Array 1 78050-76108 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNDG01000008.1 Parabacteroides merdae strain BIOML-A8 scaffold8_size183167, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 78049 32 100.0 33 ................................ GTACGGTTTTATCATCCAATCTTGTAGGCTATA 77984 32 100.0 34 ................................ AGGGTGCGCGCGTCTATTGTCAAAGGTAAACGGA 77918 32 100.0 33 ................................ AGAAAAACAACAACAACTCCACTCAAAGTAGTG 77853 32 100.0 34 ................................ TTGTGACTATGTATGCTAAAGTCAATAATATTGA 77787 32 100.0 35 ................................ TGACGGTTCTATTTCTGTATTTTGCGACGAGGAAA 77720 32 100.0 33 ................................ ACTATTTGAGCAATGTGCCCAACAGTTATATCG 77655 32 100.0 34 ................................ AAGAAAAAACAAACTCCTGCGCCCGTTGGTGATA 77589 32 100.0 34 ................................ CAAGTTGACGAAAACGGTAAACGCATACCTTATT 77523 32 100.0 34 ................................ CCTAATATGGGTATCAATAAGGATGATCCTTTTA 77457 32 100.0 34 ................................ AGGCTTAATGCGAATAGAACTATTGGGTGGCACT 77391 32 100.0 33 ................................ TACGAGAATGGAATATGCCCTGACTATTGATGC 77326 32 100.0 34 ................................ AACATGCGTCTTAACAAAAGATTCTTTCCAAATA 77260 32 100.0 34 ................................ ATCAACCTGGTAATAAGACCACGCCTTTTGTATA 77194 32 100.0 33 ................................ AAGAACACAGTCTGACTTTTATAAGGTTCAGAT 77129 32 100.0 36 ................................ AGATAGGTACGGCTCAAATGATAATGAAGGAACATG 77061 32 100.0 33 ................................ GGTGTTATTTTGAACGATAACATACAAATGAAA 76996 32 100.0 33 ................................ AAATCCTGTTTCTTTATCTGACACACAGGCGAC 76931 32 100.0 35 ................................ TATTGGAGCCGGTAGACGCCAAAAGCGCGCCATTG 76864 32 100.0 33 ................................ CTGTTTGTCTCTTACTCCTTATTCCCAATTCAT 76799 32 100.0 35 ................................ ACGAATATAAATACGATCAAAGCCCAAGGCCTTTT 76732 32 100.0 34 ................................ ATGGAAAAGAGTAGGGAGGTCGAAAGCGTGATAT 76666 32 100.0 34 ................................ AGGAACGGGTAAACATACTTGAATATGCCGCTTT 76600 32 100.0 33 ................................ TTTGAATTTACCCCCTTTAGAGGATATGGAAGC 76535 32 100.0 36 ................................ TTATATTGTACATCTATTGCCATCAAATGAATCATT 76467 32 100.0 34 ................................ AAGGTCAAAACGCTTATTATTAAGTATAGCGGTA 76401 32 100.0 32 ................................ TGACGGTAATTTAAAGGACGGTCTTACCGTTT 76337 32 100.0 34 ................................ CGTTATATGTTTTATAACATATAGTCGGTTGTTG 76271 32 100.0 34 ................................ AATGGACGAGCCGTTGAAAGAGCTGTCATACTTG 76205 32 100.0 34 ................................ AGTTGACAACCGGTACGCGTGTCCTTCGGAGTCT 76139 32 84.4 0 .......................C....GCCA | ========== ====== ====== ====== ================================ ==================================== ================== 30 32 99.5 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTCATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : GAAGTTGATACACGTGTCATAGCCGTCGCACCCGTAAAGGATGCGACGGTAATGTTATTGTTGTAATTCAGACACATTTCAATCCAAACGCACTATTATAACCAACTCAATCTGTAACACCTATCACATCAACAGTAGTTCCTCTACCCAAGCACCGTCCAAAACCAATCCGGCCCGTTCATCATAACACCTTCCATCTTCCAATATAAAAATCCCAGCATACACTCCCACTGTTCCCTGTTTACATAACTGTTCGAAATCCCATTTTCTAATGGATACGCTATACTGCTGTAGCTTACGTAACAACCAAAATTCCGGGCCAATCCGCTTCAGTTCCTCCAGTAAGGTTGCACCATCACCATAGCCGACCAAGATGGATACCGAGTCTTTATCGTCTATCAACCGGAACTTCTCTGCAGCAGTTGCAAACATAAAGTGCATTTCTGCAAAACCTTTATATAACAGACCTTTTATATTAGCCTTATCAAAGGTGTTACAAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 85806-83730 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNDG01000008.1 Parabacteroides merdae strain BIOML-A8 scaffold8_size183167, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 85805 32 100.0 35 ................................ CGGCACCGGTGGCGGTGCTCTTTTAAATGCCGGTG 85738 32 100.0 34 ................................ AAAACTGCGGAACATAATAAAATTACGAAGCGAA 85672 32 100.0 35 ................................ GTAAGTAGTCAAACCAACAAGAGGCGCAACACCTT 85605 32 100.0 33 ................................ CTTGCTCCCTAAATGGTTGACATATCGTGAGCG 85540 32 100.0 33 ................................ TTGGATTCAGGGTAAAAACGATCTGTTTAAACG 85475 32 100.0 33 ................................ ATCTTAGTCTGAATCGGAAACATCATAGGCATA 85410 32 100.0 34 ................................ TTTAGCATAAATAGGTTGATACCCAATGTGGTCA 85344 32 100.0 34 ................................ TTATTTTCGTAGCCGAGAACAGTATTTAAAAACT 85278 32 100.0 33 ................................ GGGCTTAATACGTATAGAACTATTAGGCGGTAC 85213 32 100.0 33 ................................ GGATTTACCAGTATATGCAGGAACAAGAGGAAC 85148 32 100.0 34 ................................ AGGATTATAAGTGAGTGTAATAAAAAGAGGCGCA 85082 32 100.0 34 ................................ TTTTTTCGAAGTATCAGCCTTAATATTTTTTGTC 85016 32 100.0 35 ................................ TTAAGGCGCAGATTTCTGAAACTTGGTCTCGTACA 84949 32 100.0 34 ................................ CGGTGCTGGTGGCGCATCTCTTTTAAATGCTGGC 84883 32 100.0 32 ................................ CAAGTCCTGGCGGCATTGCGAAAAAACTCTTA 84819 32 100.0 34 ................................ AAAATCAACTTTATACGCATTGCCGTCCTCATCA 84753 32 100.0 34 ................................ TGGTTTGTCTGTTACACCCTCTGATATTGAGCGT 84687 32 100.0 33 ................................ ATTAATATCATTAATTTCGGATATCAACTTACT 84622 32 100.0 33 ................................ CGTATTAAATGGATGGGCTCTTTAAATATAGAA 84557 32 100.0 35 ................................ AATAATTTCCTTGTACGAAAAACCTCGGAATTGAT 84490 32 100.0 34 ................................ ATCCTTTCGAGCACGGATATAAGCAGAACCAATA 84424 32 100.0 35 ................................ GTACCAAGGACGCTGATAACCAAACACCGTATTTA 84357 32 100.0 35 ................................ ATCAACTTGGAAGTAAGACCATGCTTTTTGTATAA 84290 32 100.0 33 ................................ ATCCCTTCGAGCACGAATGTAGGCAGAACCAAT 84225 32 100.0 33 ................................ CATAGCGGTAGGAGTAGCCATAATGGGACCGGC 84160 32 100.0 34 ................................ CAAAGAGTACGCAAAGGAACTTTATAGAAAGACA 84094 32 100.0 34 ................................ AAATAGAATCTGATGGCTGACGGAATGAGCATAC 84028 32 100.0 35 ................................ GTCAATTTGAAAATAAGACCAGGCTTTTTGTATAA 83961 32 100.0 32 ................................ TTGCGAGAGCGCAGGAGTTTTTTCGCAATGCC 83897 32 100.0 33 ................................ TTACCAGAGTGCAGGAGTTTTTTCGCAATGCCA 83832 32 100.0 39 ................................ GTCCGTTTTAGAATACAACAGTAATAATGCAACTAATAA 83761 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 32 32 100.0 34 GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Left flank : TACTTCCAGGAGATCCCGTCTCCCCAGAGCCTGTGAAGTCATCCCACTCGTTCCCATCCGCAAGAAACCGAACAACCAGTAAATAATATTGAACAGCATCCCCCCTACCGCAATCGCCCCGATATAGGAAGCGGCCCCCAAATGTCCGACAATCGCCACATCGACCAATCCCAACAAAGGAACCGTTATATTGGATACAATAGAAGGAAGCGCTAACTGAAGTATCTTTTTATTCATTATTTATCGTATCTATAAAAACTATTCCTAACTTTGTCAGCAAAGTTACAGATTACTTTAGAAATAACATGATTACACTTATGTTTCAATAACAAAAACGCGAACCCTAAGTAATTGTAAAAAACGTTGGATGTTCGCATCCTCTATAAATCATACACTTATAGATTTATTTAGAGAATATGAACATTTATTGCTTTTCTACTTTATCATTCGCAAAATTACAATTTAAAAGTGTCATCAATAAAGCTTTTCACAAACATGGA # Right flank : CACTCTTCAAAGGCGCGTTTGAACGTGTCTTTAATGTCGCATCCTTTACGGGGACAACTATTTATAATATTTTTTGCAAGAAGATTACAGGATTAAAATATTTGTTTGTTAGAAAATAAAATATATCTTTGTTGAACAGAGTTATAAAGATACCTTATTACTCAAAGCATAAACACCTTATATTACGTTAACCTAAACATATGATATATACAAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGCTTTACCCGTCCGGAGATGAAAGTCGAAAGAGTTAGCTACGACATAATAACGCCATCTGCTGCCCGAGCTATTTTCGAATCTATATTTTGGAAACCAGCCATACAATGGAATATTACTCGAATAGAAGTATTAAATCCAATCAGATGGTTTTCCATGAAAAGAAATGAGATTGGAAGTTTAATGAGCCCCCGTTCATCCGGATTATTCATCGAAGATAATCGGCAACAAAAATCCAGTTTGTTACTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.50,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //