Array 1 149926-147862 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZCF01000008.1 Paenibacillus sp. 1011MAR3C5 NODE_8_length_232956_cov_28.5989, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 149925 32 100.0 34 ................................ TCAAGACACATGTAGCGCATGGAATCGGTTGTGG 149859 32 100.0 33 ................................ CTTTCGCTTGTATGCGTCCTGTTCGTCTGCAGC 149794 32 100.0 33 ................................ TGTTACTGGCTCATATGTCTGCTCGAATATGTC 149729 32 100.0 34 ................................ TATTATAGCATTTTTGTACCTATAAATCCAGTAA 149663 32 100.0 34 ................................ CAATCTCTCCTTTAGTATGGAACTCAATAACAGG 149597 32 100.0 34 ................................ CTCCATCCACTAACCATCATAATATTAGGTCGCA 149531 32 100.0 34 ................................ CTTGTATGTCGAAAGAATGGATCGTTTTTACGCA 149465 32 100.0 33 ................................ AGTAAAAGAGTTTGGTGTAATTGGTGACGGGAT 149400 32 100.0 34 ................................ ACGAATAGGAACTCGACTGACTCCATTTTCTAAA 149334 32 100.0 34 ................................ TTTCACCCTCACCCAATTAAAGGGGCGATAAAAT 149268 32 100.0 34 ................................ ATTTCCTACGATCTTAAAACGGACTACACACGAG 149202 32 100.0 34 ................................ TGCATATGTCTTCTGTCTTATGAACTTAGCCGTT 149136 32 100.0 34 ................................ AGTCTGAGGGTGGAATTTCGGTAACGTCTAGTGG 149070 32 100.0 33 ................................ GATCTAGCCGGATACCTACAGCGCCCAATATGT 149005 32 100.0 32 ................................ ATGTGCATAAAGAGTGCTTGGTCCATTGATAT 148941 32 100.0 34 ................................ TTCGAAAAGTGGCGAGGCCGCCGCGTTCCGATGC 148875 32 100.0 32 ................................ TTCCAGTTGTTCCCCAATTTTTTACCGTACAA 148811 32 100.0 33 ................................ CTCTAGCAACAAGTCGACGTCCGACATGGACAA 148746 32 100.0 34 ................................ GTTTCGATTATGTCGGGACGGAGAGCCGTAAGGG 148680 32 100.0 33 ................................ CACATGGAACATCTAAAATTAAAAGGAGGTTTT 148615 32 100.0 33 ................................ TTGTCGGGGGCTATGAATGTGTGGTTAACAAAA 148550 32 100.0 33 ................................ ACTGTTGGCGTCGGCGTTACAGGTGTCGAAGTC 148485 32 100.0 34 ................................ ACCGTAGCAAATACGAGTGACGTATCGATCGTTG 148419 32 96.9 35 .....................A.......... AAAAACTGCCGGCAGCCGATTATGATGGCGAAGTG 148352 32 100.0 33 ................................ CTCCCTGAATTGATAGTTTTATGTGGTAAATGA 148287 32 100.0 33 ................................ AAATTCCATAACCTTGCTCATTTTTGGATTTAG 148222 32 100.0 34 ................................ ATGACCTGTTCGCTGTAATCGGTCTTCATATGGA 148156 32 96.9 33 ..............A................. AGCAAAGTCATATTGCGATCTTTGCCGGCATTG 148091 32 96.9 34 ..............A................. ACAGATGGGTGGCGGCATCGGGCTTGGCGTGACA 148025 32 96.9 34 ..............A................. TTTTTTTGCTCTGATTGGTCTAGCTGTCTGCGAT 147959 32 100.0 33 ................................ CTCGGAGATATTAAGAAGGGTTTGCGTGCCTGG 147894 32 87.5 0 .......G.................AA..T.. | C [147867] ========== ====== ====== ====== ================================ =================================== ================== 32 32 99.2 34 GTCGCACCTTACTTGGGTGCGTGGATTGAAAT # Left flank : TACTTATTACGTATGATGTGCGCACGGTGACAAGCGCAGGGCAAAAACGGCTGCGGCAAGTATCGAAGCTATGCCAGAATTATGGGCAGCGTGTTCAGAATTCGGTATTTGAATGCGTGGTGGATGCAACTCAATATACATCACTGAAGCTGCAACTGGCCGATTTGATTGACGAGGAAGAAGACAGCTTAAGATTTTACCGGCTTGGCAACCAGTATAAAACGAAAGTGGAGCACATTGGGGTCAAAGCGTCGCTGGATATGGAAGGGCCACTTATATTTTAGCTTTTACTTCAATGCCAAGAAAGCGGAGAAAAAAGTGCGAATCATCGGTGCGAATGTGAAGCTCACATAAAAACACTAGGGGATTCGCACCTTTTTTGCGAGGTAGAATTGCCGATTTGTCATGGCAAGTGATAGACAAGGAGAATTAAAAGTTGCTTTTTTGCAGTTTGAGAGCTAATCATCGCTTGATATTATGCTTTTTTGCTCAAAATCGCG # Right flank : TCGCATTTGTGCGCCCAGTTCTTAGACGAACAAAAACCGTGGATACAGGTGAAAGAGGATCGAGCATTATGCGGCCGCACCTTGCATATTTGTATGTAGATAATCGCCAACTTGGCTAATTTGCTAAATCCGTTTATTCCATTTGCTTGTGTGAAGGTGCGTCGCTTTTTGAATATGAGTAAACCGAGAGCCTCATTGCAACAAATACATGACGTGGAGATATTGATTGAGTGGATAGAGGTAAGTCGAATAGAGGAAGAAATGGAGCTGCTGAAGAAGCGCCTTCGTCGTTAACAAGCATGTTTGTTGTGCCGAGAACATCCTTGGATGATCCCGGCACTTATCGTCACGGCCTTTTATTTCTCCCCAATCGTCTCCCCAATCCACGCTTCATACGTCTTCACAACGGCGCTGAGATCTTCTTGGCCGAGACCGTTGTTGCATGTGATTTGGAACAGCTGCTGCACGGTCGCCTGAATAGGAGAAGGCACTTGCAGAGA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACTTGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 164066-159384 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZCF01000008.1 Paenibacillus sp. 1011MAR3C5 NODE_8_length_232956_cov_28.5989, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 164065 32 100.0 35 ................................ ATTTGCACTTTTTGTATACTGAGCGAACAAAAAAA 163998 32 100.0 34 ................................ ACAACTGAAACGCATGAACTGGTGTGGAAAGCGA 163932 32 100.0 32 ................................ CACTCATGCCGACATAATACTTGTCTCAACAT 163868 32 100.0 33 ................................ CTTTCCCTCCATCGCCTGCATGAAAAGCAGATT 163803 32 100.0 33 ................................ CCGATATTACCCAAGTTATCGTAGATCCACCTG 163738 32 100.0 35 ................................ ATAAAATGTCATTTCATTGTCAATCCATTGTAGAC 163671 32 100.0 33 ................................ GATACATCACAAAGTCGATGATATTTTGGGCTT 163606 32 100.0 33 ................................ CACCCTTGGCGGTTATACGCACAATAGGACTTA 163541 32 100.0 34 ................................ TTGTGTTGGTTCTGATGGGCATGGTCATGACCAA 163475 32 100.0 34 ................................ CGAATGCTGGGAACGTCATCATGAGGAACGGCAT 163409 32 100.0 34 ................................ CAATCCATGGCGTCATAAAAGAAATCGAGCTCTG 163343 32 100.0 31 ................................ GTCTACAGTCGGACGTTCCGATTTAGGTAAC 163280 32 100.0 33 ................................ TATGATCAATCGCTTCCGCTGGATCAAAAGCGA 163215 32 100.0 33 ................................ CGTAATATGTTGTGAAGGGAGACGTTTAGATGA 163150 32 100.0 33 ................................ CGTTTTAGGAAGCGCTAGATATCGGATCGCTAC 163085 32 100.0 34 ................................ CTTGTTAGTGTTGATAAACAATATATATCAGCAC 163019 32 100.0 34 ................................ ACTTGGTATGATAAAGGTGAGTTAGTTCAAGATG 162953 32 100.0 34 ................................ AACACAGAAACAGAAGAAATTGTCGCTCGTAGTT 162887 32 100.0 33 ................................ TGGCGCGAACTGTCTCACGTTCTGGCTAATCGG 162822 32 100.0 34 ................................ ATAACGGAGAAGTCATTCTATTAAAAGCAGAGCC 162756 32 100.0 33 ................................ TGCTACACGCCCGCCCCCCTACAAGGGCTAAGA 162691 32 100.0 33 ................................ ATTTTTTCCATTTGCTCATCGGTAAAAATCTGA 162626 32 100.0 33 ................................ TCAATCTTACATACAATGGCGTACTCAATAATC 162561 32 100.0 33 ................................ TACGTATCTCAATCGAAGCAATCGCGCATACTC 162496 32 100.0 33 ................................ GCTATCGCTATGATGCAGGCATGCTGTTCGCGG 162431 32 100.0 33 ................................ TAGTCAAACGTAATCGTCCAAGCTTCCGGAATC 162366 32 100.0 33 ................................ TGGCATTAGTATCGCCAGCAGCCATAACACCGT 162301 32 100.0 35 ................................ TCGGCCTCATTGCGATGCTAGTAGGGGGAAGTAAG 162234 32 100.0 34 ................................ AATGTCAGCCCTTGGCGTAGAGGTCCAGGGTCTA 162168 32 100.0 34 ................................ AGTCGAAGCCGTTGTAAACAATCGGACAATCCGG 162102 32 100.0 33 ................................ GGATAATGCCGCTGATGCTGTCTCGATACAGGC 162037 32 100.0 34 ................................ TCGCGCAGCTGGCTGAGAAGGAAGGCGCGAGCGT 161971 32 100.0 33 ................................ ACGGTAACATGGCCGGGGCAATCGTCTCAGCGC 161906 32 100.0 35 ................................ AGAATATCAAGATATTACATCAACAGCGTACGAGA 161839 32 100.0 34 ................................ GTACAGCGCAGGCGATCAATAAGTTAGCAAAGGG 161773 32 100.0 34 ................................ GTCTTAACATCATGGCTACGTTTCGCAAATGGCC 161707 32 100.0 33 ................................ AAGACCCTGTAAGTCTCTACATACGTTTCTGTA 161642 32 100.0 33 ................................ ATGATAAGGTGATACCTATAGATAATAGATCGC 161577 32 100.0 34 ................................ TCAATCGGGCTGAACTTACGGTGTTTATCGCGGA 161511 32 100.0 34 ................................ CGTATCCAGCAGCCGCATCATGCACTCTTTGTAA 161445 32 100.0 33 ................................ TCTTTCGCCCGGTCGACGTATGATCTAATAGAT 161380 32 100.0 33 ................................ TGCAGGAACAAGGTAGTATCCCGATCAAGGGGA 161315 32 100.0 33 ................................ TGCAGGAACAAGGTAGTATCCCGATCAAGGGGA 161250 32 100.0 34 ................................ ATCATCTCCACCTCGCGCGCCCATTCGTCAGCGT 161184 32 100.0 33 ................................ TCAGCATTGTTGGCAGCTGCTTGAAAGTAATCG 161119 32 100.0 34 ................................ CTCTTCCAACTGTTCAAAAACTCTGTCGCGATGG 161053 32 100.0 34 ................................ CCGAAAGGAGGATAACCATGGCAACAAGCACCGG 160987 32 96.9 33 .................A.............. ATATGGCTCCGGGAGAACGGTTATCTCATTAAA 160922 32 100.0 35 ................................ ATTTCCTGCGATCTTAAAACGGACTACACACGAGA 160855 32 100.0 33 ................................ CGTCTAGTGTTCCTGTAAAATCTCCAACAGGAG 160790 32 100.0 34 ................................ TTCAATATGTTTGGATATAAAACACATGAGGTAA 160724 32 100.0 35 ................................ CAATAATGCGCATACGTCTTTCGCTACAAACCAAG 160657 32 100.0 34 ................................ ACGAAAGTTAAATCAGGGAACTTGAAAGCGGTAG 160591 32 100.0 34 ................................ ACGAAAGTTAAATCAGGGAACTTGAAAGCGGTAG 160525 32 100.0 33 ................................ TTCGTATCGTCTGTGAGTTTGTTGTGACTCGTA 160460 32 100.0 32 ................................ TGTGCCAAATCCGTTGAATGTCCACCCTTTAC 160396 32 100.0 34 ................................ AGATCAGTAAGCTTTGCACTAATCTCACCAAGCT 160330 32 100.0 33 ................................ CGAAAGGGTAGCCAGGTAGTGAGTCTTGCGGTT 160265 32 100.0 33 ................................ TTTACAACAGGTTGGTAGAGTTCGATCACTTTC 160200 32 100.0 33 ................................ TCCGCCATATACGGTGGATTGGTTAGATGACAA 160135 32 100.0 34 ................................ GAAATGGGACAAGCTGAAGGACAATTTGGACAAA 160069 32 100.0 33 ................................ CCTGCAACCTTGACCCGACATTTGCACATGAAT 160004 32 100.0 33 ................................ TGCAAAGGAGCTTGTATCAAAATAGTAGTCGTA 159939 32 100.0 33 ................................ ATTTAGTCACGAATACGATTATGGATTCAGAAA 159874 32 100.0 33 ................................ TCGGTTGGACAACCAACAAGCTTGTATCTGCTA 159809 32 100.0 34 ................................ TTGGCGCGGTCCGTTTCGGCCTTTTCCGCTTCGG 159743 32 100.0 33 ................................ AAAATCGCTGTCAGTAAAGTCTGGCAACGCCTT 159678 32 100.0 35 ................................ TTTTTGAAGATCGACATCAACCAGCCGATCCCGAA 159611 32 100.0 35 ................................ GTGTCGGTGCCGAAGTTGCTGACGGTCATCAAAAG 159544 32 100.0 35 ................................ GTGTCGGTGCCGAAGTTGCTGACGGTCATCAAAAG 159477 32 100.0 30 ................................ ATCTCCATTGGCGGGCGGGGCCGGCTTGCA 159415 32 93.8 0 ..............G..............G.. | ========== ====== ====== ====== ================================ =================================== ================== 72 32 99.9 34 GTCGCACCTTACTTAGGTGCGTGGATTGAAAT # Left flank : TATGCATGACCTTGTCTTTGTCAGCGTGCTGCGCTCCCATTGCCTCTTCGTGAGTCATAATGGACATGAGCTGGCCGCCAAGTGAATCTATGTAGAATTGACCTTGCGTTCTAGCGTCCTCCGAAATGATATATGGTTTTAACTTTCCCATTGGCAAGCATCCTTTCTTAGTCTTTTGGATAAAGGCATATACTTACTATAAGCGATTAGGCATGATATCATTTCTTTTGGATTGCGGGGTTGTAGCTCTGATTGAAATTGTAATAAAAGGCAGGCTCGTTTATAATCTTTTTACTCTCCATTAATTGTAATGAAGTAGTGCAAATTGTTGGTGCGAATGTGAAGTGCACATGAAATCCCTGGGGGATTCGCACCATTAAATACGCTTTATAAGATGATTCAAGATAGATTGAGTAGCTATAAATGAAATATAGGATCATTTTAATGATTTTATATTTTATGAAAATGATTGAATGTTACTTTTTGGTCTGAAAATCGCT # Right flank : GTAACAGGGGCGCAACCCAGCACGGAGGCTTATATTCTAGAGCAGGGGTATAAATGCGTTTAGTTTATTCAGGGATTCATATGTTGGTAGTGGATTGTATTCAAACCAGAGGTGAAAAAGTAAGTGGAAGAGTCGCTTCGAAATACTCGAAACGGCTCTTTTTGCAAATTGAAGCTTGAATACAAAGTGAAAATAGTTCCAAAGAATTAGGAAAAAAGTTGCGACTAACCTGTGATTTCAGACGTTATTAAGTATAGTACTGTCGATTTAGCTTGAATGCTCCCATTTATGAAGTGTCAGCGGGATTCGATGGGCGCATGCAACATGAAAGGAGGGGGACCAATTACGTTTTGAAAGCAAAAGCCTTGAGAATGAATGGTTTTTGCTCGAACTCGCAGTCTCACCTTGTTTAGGTGCGATGCTTGCAGTCATAGACTGCAAGTAGGATTAATTCTATATCTTGCCGCATCTTCATCAAAGATGCGTGGAATAAATAAGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACTTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //