Array 1 1768888-1770308 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019030.1 Limosilactobacillus fermentum strain SNUV175 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================== ================== 1768888 29 96.6 32 ............................C GGCGTGCGTGTCGTGAGTTTGCTGACATTATG 1768949 29 100.0 32 ............................. CGAACGATGCTCGGCACAATCGAAGATTATCC 1769010 29 100.0 32 ............................. AGAGTGCGTGGATTGTGCAATCGAACGATGCT 1769071 29 96.6 72 ............................C ATGTTGGACATCCGGCAACCGGCACTTACACGGTGATCCTACCGGTTGGATCCGTGACCGCTATGGCACGGA 1769172 29 100.0 32 ............................. TTGGGATGCCGGTTATGGCATTACTGACTTAG 1769233 29 100.0 32 ............................. ACATTTGAGCGAAGGCCGTGTCAGCGTTGTCA 1769294 29 100.0 32 ............................. AATATGTAGTGCAGACGAGCAAGAGATTGCTT 1769355 29 100.0 32 ............................. AAAATTCGAGCCGAGTTCCGCAAGAAGTACCA 1769416 29 96.6 32 ............................C AGCGCCTGGAAGTTAGCTAATAGAATGATTGC 1769477 29 100.0 32 ............................. CACATCAATGTTAGCAATACTGATTTGGATAT 1769538 29 100.0 32 ............................. TTAGTAGTCTTCGTCGTCTCGAATGTCATCAT 1769599 29 100.0 32 ............................. GGCTAGCTACGAGGCTCAATTAACACGGGCCA 1769660 29 100.0 32 ............................. GACTGCTTCGAGTGATCGCATTCCAGTGGTGA 1769721 29 100.0 32 ............................. ACGGCCGGCGTTACTTGCCTAGCAAGGGCACC 1769782 29 100.0 32 ............................. TTGGCACAACTTATCAAAACTTGGCTGCGATC 1769843 29 100.0 42 ............................. AAACTGATTACGCATTACTTTACCTCCTTTGGATCAATTGCC 1769914 29 100.0 32 ............................. AATAACATGAATACGGATTATTACGCAAACGG 1769975 29 100.0 32 ............................. ACCGCTAAAGCTACAATCACATCTGCAAAATT 1770036 29 96.6 32 .....T....................... GGTACAATTGAAGGATCTGAATTAGATATTGG 1770097 29 96.6 32 ............................C GTTGTCCCAGTACCCGTGTTGGCGTCAGAAAT 1770158 29 100.0 32 ............................. AATACACCTAGCGGGAAGCGTTGTCAACAGTT 1770219 29 96.6 32 ............................C CCGGACTCGGCAAGCGTTGAATATGCACTAAA 1770280 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================================================== ================== 23 29 99.1 34 GTGCTCCCCATGTATATGGGGGTGATCCT # Left flank : GCGACTGACGAAATAATATCGATAGGGGCAGTTAAGTCAACCAAGGGGAGAGGGCTTGAACGATTTTATCGGATCGTCAGAACTAGCAAGCAAATTTCTCCTAAAATTGTTAAATTAACGGGACTTAACCAACGAAAGGTTAATCAAGAAGGAATTAGCTTAGAAGCTGCCCTTACGGATTTCAAAGATTTTATTGGGCACGCAATAGTGGTTGGTTATAATGTTGCATTTGACTGGGAATTTATCGAACGAGGGTATGATAAAATAGGACAAGATCGCTTAGGTAATCGAATTATTGATTTACTTAAAGTGGTTAGGCAAAAGGAAGTCTTTTTGGATAATTTTCGCTTTGAAACGGTTCTAAAATACTACCAAATTGAGAATCAGGATCAACATAATTCACTAGCGGACGCCGAGGCATCGATCAAGCTCATGACCAAACTGATTGAAAAAGGGTTTTTGAAGATTTGAAAATCGCTTGGTTACAGGGATCTTTTAAT # Right flank : TACATGGGCTTTAGTCGTACGAAGGAGTGATATGGTTGAGAGAATGTACGGCCACTACTACTCACCAACCACGGTTTCAAACATCACTAAGCGGACGGAACACCTGGTTGAAGAGTTCCACGAGCGCAAATTCAGGTACTCACAGTACGTCTGTGTGTTCCTCGATGCTACTTACATTCCGTTACGCCGTGGTACCGTTGAACGAGAAGCCGTTAACGTAGCGATCGGAATTCGAAGTGACGGCGGTAAGGAAGTTCTTGACTACAGTATCGCACCGACCGAGAACGGAGCCGCTTGGTCTGAACTACTCCAGGGATTACGCGCACGGGGGATTAAAGATATTCAGTTGTTCATCGCCGACGGTTTAGTTGGACTTCAATCTGCGATTGAGGCTAACTACCCGCAGGCAAAGTTTCAACGGTGCTGGGTCCACGCAGAGCGCAACCTTTTAGGGTACGTTCGCAAAAACGATCGCAGGGAGATTATCACCGACTTTAAGG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCATGTATATGGGGGTGATCCT # Alternate repeat : GTGCTCCCCATGTATATGGGGGTGATCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-3] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //