Array 1 908973-912280 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLKP01000002.1 Christensenella timonensis strain Marseille-P2437T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 908973 33 100.0 33 ................................. GCCGTAGATGGGGCGGTACAGCTTGAGCGCGCC 909039 33 100.0 33 ................................. CCATCGACAGCGATCTTTCTATGACGCTCCTGC 909105 33 100.0 33 ................................. ATTATGAAAGCACAAACACGCGCAAATCAAAAG 909171 33 100.0 33 ................................. TTGGATAAGCGGAAGTTATTCTGGGGCGGCTCT 909237 33 100.0 37 ................................. ACTGCGGATACACGGCGGGGCTGGATGCAACGGGGCG 909307 33 100.0 34 ................................. ACACGGTATTTTGTGCAGTACAACAAACGGGAGA 909374 33 100.0 33 ................................. CCGTCTTTGTGTTTCGGATGGTCTGCTGCGCAG 909440 33 100.0 35 ................................. TGTGCTACACTGCTGCTCTTTTATTTCATTCAATG 909508 33 100.0 33 ................................. TCGTAATTTTCCACAGTACCATCATACTACTAA 909574 33 100.0 34 ................................. GATTATGTCGCCTTTTTCGTAATCTTCGTCGCAT 909641 33 100.0 33 ................................. ACGCCCCTGTCGCGGAATCCAGCCCTTGTAAGC 909707 33 100.0 33 ................................. ATCAGCCTGCTCCTGCAATTCTTTCAAGCGTCT 909773 33 100.0 34 ................................. AACAAAAAAGGTTCGGATAAACGGAAAGCCTGTC 909840 33 100.0 34 ................................. ACGATGCGGCTCTCGAGAGCTTGCAAGGACAATA 909907 33 100.0 33 ................................. AATATGCGAGCGGAAATATGCGTGTGGCAACTG 909973 33 100.0 35 ................................. ACGCTGCCGCCGGCATAATCAAGTCCCCTGCCCCA 910041 33 100.0 35 ................................. GCTGCACACATACCTTGAAGATGCGGGGACGGATC 910109 33 100.0 33 ................................. TTTTGCATTCACACAAGAAAGCCATATACAACG 910175 33 100.0 35 ................................. CTCATGATTTGCCTCCTATCACCCGCACCGCGATC 910243 33 100.0 33 ................................. ACCAATGTGCCGCGAAAGGCGGGGGCAAGGCTG 910309 33 100.0 35 ................................. TGCGCCGATGGCCTTAGCGCCATCTCTACAGGATA 910377 33 100.0 34 ................................. ATACTGCCTTTGCCTTCTCTTTCAATTGTTTAAT 910444 33 100.0 34 ................................. ATATTATAACATAACACTACACTAAAAAATGTTA 910511 33 100.0 33 ................................. ATCCATGCGCCACGAACTGCGCCCGTTAAATAG 910577 33 100.0 34 ................................. TCTGTCACTCCCTTTAGACAATCCGAAATCTTTT 910644 33 100.0 33 ................................. AATGCAGTCCAGCCGTTCGTCCACATTTATCAC 910710 33 100.0 34 ................................. GCAAAATAAGATACAAAACAGCTGGACGACAACA 910777 33 100.0 33 ................................. TCCCGTGATCGCCGCTTTGATAAAAGGAATATC 910843 33 100.0 34 ................................. ACTTCCCCCGGATTCCATGTCATCTGCAAGTTGG 910910 33 100.0 34 ................................. AGTTTTTGAATTGTAGTGATCATGCCTGCCCCAA 910977 33 100.0 34 ................................. GGTCTTAAATGACAAGATAACCAGTGGAAAGCTA 911044 33 100.0 34 ................................. ACGGAATCCGGCATGGATGTTGGGATGCTTGCAG 911111 33 100.0 34 ................................. ATATATGCTATCAGGAATATGGACCAGTAACCCA 911178 33 100.0 34 ................................. AATGCAGGGTGGAAAGCATACGCTGTTGAAAAGG 911245 33 100.0 37 ................................. TTCAAAGACGATTTGTTTGGGCAGCATATTTTTGCAG 911315 33 100.0 33 ................................. GCACGTTGCTTACTGCAAAGGTCAAATATGCAA 911381 33 100.0 34 ................................. ATACCCTCATAGACGCCGTTCGACAATATAAAAC 911448 33 100.0 34 ................................. AATATGGAAAAGGTCGAGCCTATGGCAACCAAAC 911515 33 100.0 34 ................................. AGTAAAGGCAAGGGAAAGGGACTGGTTTTGAACA 911582 33 100.0 35 ................................. CATTGCGCCGCCGAAGAACTGGTACCCGATTGTAG 911650 33 100.0 34 ................................. GACAAGTCGATCGTCAAGATAACCTGACCATAGC 911717 33 100.0 35 ................................. GCTTCCATTGCCGAGAAAGAAGAACGGTTGGATGG 911785 33 100.0 34 ................................. GCCTGCTCCATTGTAAAAATCTTTTTCTCAAGCC 911852 33 100.0 33 ................................. GTAATTTCTTCAGGATCAATTTTAGCGTCAGGC 911918 33 100.0 34 ................................. ACCGGCGGGGAATGGTACCTCTCAAAATACTCCG 911985 32 97.0 34 .................-............... CTCCCTCCTAATTATGTTTTGGGTATACCAGATG 912051 32 97.0 33 .................-............... ATCTGGAGATCGATAACATGCGCGAACTATACG 912116 33 100.0 35 ................................. GCCGTCCTCGATACGGAACGTATTTCCCGCAACAG 912184 32 90.9 33 A...........A.....-.............. TTGACAAACATGCCCTTGCCGCTGCCCGCCTTG 912249 32 90.9 0 ..............-............C..C.. | ========== ====== ====== ====== ================================= ===================================== ================== 50 33 99.5 34 GTCGCTCCCTTCGCGGGGAGCGTGGATTGAAAT # Left flank : AAGAGGGGACTTAGACGGCTATCCGCCATTTTTGTGGAAGTAAAGGAAACGACAAATGCTTGTTTTATTAACATATGATGTTTCGACAAATACTGCTGCCGGAAGACGGAGGCTTGCCCGCGTTGCTAAAAAGTGCTTGTCTTATGGACAGCGTGTCCAGAGGTCTGTTTTTGAGTGCGCCCTCGATTGGAGTCAATTCCTCAAATTGCAAAACGAGTTAAAGGGCATCATCAATACCGAGACGGACAGCCTGCGGTTTTATAATCTGGGTAATCATTATTCAGAAAAAATTATCCATATCGGCGCGAAACCCAGCATTGATTTGGAAGGAGATTTAATCATATAGGTTCGGTGCGAACCCAAAGCGACCATAAACTATTTAGAAGGTTCGCACCGTAAATATGCTTTTTCAAACTGCAAAATGGACATTATCAAGCAATTGGTAATTTGTCGAACACAAGATGGACTTATTGGATAATTTTCGTTAAGCATATCTTGCG # Right flank : TACCTGTACAAGCGCAGCGAGGTCGTCGAGCGTGCAAACAGAACTTGCATAGAAACAAATCAGGCTTTTCGCAGCCGTTCCCGCCACTGTTTGACCAGCTTGACCAGTTCGTCCTGCGGAAGCGGCCTGCTAAACAGGTATCCCTGGAATTCGTTGCAACCAAGTTCCAATAGTTTATCACGCTGCTCCGGCGCCTCGACATATTCCGCCAGTACGGAAAAGTGAAGCGATTTTCCCAGGCTGACAATGGAGGAAATGATATCGCATGAGCGTTCGTTTTGCAGCATATCCCGCACGATCGACCCGTCGAGCTTGACCTGGTCAAATTGGTTATTCTGCAAATAGAGCAAGGATGTATGCCCCATGCCAAAATCGTCAAGCGAGAGCTTATAACCCGCCTGGCGCAGAAGTTCGATGGTTTGTGCCAGCTCAGGCGTGTTGGAAAGCACCACTTGCTCGGTCACTTCGACCCACAGGTTACGCGGATTGATCTGGTTTTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGCGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-30] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //