAAAAGCGGTTTTTCAAGCACGCAGATCGGCGATCCTTCGCACCCCGAACAGTTGCAGGTATTCTGCACCAGTCTCAAGCAGGGGGTCGAGACTGGAACGCTTCCAAACCTGCGCGCCAAATATAGCT # Right flank : GATCTGCCGAGCGTATGCTGTGGGGATGTGGGGTAACGGGGCGTTGTCCGGCGCTCAACTGTCAGTCTGGGGGGATTATCCTTTTCACGGTGGGGCATGGGGTGGCAAGGAGCGATGCGGCGGGTTTCGCGCAGGGGGCCGTCCTTTTTAGGACAGGGGCCTCTCTTTGAACAGACAGGGTTCTATGCCGACAGGTCTGTGGGCGTAGCAGCAATGCGGTGGGGCGTTTGTCCAATGGATGGGCCAAGGGCTGCTGCGCCCCTACTTCCCGCCCAGCCCCGTAATGGCCGAGCGGCTTGCTTCGATGCCAAAGCCCCAGGCGAGGAGGGTGGCGTAGTCGGTCCAGAGGTTGGCCCCAAAGGTGGCGTTGTTGCCGTAGAGTTGCCCGAGTCCTACCAGCGCAAGGAGCACGAGCAGAAAGCCTGAGCTGAGCCAGAGTTCCCCTACGCGGCGTCCGCTTGCGTGCTGGGCCTGGGCTTCTGAGGTGGCGACCGGGGCAA # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACGACCAACGCCCCGCAAAGCAGGGGGTCGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //