Array 1 19041-17479 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJJE010000014.1 Pseudoflavonifractor capillosus strain An827 An827_NODE_14_length_70079_cov_70.9148, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 19040 29 100.0 33 ............................. GCCCAGTATAGTCCGGCGGACATCCAGACCATC 18978 29 100.0 32 ............................. AGACTGAGCATACTGCGAGCGCATCTCGCCAG 18917 29 100.0 32 ............................. GGCCTCAAGCGTCCGGCGTTGCTGTCCATTGC 18856 29 100.0 32 ............................. AACGGTTTAACACTATCTGTCTGCTGGTCGGG 18795 29 100.0 33 ............................. GATGTCGTTGGATGATGTACTATGTTGAGATCG 18733 29 100.0 32 ............................. TCGTCCATGGTCACCCCGAACCGGGGCCACCA 18672 29 100.0 34 ............................. GAGTGCTCGTGGTGGTTCGCGCTACATTGAGACA 18609 29 93.1 32 ..............T........A..... TTGTTGCCGTCCCAATCGAAAAAGCGGCGTAC 18548 29 93.1 32 ...........AT................ GGGGTGATGGAGGATGGAGCAGCTGTACAAGC 18487 29 93.1 32 ......T.....T................ ACCACATTGTCCACCACAGTCTTAATCTGGCG 18426 29 86.2 32 ...........ATG......A........ TACGATCGAGAGAGCCACTCCCCCATGAGCGG 18365 29 89.7 33 .C......T....G............... ACCGCGATTTTTGAAGGTTGGTGCGATTTCCTT 18303 29 96.6 32 ........................A.... TAGTGGGGGGTGTCGTCTAGCTTGAATCCCTC 18242 29 93.1 32 ............T.T.............. CGACGGCGGGTTAACCTCACCAAGAAGCTCCT 18181 29 89.7 32 ...........A.........G......A GTGGTGGACTATATCACCACCGACGTCCGAGA 18120 29 86.2 32 ...........A.G....A.....A.... CGACGCTGGAGGATGCGCCAAGACCGCTTGTA 18059 29 89.7 33 .......A......G......G....... AACTTAACGCCGTAGATTCCCTTGCCGGAGGTG G [18037] 17996 29 89.7 32 .......TT...T................ GAGGCCAGCGACACCAACACCGACTTTGATGA 17935 29 93.1 32 ............TG............... GATCTGTCCCGGTTGGCGGACATTCTTGGCAA 17874 29 82.8 31 .C..........T.T....A.....G... CCAAGGGCTTGTTGTCGCAAATGCTGTCCTT 17814 29 89.7 33 .C......T..............A..... ATCAGGGGTTTGTGGCCCAGCGTCTGCCGGTAC 17752 29 93.1 32 ........................A.T.. GCAAAGGGCGGAAAGCCGGTGGACAAGAACAT 17691 29 86.2 32 ....................A..AA.T.. GTCGCCGCTGTCATTGTAGGCCGTCCGGGTCG 17630 29 89.7 32 ........T....G.......G....... CAGAACGCCGCCCGTGACTGCAACATGGAGGA 17569 29 82.8 32 ...........ATGT......G....... AAGTTCTGCGCTCGCATTGCTACCGGGGACTA 17508 29 79.3 0 ...........ATG...........G.AT | G [17484] ========== ====== ====== ====== ============================= ================================== ================== 26 29 92.2 32 GTAAACCCCACGCACGTGGGGATGGACCG # Left flank : GTTGCCGGGTATGCATTTTTCTGGGGAGCGAGACCTGACGCCCTGGCTGAATGCCATGCAGGAGGGGCAGATCTGGAGATTTGACCTACTGGCATCGCCCACAAAAAAGGTGGCGCAGAAGAACGGGAAAAACAGCCAGCGACGGATTCTCAGGACTTTGGAAGAACGCTGTACATGGCTAACCAGGAAAGGAGAGCAGAATGGGTTTCGGCTACTGAGTTGTCAGGAGTTGGAGGGCAGCCAGCTGACTGGCCGGCATGTTCCAGCGCGGGGCGGCCAGATGTATCTGGATCAATATCACTACCAGGGAACGCTCCAGATTACAGATGCAGTGCAATTTCAAAATGCAGTCCGGGAGGGGATTGGTCCCGGAAAATCGTATGGTCTAGGAATGCTGCTGCTGAGCCCTTGATTTTTACTAGAAATAAAATTTTGAATTTTTCGGCTGGTAAAAGTGCTGTTTTAATGCTTACACGTGAAATTTTTGATTTTATTTCAGT # Right flank : TTCTATCCGTGGTCTGGAAACTGAAGACTTTTCAATGCAGGGGGAATATTGTTGAAGAACTTACAGGAATTCCCTAAAGGGTGGATAAGCATTGTTATGCGGTCCGCCCCCGAAACGAAAAAATCGTTTGATTAAAAGTCTAGGAAAAGAAACATGATTTTCTTTTCCTAGGCAAATATTTATCTCTAATTTAAAAATTCCAACTCACCAATGTATTTCAACCAGCGGATCACTGCCGACGTTTCCCCACTAAAATATAGTCAATGAGGGCTTCCACCATTTCACGGGTCAGGTGCTCCAGATTGGCGTAACGCTGGACCAGTTCCCGGCGGTTGTCCCCGGCGGCAATTCGGGCGTCCAGTTCTTCCAGCCGACGGTTGGTTTCCGTGATTTTCCCCTCGATAAGCTCCTTTTCCTTGGAGAAGTCCTGGGAGAGACTGAGAAAATCCGCCTCGGACAGAATTCCCCGTACCTTATCCAGATAGAGCTCTCGCAGGCCC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCACGCACGTGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [34-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //