Array 1 250503-254964 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWJD01000004.1 Geoalkalibacter ferrihydriticus DSM 17813 scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 250503 32 100.0 35 ................................ GAAGAGTCCTGGCTGCGCGGGTATATCCGCCTGCC 250570 32 100.0 33 ................................ GATCAGCTCGAAATCCAGATGGCGCAAGAGCGC 250635 32 100.0 35 ................................ GACACCACCACCGTGGATGTCGACATCGTCAAAGG 250702 32 100.0 34 ................................ GTTGCGAAACCCTCCGCTTTCGCGCGCGGCGTCG 250768 32 100.0 35 ................................ GGCACCGACACCGCCAACAAGTACGTCGTGCTCAC 250835 32 100.0 34 ................................ AGTACATCTACGACACCGTCGACAACGTCGGGCG 250901 32 100.0 34 ................................ AATTACACGCGCCTGCTGGATGCCACCATCAAGG 250967 32 100.0 35 ................................ AAGGACAGCTCCATTATGCGCTCGTCATCGTCCAG 251034 32 100.0 34 ................................ TCTGACGTTGAGGAAATGGTGTTGGTTTATACAG 251100 32 100.0 35 ................................ TTTTTGGGCCGCAAGTCGTAGCCCCGTGAGTTGGC 251167 32 100.0 34 ................................ AAGTGAGCGATTGAGCTGTGAGAGTGCGACAACC 251233 32 100.0 35 ................................ ACCCCGAAGTGTGCGCGTGCATCGATGCAGTGACG 251300 32 100.0 35 ................................ TCCGGGTTGGTGTCGACCAGGAGCAGATCACCGTC 251367 32 100.0 35 ................................ ATGCAAGAAGAGGTCGACGCCTACAACCGCCGGCC 251434 32 100.0 33 ................................ TTCGATGATGCGCAACACCTCGCGTTCATCGTC 251499 32 100.0 34 ................................ CAGAAAAGCCGAGGCATCATCGGCGGGCTCGCAC 251565 32 100.0 33 ................................ AAAGATATAGGCGAGTTCCTGCTGCTCGCTCAT 251630 32 100.0 35 ................................ GGTGAGTACCGCGTGGAGTGCGTGACCTTTACCGC 251697 32 100.0 34 ................................ TTTGATGAGCGCCTCCAGGTGGCAAAAGACCTGA 251763 32 100.0 33 ................................ AGTGAAGAGTTGCAGACGATCGCCGAGCACATC 251828 32 100.0 33 ................................ ACACCGTCGGTGGACGTGTAACTGGATGAGGGG 251893 32 100.0 34 ................................ GATCTCAACCTGGGTGCGCTCTTTGCGGGTGCGG 251959 32 100.0 35 ................................ TTCGATGATGCGCAACACCTCGCGTTCATCGTCTG 252026 32 100.0 35 ................................ ACACTCGATGCAGATCTCTCGCCCAGGGCCTTGGC 252093 32 100.0 33 ................................ ATTTTCCAATAGTCAGCGGCTTCGATTTCGACC 252158 32 100.0 35 ................................ GCCAAAACCGGCGAGGGGCATTTGACCGATTACAG 252225 32 100.0 34 ................................ TCGGCGCTTGTCTCCTGGACCCGGATCGCGCCTA 252291 32 100.0 34 ................................ CTTCAACTGAATAAACCCCCGAAGCCTGGGCTCC 252357 32 100.0 34 ................................ ACCAGCTTGGTATAGTTGGGGGTGCCAAGCTGGA 252423 32 100.0 34 ................................ GGCGGAGGCACCGCCGACAGCCCCATCGTCACCC 252489 32 100.0 34 ................................ ATCGGTGCTGCCGGCGGTGTCGGGGTGCTGCATC 252555 32 100.0 33 ................................ GCCGCGCATGGTCAACGGCCTCACGCAAATCGG 252620 32 100.0 34 ................................ CCGCCCGATCTTGTCCCTCTCCCGCATGTCGGCT 252686 32 100.0 33 ................................ GCCTCTGAGTCGTCCTGCGGGTTGATCGTCCGC 252751 32 100.0 38 ................................ AATAGGTCGACCGCGTCTGCCAGCGCGCCAAAGAAGTC 252821 32 100.0 33 ................................ AATACATGCTAACGCAGCCGCCAATCTTTCCGC 252886 32 100.0 34 ................................ AAGCAGGTCGCCGAATGCGTTACGCAGGCCTTTT 252952 32 100.0 34 ................................ GCCTATTTCGGTAAAAACAACGCCGACGGCTTCA 253018 32 100.0 32 ................................ AACCTTCACCGCTTTAATATCTTCTCTTGTCA 253082 32 100.0 35 ................................ GCCGGAAAGAATCACGCCATGCTGAATCTGATATC 253149 32 100.0 34 ................................ AACACTCCCCGGCCACTTCGGCGCAGCCACCAAC 253215 32 100.0 34 ................................ ATAAAAAGAGAGTTCTCCCGCGCCCGCCTCGAAA 253281 32 100.0 34 ................................ CCCTGCGGCTACGCGACCCAAGACAAGAGCCTAG 253347 32 100.0 34 ................................ ATCACGTCCCGGATATGTTGCGGTCCCTTATCGC 253413 32 100.0 34 ................................ AGCGGTGGCAAAGACAGCGTCGTCATGGAGCGGC 253479 32 100.0 33 ................................ TTCCTCAACGGCAACCAGGCGCCCTACATGGAA 253544 32 100.0 35 ................................ ACATCTGCAACGAGGGTTGCCGCTGGGGTCATGAC 253611 32 100.0 34 ................................ ACTTGTGAAATGTCGGCAGGCTGTCCGGTCTGCA 253677 32 100.0 35 ................................ GTGATTACCCTCGGCAATGCGCCCGTACAGCTCCC 253744 32 100.0 35 ................................ AATTGAATCCGTTCGCGGATGGAGGGGGTAAAAGT 253811 32 100.0 33 ................................ CAATAGACTAGTGAGATCAATCATCGTTCCCAC 253876 32 100.0 34 ................................ TGTCATGGCCTGCATGCGCCATTGCGGGTTAATG 253942 32 100.0 33 ................................ TACACAACAAAATACAACGGTCAACAAAAAAGT 254007 32 100.0 34 ................................ TGCCTTCCGCGTCTCGCGTAACATATGTTGAAGT 254073 32 100.0 33 ................................ TCCGAACCGATGAAGGAGCTGCAGGCGCTCGTC 254138 32 100.0 35 ................................ ATTGAACGGTTGCCTCACACCAAGGGCAAGTGGGC 254205 32 100.0 34 ................................ TTTGCTGGCTGGCGTCACCGATCATCCGGCTAAA 254271 32 100.0 35 ................................ CAGGTCAAGGCCGGTAATTTTTTGCACAGAGCCTA 254338 32 100.0 34 ................................ CATGGTTGCAGCGCGTCGTTGCCGTCAAACTGTC 254404 32 100.0 33 ................................ GGTGGATTGATGCATCGCTTTTCCTTCGCGCAC 254469 32 100.0 33 ................................ CGTTAGAAAATTCGACACGAATTTTGGCCCCAG 254534 32 100.0 34 ................................ GCTCAGCATTGCGGAGGCAGTATTGAGGAAATTA 254600 32 100.0 33 ................................ TGAGTTAAAAGGCCTCTCTGTTTTGTACTTAAC 254665 32 100.0 36 ................................ CTTTTATCCCGCGCTGGTTTCGTGGTGTTGAAGGCG 254733 32 100.0 33 ................................ ATCATGTGGGCCAACCCTTGAGTGTCGCGACTG 254798 32 100.0 35 ................................ TCAGGAGCGGCTTGCAATGGGCGCAATCCGTGAAG 254865 32 100.0 36 ................................ TCATGCCATGCAATCGCAACGGCCAACCGTTCCACC 254933 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 68 32 100.0 34 GTCGCCCCCCGTGCGGGGGCGTGGATTGAAAC # Left flank : GCGGAGATCTGGACGAGTACCCTCCGTTTATCTGGCGGTGACGACATGATGGTGCTTGTCAGTTACGATGTGGCAACCTCTGATCGCGCCGGCGCCAAACGCTTGCGCAAGTTGGCAAAAATTTGCACCAATCACGGGCAACGCGTCCAGTACTCGGTCTTTGAATGCCTTGTAGATCCAGCACAATGGGTGGCGATGCGCCAGCAATTGATCAATGTCATCGACGAATCCCAGGATAGCTTGCGATTTTATTTTCTAGGGGCGGGATGGCGAAGGAAGATTGAACACATAGGCGCAAAGGAGGCTATCGACCAGGAAGGACCTTTAATCCTTTAGCGAACCCCAAGGGATGGTTGAAGCCCAGGGAGGTTCGCGCGGCCGATTTATAGGCGTTTTTTCGAGAATCTGGTGAGGATATAAGCATTTTGATTGTACGGGAGGATAAGGTTCGCGAATATCGGAAAAAAAATAGATAAAAATTAAAGACTTAGTGAACCACA # Right flank : CTTCAAAGATCCCCGGGGTCGGACCAAGCCAACACACTGAAATCAAACGGGATCTGCTTAAAAAACACCTCAAAAACAACCCTATAGGGCAATTTTCAGTGGTAAAATCGGGTTTATGTTCTGCAATTGGTATAAAATGGCAACGGGTTGGTTTGGTCCGACGCCGGATACGCGGATAACCTGTCAGCAAATCCGGCAGACTACATCAAGGATTTACGGCGACGTGACAAGGTGTTATCTAAAAAGGGTGGGGGCAAATTGCCTCCACCCTTTTTCAATCGAGCAGACGGAGAAGAAACGCTGTAAAGTTGTTGAACCGCATACTGGCGTGCCGCGTCTTCTTCCCGCCTCTGACGGGGTGTGTTTATCGCTGGTTGCGAGATAGAATATCTACTGAGGTAAAATTTGTACCCCATTTGCAGGAGCAGCGATCTGAGAATCCCATGCTATCGATCTTCGCGCAAATTAGTTATTTGGGAAAAATCTCTACTGAGGAGCCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGTGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //