Array 1 212939-213428 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIMS010000002.1 Corallococcus sp. NCSPR001 000000F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================================== ================== 212939 28 92.9 43 ..........................TC CGCTGCCCGGATGGAGCGGGAGCCCCCGGGCCGCGGGCGTCCC 213010 28 89.3 53 G....T................A..... CGCCGTGGACTCCGAAAGGAAGGGGCCGAGGGCCCGCGGGCCGCGGCGATTCA 213091 28 100.0 49 ............................ TCTCGTGCGCCTCCGGCAGGGAAGGGCCGGGAGCTGGACCGCGCGCTTC 213168 28 100.0 50 ............................ TCTCGTGCGCCTCCGGTAGGGAGGGGCCGGGAGCTGGACCGCGCGCTTCA 213246 28 100.0 48 ............................ CGCGGAGTGCCTCCGGTAGGGGGCGCGGGTCTGGGACGCGGTGCTTCA 213322 28 100.0 51 ............................ CGCGGAGTGCCTCGGGCTCAGAGGAGCCGGGGTCCGGGACGCGGCGCTTCA 213401 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ===================================================== ================== 7 28 97.5 49 AAACCGGTCCGACTGTCGGACAGGTTCG # Left flank : CTTGGCGAGAACCTCCGCCTCCGCCAGCAGCGGCTGGGCCAGGCCCTGGCCGTGGTAGCGCACCGAGGTGGCCAGGGCGCGCAGGTCCGCCGTGCGGGGCAGCCAGGCCTCGGTGCCGGGCGCGCCGGGCGGGTACAGGGCCACCGTGCCCGCGACCTCTCCGTCCACTTCCGCCACCATGATGGTGCACACCTTGCGCTTGGCGGCGACGTCGCGCAGGAAGGCCTTGCGCTCGTCGGAGTAGACGACCTCCGGCAGCTTCTTCGCGTACTGCGTGACGTAGGCGTCCACCAACAGTTCGCCAATCGCCTTGTCGTCCTCGGGCCGCGCCTCGCGGATGACGGCTCGCTTCACCACGTCCGTGCTCATGCGCCGCCCTCTAGCATGACGCCCCGGAGCCCGCGCGGCGCTTCCGGGCAGGCAGCCAGGGTTGTACCTCCTTCGTCCGACATGGGTCCGACCCGGCGACCAGGACCCGGAGTCCGGGACGCGGCGCTTCA # Right flank : GTCTTCTTTGCCTCCGGCGGGGGCCTCCGTCGTGGCGCGTTGCGGCAGGCGCGCTTCGCCTGCCCTCTCTGCGCCTACTTCCTGCGGGCGGGCACGGTCACGCGAGCGTGACGACGGCGCATGCCTCCGAGCGCCCAGGCCCCGAACAACAGGCCTCCCGCGACCGCCGCCGTTCCTCCTCCGCCCGTGGTGCAGCCTCCTGCCTGCGCGTCATCGAACGCGTCCGGCGTCACGTCGGAAGTGGAGCCGGGTGAACCCTTCGAGGGGCCTCCCGCGGCTTCGTCCGGCAGGGGCGCCGTGCCTCCGTCCGCCGGCGTGCCTGCGTCCGGGGGCTGCGTTCCCGCGTCCGGCGGCTGGGTCGCGGTCAGCTCCTCATAACGCTGGATGAGCTTCAGCCTTGCCGCGTCGAAGGCGGCTCCGTCGTCGGTCACTCGCGACGCGGCGGGGATCAGGTCGCGGGCCACCTTGCGCGCGAAGCCCGGGTCTCCCGCGTCACTCAC # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.22, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAACCGGTCCGACTGTCGGACAGGTTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 2 5244346-5244094 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIMS010000002.1 Corallococcus sp. NCSPR001 000000F_arrow, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================= ================== 5244345 24 100.0 33 ........................ ACGGACGCCGAGCGGTCCTCGGGGCCCACCGAA 5244288 24 100.0 33 ........................ GCGGAGACCGAGCCGGGAGCCGGGGACGCCAAA 5244231 24 100.0 33 ........................ GTGGCGACCGAGCCGGTCCTGAGCGACGCAGCG 5244174 24 100.0 32 ........................ TGGGAGACCGCCCTGGCGGCCGGGACCACCGA 5244118 24 91.7 0 A......................T | G [5244113] ========== ====== ====== ====== ======================== ================================= ================== 5 24 98.3 33 CCTGTCGGACAGTCGGACAGGTTC # Left flank : GGCAGGCGCTGGAGGGACTGCTCCCGCCGGACGCCCGGATCGAGGACGTCTCGCTGCTGTCCGCCGGAGACCGTGACTGGCTGCTGCGCACCGGGACCGGCGGCGCCATGGACTTCGAGCGCGAATCCACCCTGCACGCGCGTTTCGAACGGCAGGCCGCCGAGACGCCGGACGCGGACGCCGTGGTGTCCGACGGGACGACGCTGTCCTTCCGGGAGCTCAACACGCGGGCCAACCGGCTCGCGTGGCACCTGCGGTCGCTGGGCGTGGGCCCCGAGGTGACGGTGGCGCTCTGCCTGGACCGGTCGGTGGAGACCGTCGTCGCGATGCTGGCGGTGCTCAAGGCCGGCGGCGCCTACGTGCCCCTGGACCCGGCCGCGCCAGCAGCGCGCAAGTCGTTCGTCCTCAAGGATTGTGGCGCGAGCGTGCTGGTGACCACTCGGGCTCTGCAAGAGACGTGGCACCCAGAGGTGCCCCACCTGGTGCGGCTGGACGAAAAA # Right flank : TCGGAGAACCCGCCGCCGGTGGCGGGTCCGACGAACCTGGCCTACGTCATCTACACGTCGGGCTCCACGGGCACGCCCAAGGGCGTGATGGTGCGGCACCGCTCGGTGGCGCATCTGCGGCAGGCGATGAACGCGGCGTGCTTCACCCAAGCGTCCGGACCGCTGCGGGTCGCCCTCAACGCGCCGTACTCCTTCGACGTGTCGGTGGGACAGCTGGCGCTCATGCTGGAGGGCCACACGCTGTGCGTTGTTCCGGAGGCCGTGCGGCAGGATCCGGAGGCGATGCTCAAGTGGCTGGAGCAGCAGCGGGTGGACGTCCTGGACTGCACGCCGTCGCAGTTCAAGTTGCTGCTAGAGGCCGGCTTCCTGGAGCAGCGGCACGTGCCCGCGTACGTCCTCCTCGCAGGCGAGGCCGTGGACGAGGTGACGTGGCGCACGCTCGCGGAGACGCGGCGCACGCAGGCGTTCAACCTCTACGGCCCGACGGAGGCGACGGTGTA # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTGTCGGACAGTCGGACAGGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 3 7530477-7530726 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIMS010000002.1 Corallococcus sp. NCSPR001 000000F_arrow, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================ ================== 7530477 31 100.0 41 ............................... GCTCCAGCCAGGAGGGGCACCTCCTTGGGTCGGGCCGCGAA 7530549 31 100.0 44 ............................... ACTCAATCGGCAGGGACGGGCTCCCCCATCAGCCGAGCCACGGA 7530624 31 100.0 41 ............................... GCCACGGCCGGGAGGGACTCCCCCTTCAGCCGAGCGGCGGG 7530696 31 83.9 0 ...T....C...................GCC | ========== ====== ====== ====== =============================== ============================================ ================== 4 31 96.0 42 AACCTGTCGGACAGTCGGACAGGTTTGGCGA # Left flank : CCGGCACGCTGGCCGCGTCGCTGCGGGCATCGAGGGCCCTGTTGGACAGCGGCTTCGAGTTGGTGCTCGTAGGCAGCGCGCATGTGAAGAGGCCCGGGGAAGCCCCTGCTGCGTCCACGCCCGAAGAGGGCATGGCGATGCTGGCGGTGACCACGGCCGCGAAGGCTGAAGCGCGAGGCCTGAAGCCCCTGTGCCATCTGCGGATGTCCGAAGAAGCGGGCTCCGGCTTGGGGCCGGGCATCACGTTGCCGCCCCACTCCGCCCGGGAAGCACAAGAGCTGTTGAGCGCGATGCGGGCCGCCGCTGAAGGGCAGGCCATCACGCTGCGCTTTCATCCGGATGCCGCGACCGGCCTCCGGCTGGTGCTCCAGCTTCATCCAGGCCTCAGCTCGCGGCCCAGCGCCCCGGAGACGTTCGCCACATCCTCGGACAAGGCATGGGTCTCCAGTGCTGAGAATCGAGACCACGAAGGGGCCGCCCCGGCGGCGGCGAACCGCACG # Right flank : CGCTCCGGTCCGGCGGCGGGCAGCTTGGATGTCCGTGGGCCTGGTGCTCCGTTTGCATCAGGCGCAATGGCTGCGCTCCCCTCGCGTTCCGACCCCGAGTCTTCCGCCAGGGCTACCCGGGCCGTGCAAACAGGGGCGAGTGCGGATCGCTTGGATGAGGGACGTTCGCCGTCGACCTCCGCTCCCATCCCGGAGGCCACTGACGGCTTCGACCACTCGGCGCCCATCCGCTACCACGCGCCAGTGCTCGTCGAGCGCCCGGCCCTGATGACCGGAGCGTCACAACTTCGCGGCCGGCGGGTGCTGTTCATCGCGCAAGACGAGGCCGTGGCCCGTGAGCTTTCGGTCCTGGCACACGACGTCTGCGGCCCTGAGTTCCGCATCCTTCATTCCGGGGCATCCGATGCGGGCGCGCGGATCCACGGCGTCGACCTGACACGGGAGGAAACCGCGGAGGCGGGCCTGGATGCGCCAGGCTTCGCGCCTCAGGTCATCGTCGC # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACCTGTCGGACAGTCGGACAGGTTTGGCGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //