Array 1 124312-125483 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFYA010000004.1 Thermosulfurimonas sp. F29 map unlocalized plasmid p1 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 124312 30 100.0 37 .............................. CCGGCGGAACCGGCCAGGATGAACAGTTTCGAGGAGG 124379 30 100.0 36 .............................. TGGTCTTCCCGCACCGGGCGCAGCTCGCCCGGGGTC C [124393] 124446 30 100.0 36 .............................. GAGAGCTATGGGAGTGTACGGAATGCTCTCCGCGCT C [124460] 124513 30 100.0 34 .............................. AGGAGGGCGCGCATGGGGCGCACGGCCCGCAAAC C [124527] 124578 30 96.7 37 T............................. CGGACAAAACTTGCGGGCAAAAAGGGGGTGCGATCAG C [124592] 124646 30 96.7 39 ..........T................... GTTTGAAACGGGCGAGCCGGACACGCTCCCTCCGGGGCC 124715 30 100.0 38 .............................. GGGGCGCACCAAGTCACACCGGACACGCCGCCCGGGTA C [124729] 124784 30 100.0 38 .............................. AAGACGCCTCCTGCAAGCTCGTCAGTTACTACCCCTTG C [124798] 124853 30 96.7 37 .............................A GGGATTTTTTTTGATCGTCTGGGATTGGGGAGGAGAA 124920 30 96.7 37 .............................A GGGATTTTTTTTGATCGTCTGGGATTGGGGAGGAGAA 124987 30 100.0 38 .............................. TTGGATTTCTCCTGTCTGAGGATCCACAAAGTCTTTCG 125055 30 100.0 38 .............................. GTTCTGTAAGAAGACGGGGCATATCCCTTGTTGCCTGA 125123 30 100.0 42 .............................. CAACCGGGGGCCGGGTGGAAGTTTGGCATCACCTACCGCCTT 125195 30 96.7 35 ..........T................... CATGGCCCGCGGGTGGGCGCGGATCGTTTTTGCGG 125260 30 96.7 37 ..........T................... CCTCGACCTCGCCGGGCGAAAACCCGTGCCGGACTAG 125327 30 93.3 36 ..........T......G............ TGGCCTGAAGCTCCGCTTTTAGTTTTTCTATGGTCT 125393 30 96.7 31 ..........T................... GAACCTAGGGAGGATGGAGATCGAACCGCTA 125454 30 90.0 0 ..........T...........C......A | ========== ====== ====== ====== ============================== ========================================== ================== 18 30 97.8 37 GTTTGTAGTTCCCCTATAAGGGTTGAGAAG # Left flank : TCGATAGAGGGCAACGGAAAGGGTGTGGAAGAGTCTAAGGTTTGTTGTGGAACAGTAAGAAGAAATGCGAGTGTTTGTAACCTCTTGACATTCGTAGGGTAGCGTGGCGTCCCTGATCCTTTGATCGTCAAACATAAGCGCCGGATTGTGAGCCGCTGGACCCCGTATGGTTTTCATTTAATTCGGGGTTTAGCGGCTGACCACAGCGAAAGCGATCAACCGCCCCCCGATCCATGAGGACCGGTTCTGCCGGATGAGATGGCTCTGCCTGATAGGACAACCCCGGAATGCGTTGATAGCCCGAGGTTTTCAGGGGTTGGAGTAGAGTATGCGGGGAGGGTATAGAGAGGGTAGGGGTTGATCTTTGACAACGGGTGCCGCCGGATACCCCGGGGATCTTGCAGGATTCGGGGTCCGACGGCGAAACGGGTTGAGCGAAGGGAGTTATGTTGCTCGAGAAGAAAGAAATCTCAAGGGGTTGAAGAGTACCCCCTGCATGG # Right flank : ATCTATCCATCCTGACTTGTTCGGTTTGTAGTAGGAAAAGCGGCAAAAAGCACCCGTTCCGCATCGAACGACTGACGCCACAGGTAATCAGGAGCGAAGCTTTCCGTTAAGTTGCGCAAAACCGGACGGTGAGCCCGATGCGTGAACCTGCGCCGCACGCGCAGAACCTCGATGACGATGCGGACAATGCCCGCCAGAAAAATCGCCACTCCCGCTGGAGCCAGAGGTAGGCCGGTGAGGGCCTGGACCAGCACCATCAAACTGAAGATCACCGACAAGATAATGCCCGCTCCGAGAAGGATGATGGCGTCCTCGAAGGGGATGTCGAGAATGGGCAGGACCGTGGGATAATTTATCCTTCCGTGCGCTCGAAAGCCCCGGCGCACCTCAATCGCCTCGGCTTTGGTTGCACCGGGGCTCCGCGGCGCGCCGGACTGCGACATGGGGCTCCGTGGCACTTACTGAATGGTGCTCAGACTTTCAGGACCGCTTTCGAGAAA # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGTTCCCCTATAAGGGTTGAGAAG # Alternate repeat : GTTTGTAGTTTCCCTATAAGGGTTGAGAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 137684-138285 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFYA010000004.1 Thermosulfurimonas sp. F29 map unlocalized plasmid p1 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 137684 30 100.0 36 .............................. AATCTCTGTTAAATCCGGGGGCTGTTCCTGATTTTC 137750 30 100.0 36 .............................. ATCCCCCTCGGGATAACCGCGCCGGAACTCCTCAAT 137816 30 100.0 36 .............................. AGCAACCACCTCTCCCAGCTAAGCCACCACAAACGC 137882 30 100.0 44 .............................. TGGAAACAAACGAACACGACCCTCTTTCTCCGCACGGGGGAAAA 137956 30 100.0 35 .............................. CCGGGCGCGTAATCAGCGAGGGGCGCCGATCCTCA 138021 30 100.0 36 .............................. CTGTCCACCCCCAGCGCGGCCGAGACCTGGGCGGTC 138087 30 96.7 37 ..........T................... AAAGCTGGGGTTTTCCTCCTGACGAAAGGGGGAATAA 138154 30 96.7 14 ..........T................... TGAACCTCATCTCC Deletion [138198] 138198 30 90.0 28 .....GT...................A... AGAAGGGAAACAAGGAAGGGAAGGACGG Deletion [138256] 138256 30 83.3 0 .....GC.CC...................T | ========== ====== ====== ====== ============================== ============================================ ================== 10 30 96.7 34 GTTTGTAGTTCCCCTATAAGGGTTGAGAAG # Left flank : CGTGTTTAGGGGGGTGCAACCTTTTAGACTCCTCCGCGGGCTCGGCGGGGGAGTCTTCCTCGAGAAAGACGACCTCCTCGGAGCGGAGCATTTCCTCGATGTAGCGGTCGAATTCCTCCTCGATGTTCGGGGGATTCCCGCCCGATGTTTCTTTGGTTTCCTTCTCCTCAGGCATGACGGCCTCCTTAGCTTTTCGCCCTCAAGGGAGCAATTGCTTCTGTGATGAAAGGTAGCCGGCAGAGTTCGATGTTTTGCAATGCGGAGGAACGGATCGAGGCAACCCCGGAAGGGGTTGGTGCTCAAGGGTTTTCAGGGGTTGGCGTGGGTATTGTAGGGAGGGTATAGAAAGGGTAGGGGTTGATCTTTGACAACAGGTGCCGCCGGATACCCTAGGGATCTTGCAGGATTCGGGGTCCGGCGGCGAAACGGGTTGAGCGAAGGGAGTTATGTTGCTCGAGAAGAAAGAAATTTCAAGGGATTGAAGAGTACCCCCTGCATGG # Right flank : TGGAAGGCTAGTTTCCAGCTTGGGGAAGGATTGAGAATGGCTCGCGGGAAATCTATCCGCAAGGTGAGCTTTGTCCTCTATCTTCCAGAGGATGAGGAAGTCTGGCGTATGCTGGAGGCGCAGAGCAATCGCTCGGAATTCCTGCGGACGGTTTTGCATCTCTTCGCCGACTTCCTCAAGCGAGAGGCCGCGAAGGGTGAGGGGGTGCTATGGTACACGCCGAGCGACTCGGACGGCCGCATTCGTTTTATTCCTGTTCGAAACCCTTTTGTTGCGAGCGGGGGTGTTTCGTCTCCCGAGACGACAACGGATACATCGTTTTGCAGGGATGAAATAGGGGCGGATGCGGAGCGTGGAGAGGAGGAGCGGGAAACGGAGCGGGTTGAAAGCGATGAAATGCTGATGAGTTTGCGTAGGCTAATTTTTTGAGAGCGATGAGGGCGGTATTCCGCGCGCCGACGCGGTTTGACCGGTTTGAGCCCCGGGATTGGCGGACGCTT # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGTTCCCCTATAAGGGTTGAGAAG # Alternate repeat : GTTTGTAGTTTCCCTATAAGGGTTGAGAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 378611-379572 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFYA010000002.1 Thermosulfurimonas sp. F29 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 378611 37 100.0 41 ..................................... AAGCGTGTCGCTTATGCTTGGTGGCGCATAGTTGGATCTGG 378689 37 100.0 40 ..................................... CGTTCGTTACACATGTCAGGAATGCACTCCACTTTACCGT 378766 37 100.0 37 ..................................... CTTGTGGTTGATCTTTCATGGAGTCCTGCAGTAAGGG 378840 37 100.0 41 ..................................... GAAAGTTCGGAGATGGAAAGGTTTTGCGCCTCCACGCAATC 378918 37 100.0 36 ..................................... ATTTTTCTCAATATGTTATTCATTTGACAGGTCTCG 378991 37 100.0 39 ..................................... CGGAAGCTTTAACACGCTAGTTTTTACTGATTTTGCTGG 379067 37 100.0 40 ..................................... ACTCAGACAACTTCGTCAGGTTGGATTCGCGCTCTCTGCC 379144 37 100.0 41 ..................................... TTTCTTTTAAGGAGGTGTGTCATGGAAGTGTTCAGGGAGGA 379222 37 100.0 42 ..................................... TTGGTATAGAGAGGATTTTAGGTGATATTGAAGCCATGATAA 379301 37 100.0 46 ..................................... TTGGGCTAAAAGGGTTTCCAGGAAACTTTATTTGGCTCTACGGAGA 379384 37 100.0 39 ..................................... TCGGACCCTCCTCGGGTAATGATTACTCTAACCTATCCT 379460 37 100.0 39 ..................................... TCACTCCGAGTGGAAACGCCATCTTGATAATTTTTCTAA 379536 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 13 37 100.0 40 GTCGCAATCCCTTATTCGTGAGGGAAAGTTTTCTCAC # Left flank : TTCGATACCGAATATCTCTTCGACATTTTTGGCCGCAGGAAGTTCCGTCAGGGCGCGCTTGAGGTGGAATATCGGACCCTCGAGAGAGGTTTCCCCCAGTCTCCTTTTCTGACGGACGAGGTATTCCCGCTGGTTGTGAATTTTCCCGTGCACGAAGGCCCTGGCCAGCTGGATCCGCCTGGTCGGATCGTGAAATGTCCGAAACTGGTGCAGTCTCAACTCTATGTTTTTCCCGAAGGGAGTGGAGAGTTTTCCCAGGTACTTTCCGGAAAGGGTCAGGAAATGGACCTGTATTCCGCGTTTTAGAAGGGTCTGGAGGGCCGGAGCTGTGAAACTAACTCTTCCGAAGACCACCACCTGATCCACCTCGGCCAGCCTGACCTCTTCTTTCTTATGGCCGATTTCCAGTTTGAGCCTTTCCCCCTCCCGCGACACCTTTAATCCCTGTTCGGTGAGGTAAAGGATCATTTCAGCCCTCCCTGATGCTCCTTTTATTTGAG # Right flank : CAGTATGCTTCGTAACTCCTGTACTTTCCTGTATTTGTAAATCATACCTCGATAAGGGATAAAGAACCCTCCCCGAAAGCCCCATCGCACCCGGATTCTGCCCCAACTTATTAACAGTAACTCCTCAAGAAATCACGCAAAATCAAAATTGATGGGGTTCCTCCCCTCAATACCCCAAAAATCACAATTTAATACCGGGTTATAAAACCCTCACGAAAAAAGGGACCCTTATCGCCCGGTTTTCAAAGAACTATTTATTAATTAAAACACATCATCCCCGTCCGGGTAAGGGGTGCGACCCTTCCGGCGTCGGACTGCCACCCGATCGCCCTCGAGAAAAACGAAATAATCGCCAGCCCGCAGCCTCCCGGAATGCCGCCGTAAGTACTCCCTGAGCTCGTCCTCCAGATGGCAAAGCCTCTCCCGGGTGTGGAGATAAATCCCGGCCAGCTCCGCAGGAGAACTGTAAGCAAGGGTCAATCTATCCGTCCGCCCGGGAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCCTTATTCGTGAGGGAAAGTTTTCTCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 310536-307966 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFYA010000003.1 Thermosulfurimonas sp. F29 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 310535 30 100.0 37 .............................. ACGGGCCCCGTCGTCATCCCAGGAAGTCTTCGGATCA 310468 30 100.0 36 .............................. GCTTTAGATGGTCAGGGGCAAGATGGGCGTATATCA 310402 30 100.0 38 .............................. AGGCTCTTGAAGCCATGCAAAAGGCGGCTGACCAGCTC 310334 30 100.0 41 .............................. CCGGAAGATTCGTTCTTCTTCCCCTGGTACTCCACCGTCTT 310263 30 100.0 39 .............................. GTGGCAGGCCTACATCGCCCAGAATCCCATGGACGCCGA 310194 30 100.0 37 .............................. AACTCCAGGGCCGTGAGACACTGCTCAAGCAGCGTGG 310127 30 100.0 37 .............................. TCGAGTAAAATAATCAAGATGGCGCTTAACCTTACGA 310060 30 100.0 37 .............................. GCGAGAATGTGGGTCGTATTTCTTTGCCGAAGGACCC 309993 30 100.0 38 .............................. GATTATTAATCATCTGAGACCGAGAAACCCCCATGCGC 309925 30 100.0 36 .............................. AAATCCTGCGGTTTAAAAAATCCTCAAAACTCCTAA 309859 30 100.0 32 .............................. AAGCAGATATGCCAATGCCGGACGCCACGCTT 309797 30 100.0 36 .............................. GGATTTTGCGAATCGTACTGTTGATAATTTTACTGA 309731 30 100.0 38 .............................. GTTATCCTCGGCCTTCCCCATTTTTTCTGGGGGGCGAG 309663 30 100.0 37 .............................. GCGGAATTGGCGGTTTAATCGTATGCGGGTCCAGGTG 309596 30 100.0 37 .............................. AACTTTTACCCTGCCGACGCCCGGGAGTGGAAGCGTC 309529 30 100.0 37 .............................. TTCGATTGTTGCTTTATACTGCTTTCATGACGCTATT 309462 30 100.0 37 .............................. GTGTAATTGTAGGGGCTATTGCGTCTATTTGGGCGGT 309395 30 100.0 37 .............................. CACGAACAAACTCCTGAGCCTCCGGAGCACGAGACTT 309328 30 100.0 36 .............................. ATGGCCGTCTCTATTTTTACCTTTCGGATGGTACTT 309262 30 100.0 38 .............................. CCTTCTCAATGGTTTTTTGCTTTCCCACCGTGTCCACA 309194 30 100.0 36 .............................. GACGCTCCAAGGCACGCCCCCAGAGTGCTAACGCAT 309128 30 100.0 36 .............................. CGGGCTTGATGCCGCCGCCGTCAAGCTTGGAAAACC 309062 30 100.0 36 .............................. TTAGGCTCCCCCCCTCACTAAAATAAAGACAGAATA 308996 30 100.0 36 .............................. TTAATTCGACTTTGTCTTCTTCGAATATTCCTACTG 308930 30 100.0 37 .............................. TTCTCAAACGAAACTACCCTAATTATCTCAGGAACCC 308863 30 100.0 35 .............................. TAAGCTTCAAGAAGAACTTTAGCTAGGTCAGCATG 308798 30 100.0 37 .............................. CATCATAATGGCCATAATCGATATCAAGGATAAACCA 308731 30 100.0 37 .............................. TATGCACCAGATACAGTATAGTATTCCAAGTCTAGAT 308664 30 100.0 36 .............................. ATTTACGGGGACATTTGCTGCCTGGAGAGAGTTAAT 308598 30 100.0 36 .............................. CCAGGAAAATGCCTTTTAAGGCATTTTTAAAAAACC 308532 30 100.0 37 .............................. AGCGTAAGTGGACTTTGCGTATTCACGAGGGAAAGCT 308465 30 100.0 37 .............................. CGTAGTTTTCAACCTGGGCGTTTTGTTTATAATAAGC 308398 30 100.0 37 .............................. TATCGACGACAATGTTAGAATTAGACTTGAGCAATTC 308331 30 100.0 37 .............................. TATCGACGACAATGTTAGAATTAGACTTGAGCAATTC 308264 30 100.0 37 .............................. CACGAACAAACTCCTGAGCCTCCGGAGCACGAGACTT 308197 30 100.0 37 .............................. ATTTGATCGTCCCGTGCGGGCCCGTGGGGCCCGTGGC 308130 30 100.0 39 .............................. GGGAAAATGAAAAAGAAAAAGAAAAGGAAAATAAGAAGG 308061 30 100.0 36 .............................. TTTCCCATATTCGTCTTTGCATATCGAGGACATACT 307995 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 39 30 100.0 37 GTTTCGAGCCTACCTATGAGGAATGGAAAC # Left flank : AAGATCTGTCGCAAATACCTCAACTGGGTTCAGCTTTCGGTCTTTGAGGGAGAGTTGAGTCTGGCCCAGCTTGAGCGGTTGCTGGCAGAGCTCAGGGAGGTAATGAACTCCGAGGAGGACTCGGTGATCGTTTATACCTTTCGCACCCGGCGGTATTTTCTGCGTCGCCTCCTAGGCCGCAAGAAACAGGATCCGGAAAAACGGTTTCTATGAATTAATACCTACCAATCTTCGTCATTTTTGTATTTTTCTATTTCATACATGTATTCAGGTACCCCCTAAAGCTAATTTCTCGATAACAGGATGTTATTTTTAGTCATACTATTCAGCTCTAAAAATACTAGCCTTCTTGCCGCCGGACGAAAGGACTTTTTTGCTCTATTGGAGGTTTAGCGGCCTTTATTCCCGCTTGAATCCCTCGTTCTTTATTTTAGCCCCCCTTCAAACCCTTTATTTTCCAAATTCTTTATGGTAAATATGTACCGAGTAGTTTTAGAGGG # Right flank : TTGAGAGAAGTTCCTTATGATTAGACGAGGAGATGCCTGGAAGCTTGTACAGAAAGAAGCCCGTCCAGGGGACTTGGTGATTTTTGATCCAGATTACATTCGGGAACAGGGACGTAAGGTAGCAGGGTATGAGGTTACTGCCGAAGACAAGGAGTTAAAAACTTTTCTTGAAAAATTTAATCGCATCGTTCTTCCCAAGTCGCAGGAAGGAGTTAAATTCATAGTTACGAACACTTGGGATGAAGATTTGGCGAGGGCTTTAAAAGAACGGGGATTTGAGATTTACAAAGTAAATAGGAGGAGCCATGGCAAGAACATTAAAAGTGAACTGGTCGCCACAAACTTTCGAAGAGCTTCGCAGACAATGGATACTGCCGATGCTTCTTTTGGTGTCGTCCGAGGATCTCAAGAGGCTAGAGCGAGATTTTCCGAACGGGGAGGACCAGACAAAAGTGCTGTTGATTATGGCCGTTGAGCCGAAGGAGAAGTGGCGGGAACTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGAGCCTACCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //