Array 1 1014388-1019813 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP075682.1 Chryseobacterium sp. ZHDP1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================================================================================================================================================================== ================== 1014388 47 87.2 30 T..C...G.G.A.....................C............. GTCAACCCATGTGAAGCGCATCATTACTTT C,C [1014390,1014394] 1014467 47 100.0 30 ............................................... CCATGAATTATCATATTATACTCCGAATCA 1014544 47 100.0 30 ............................................... TTAAAAATAAAATAAAAAATGGCTTGGGCT 1014621 47 100.0 30 ............................................... ACAAAGAGATAATTAAGATGATAACAGAAA 1014698 47 100.0 30 ............................................... CCTTTCCTCAGCCTTTGCGCATCCATTCAT 1014775 47 100.0 30 ............................................... ATCGTAGGTCTGGGGAATGTTACCAATTAC 1014852 47 100.0 30 ............................................... GTCCATGCGCAATCCTTGCCATCTAATTGC 1014929 47 100.0 30 ............................................... TTTATAGTTTTATTTGAACATGAAAATCAT 1015006 47 100.0 30 ............................................... AATAAACCAATGAATAAAGACGAATTAATA 1015083 47 100.0 30 ............................................... ACAGAAACAGATAAATACGGCAACTACGGA 1015160 47 100.0 30 ............................................... GAAATTAAAGTTATTGTGATTGATGCGATT 1015237 47 100.0 29 ............................................... TCCAATAGATGATTAATTTCTGATTTGTT 1015313 47 100.0 30 ............................................... AATTTGTGGCAATTAAAAATCATCTTTATG 1015390 47 100.0 30 ............................................... AATTGTTATAAATCTGCTTCATTATCTCAA 1015467 47 100.0 30 ............................................... GAGCTTTTCTAAGTAATGCTGTAAGCTAAT 1015544 47 100.0 30 ............................................... GCACATATGATTTAATTTTCAATCTTTTAC 1015621 47 100.0 30 ............................................... TTTGCGAATCTAAGTCTCTTATAATATCTT 1015698 47 100.0 30 ............................................... AAACAAACTTTTAAATTAAGAATTATGCCA 1015775 47 100.0 30 ............................................... TTACACGGAAACGGGAGACGAATTTAGAGA 1015852 47 100.0 29 ............................................... GGTACTTTTGTAGGCATGGCGCGGATGAA 1015928 47 100.0 30 ............................................... ATAATATCAAGCGAATAAGATGAATTTTAC 1016005 47 100.0 30 ............................................... CGCTTTTGGAATGACTTTAAGTGAAACCTC 1016082 47 100.0 30 ............................................... ATTATGATCTAAGCTAATCATGGATAGAAA 1016159 47 100.0 30 ............................................... ATGCACGCTGTAATTTTCGTTAACGATTCG 1016236 47 100.0 30 ............................................... AAAGAAAAGCTTTATAAACTCCATTGTTAT 1016313 47 100.0 30 ............................................... AATTAAATCTAACTTTTCTTTATACTTCAT 1016390 47 100.0 30 ............................................... TCTACCTGATTTTTACTCCCGGTGATTGTT 1016467 47 100.0 30 ............................................... GCAATGCTCCTATCGCTGCGCTTATGGTTC 1016544 47 100.0 30 ............................................... TATATCTAATTCTCAAAATACTGTAGAGTA 1016621 47 100.0 30 ............................................... AAAACTACGAAAGTCTTATACCACCACGAG 1016698 47 100.0 30 ............................................... TAGGTTAGGTTAAGGAAATACGGGATCTTG 1016775 47 100.0 30 ............................................... TTTACCTTTTTTCATTTTTATTTGATTTTA 1016852 47 100.0 30 ............................................... CACGGAGGGCGATCTTTATGAGTTGGCAGC 1016929 47 100.0 30 ............................................... TTTGTGAAAATTTATTTGTCGCTCCTACTT 1017006 47 100.0 30 ............................................... TCCCGCGTTATTCGGGTGAATATTGTCTCC 1017083 47 100.0 30 ............................................... TTGTTATTCGGTTGGAATAGCTGGACCTTT 1017160 47 100.0 30 ............................................... AGAGGTCGAAGATCCTTATTTATTCTCAAT 1017237 47 100.0 30 ............................................... GGTAGAATACTTTTTTGATCCAAATTGCAT 1017314 47 100.0 30 ............................................... ATGCCTACTCTATTCGACTTTATTGACGCA 1017391 47 100.0 30 ............................................... ACTGGATAAAAACCCAAATCAAACGACAAC 1017468 47 100.0 30 ............................................... CAATTTTTCTAAGTAGTGTTGTAGACTTAT 1017545 47 100.0 30 ............................................... GGGGTATCAACCACACCTTCTTGTATTCCA 1017622 47 100.0 30 ............................................... GATATAATTGCATTATTTATCAGTTCGTTA 1017699 47 100.0 30 ............................................... AGCGCTTCGAATTGGCAAACCGAATACTAT 1017776 47 100.0 30 ............................................... AGAACAGAGAAGGCTTATTTTATCTGATAA 1017853 47 100.0 30 ............................................... TACCTACGAAAATAAACAATGGTCCGAATC 1017930 47 100.0 30 ............................................... AAAATTAAATCAAAATAGTATTTATTTATC 1018007 47 100.0 30 ............................................... ATCTTATGGATCCGACAAATTAAATAATCC 1018084 47 100.0 30 ............................................... GTCATTTCAGACAGCTATGGCAAAAACGCA 1018161 47 100.0 30 ............................................... AAATTTACCCAGAGCAGGTCCATTCAGAAG 1018238 47 100.0 30 ............................................... GCTTATGGTAAGATCATTAACAAGATTGCT 1018315 47 100.0 30 ............................................... TATCCAGATTTGATGAAGCCGATAGACTAC 1018392 47 100.0 30 ............................................... CAGTTTGAGGTACTTGTAAAAGCCTTGAAA 1018469 47 100.0 30 ............................................... TACAGAAATGCGAAATTAGCTACAGTGATT 1018546 47 100.0 30 ............................................... GCTTGTTACGCCGTTACCGAAATAAAAGTG 1018623 47 100.0 30 ............................................... ATTGTTGTTTCATTTTACGTAGTTTTCTAA 1018700 47 100.0 30 ............................................... ACCCCTCTTATTCATTTTACCAGCGCTAAT 1018777 47 100.0 30 ............................................... GTTCTGACATTTGCGTCCATGAATTCAGGA 1018854 47 100.0 30 ............................................... ATCAATTACTTCACCTCCTTTGAACTGCCG 1018931 47 100.0 30 ............................................... TTGTTGGAGCTTTTCTAGATAATGCTGCAA 1019008 47 100.0 30 ............................................... GAAGAGGACCAATTCAAACTACCGGCAGAA 1019085 47 100.0 30 ............................................... CCTACCGTTCTTGTACTTTTCAGTTGGATG 1019162 47 100.0 30 ............................................... ACCATTCCAAAGGCACCTATAAGGAATATA 1019239 47 100.0 30 ............................................... TTTATAATTATCGTGATATCGCACTCTGGT 1019316 47 100.0 30 ............................................... GCGACCGTTTTTGTACTTTTCACTTGCGTG 1019393 47 100.0 30 ............................................... AGGAACTTTAGTTGGCATAGCACGGATGAA 1019470 47 100.0 30 ............................................... ACTCACGCTAATTTCATTTTTCGAATTTCC 1019547 47 100.0 174 ............................................... CTCAAAAAATAATCCATTGGTTTTCAATGGATTATTTTATATTTTAAAAATAACAAAATCTCTAAAAGTTAATTATAATCTATCTCTAATTATCTTTTTTGATTTTCTATTTGGGAATTGCTTTGACTCAGCCAAATCGAATCCAACGCTTTTCGTCGAATCCGCCTACGCTTA 1019768 46 76.6 0 TCC.GCTGCG.A....-.............................. | ========== ====== ====== ====== =============================================== ============================================================================================================================================================================== ================== 69 47 99.5 32 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Left flank : CAGCTTGGCTTACTTAATCGAACGCTTTTCGTCGAATCCGCCTATGCTTTTCCTGCAGCGGATTTCAAAACTATTGTCTTTGGGCTAACAAGAATATATGTGAATTGCTTTGACTCAGCCCTAGCTTAATCAAATGCTTTTCGTCGAATCCGCCTACGCTTTTCCTGCAGCGGATTTCAAAAATTATTATCTTTGGGACAGCAAAGGTTTAATGTGAATTGCTTTGACTCAGCCATAGCTTAATCAAATGCTTTTCGTCGAATCCGCCCGCGCTCTTCCTGCAGCAGATTAAAAAATTATTATATATGGGCAGCAATAGTTGAATGTGAATTGCTTTGACTCAGCCCTAGCTTAATCAAATGCTTTTCGTCGAATCCGCCTACGCTTTTCCTGCAGCGGATTTCAAAAATTATTATCTTTGGGACAGCAAAAGTTGAATGTGAATTGCTTTGACTCAGCCCTAGCTTAATCAAACGCTTTTCGTCGAATCCGCCTACGCT # Right flank : CCTCAAAAAATAATCCATTGGTTTTCAATGGATTATTTTGTATTTTAAAAATAACAAAATCTCTAAAAGGTAATTATAATCTATCTCTAATTATCTTTTTTGATTTTCTATTTGAGAATTGCTTTGACTCAGCCAAATCGAATCCAACACTTTTCGTCGAATCCGCCTACGCTTATCCAGCTGCGGATTTCAAAATTATTATCTTCGCGATGAAGGGCAAGCTCAAAAAATAATCTACTGGTTTTCAGTAGATTATTTTTATTTTCAGGATTTAAAATTCAGAACAATTCGAGTTGTTGGAAGGTCGGTGGCGGTTCTTCTTTATTTCTGGCAAAAAAAATTTCGATGTCTCCAAACTGTTTATCGGTAATGCACATAATGGCTACTTTTCCGGCTTTAGGAAGCATAAATTTCACTCTTTTGATGTGTACTTCTGCATTTTCGCGGCTCGGACAGTGTCGTACATACATCGAAAACTGAAATAAGGTAAACCCGTCATC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.90,-2.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [8-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //