Array 1 5346-2751 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZMN01000060.1 Corynebacterium sp. EPI-003-04-2554_SCH2473622 contig_63, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 5345 29 100.0 32 ............................. CCCTGCGGTGTGGTGTTTGTCACTCCATGCCT 5284 29 100.0 32 ............................. TTCTACCAGCGCAAACGTATCGTTTTTGCAGG 5223 29 100.0 32 ............................. CCTAGATGTGCTTATTACCGGCGACGAGTCCG 5162 29 100.0 32 ............................. TCCCACCACGAATACGCCTGGGTATTCTTCCA 5101 29 100.0 32 ............................. CAGCCGTCGTGGCTTGGTGGGTTCGCGCGGGG 5040 29 100.0 32 ............................. CCCGGCGGCGGTGCCTAGTGAAGATAAGGAAA 4979 29 100.0 32 ............................. CGAGTACAAGCGCAAAGTGGTGCCAACGTTCA 4918 29 100.0 32 ............................. CTGGGCGGCTTTCGGTTGGTCAATATCCAGGC 4857 29 100.0 32 ............................. TAGTATTCAATCCTGGCAAACGCATGTAGCCG 4796 29 100.0 32 ............................. TTGTTGTAGTGCGTAATCGCGCACCTCAAAAA 4735 29 100.0 32 ............................. CTTGAAGCCCCTTGCCGGGGTGTAAGCCCGTC 4674 29 100.0 32 ............................. ATATGCCCTACGATCCCCCGGCTGCACAGCCA 4613 29 100.0 32 ............................. CTGCTAAAACAGCAGTTCGCCAGTTTTCATGT 4552 29 100.0 32 ............................. GAAACCGACGAAATCACGATCGTCGTCGAGAC 4491 29 100.0 32 ............................. TAGGTGCAGTGCGTGGCTGTGCAGCCGGGGGA 4430 29 100.0 32 ............................. TCTGAATGTCCTGCTGCAGATCATGGTCACCT 4369 29 100.0 32 ............................. GGCTGCTCATCACCGGGTAGCCACAGGTCAAA 4308 29 100.0 32 ............................. GTGCAAGCGGGCGATAGTTTGCGCGTGATTAA 4247 29 100.0 32 ............................. ATATGGTGTGGATTTTGTCGCCACCCGCGTGG 4186 29 100.0 32 ............................. CACCCTAAGCACACCCTAGCCACACCCACACC 4125 29 100.0 32 ............................. CCGCGCTACCCCGCGCACGGGGTGTGCCTACA 4064 29 100.0 32 ............................. CGGCATGATCAGCGTTAGCAGCTGTTCGTCTT 4003 29 100.0 33 ............................. CGAAGTACATCCCAGCCTTTAGCCTGACTCGGG 3941 29 100.0 32 ............................. AGCCCGCTGTATGCCGTTTTAAGGGGTTGAGG 3880 29 100.0 32 ............................. AGCCCGCTGTATGCCGTTTTAAGGGGTTGAGG 3819 29 100.0 32 ............................. GAGCGAGACATTCCGCATAGGTCCAATTTGGC 3758 29 100.0 32 ............................. CAGTTAGCGTGGGCACCTGACTACGGATTCTG 3697 29 100.0 32 ............................. ATTCGCGGGAATATCCCCAGTATCGGCTTTAC 3636 29 100.0 32 ............................. GTGGCTGCTTTAACCCCCGCCCAGCGTGAGCG 3575 29 100.0 32 ............................. CGCTTAAAACGGCTTACAGCGTGTCAACCGAT 3514 29 100.0 32 ............................. CGGTTACACAGTGGCACCGCGTGCCATGCAGG 3453 29 100.0 32 ............................. ACCGCCGGTATATCCAACATTCCGATCGTGGC 3392 29 100.0 32 ............................. ACGTCATGCGGGAATTTAGCCGCCTGGAAACG 3331 29 100.0 32 ............................. AAGATCATTCTTTCACTCCAGTTAAGGAGAGA 3270 29 100.0 32 ............................. TGCATGAGCGTTTCCGGGGATTCCTCACCGGC 3209 29 100.0 32 ............................. AACGCTCTGATGTAACCGTTCCTGAACCGCGC 3148 29 100.0 32 ............................. TGCCTGGTGATCGCGGCCCCCAGGGTAATCCT 3087 29 100.0 34 ............................. CCCCCCGCCGGTTCTCATGTGAGACCAGGCGGGG 3024 29 100.0 32 ............................. TGGGAGCGACATCAACGCATTGATAAGCCAAA 2963 29 100.0 33 ............................. ATTCAAAGCCACATCTACCACTGTTTTCGCCAG 2901 29 100.0 32 ............................. CACCAAGCTAGCCCGCCGAGCGGCGGGAAACT 2840 29 100.0 32 ............................. GATGCTGTTTCGAACGTAACTGTGGGCGCTAG 2779 29 93.1 0 .........................GA.. | ========== ====== ====== ====== ============================= ================================== ================== 43 29 99.8 32 CTCTTCTCCGCGCATGCGGAGGTAATTCC # Left flank : GCCGGCGTGTCAGAGCGGAAATTCACCGAAATCAAGTTCTCAAAGAGATGTTGTCTACGCTCATGCATATTCTGGAGCCGCACTTGCCCGCTCGCGATGATGACAGGTTAGTAGCAGGGCGCGGCGACGAGGTTGTGGGACATACTCAATATGGAAAAGATTAATAAGTGTTTTTAGTATTGACTTCTACCTATCTTCCTGACCATTTGCGAGGATATTTGAGCAGATTCCTTATTGAGGTGGATTCCGGTGTTTATGTCGGCAATATCTCTCGCAGGGTACGCGACAATATTTGGAAGCGTTGTGCCGAAGCAATCGATCGCGGCAGCTTAACCATGATCAATAGTGATTCCAGTCGAGAGCAAGGATTCGCTGTGAACACTCTTGGTCCACAGCGCAAACATATAATAGACTTGGACGGCATGTTGTTACCCGCGACCTTATCGGCTGTAGCGTCACAAAACGACGCTGACCGCTAAAGTTTTCGCAGGTAACGCAGT # Right flank : TGCGCTTGCAACTTGCCGAATGCTTGCTTGAGGGCATCAGCATGCTCTTGGAGCTCCTCGGCGCTGCTGCCCCCGGAGTAGAGAGACATCAACGCCGGATTCCTGGGCAATCTGGGCGCGCTTTTCACGCAGCTGCAGCTCGCGGTTTTCTTCTTCCAGCTGGGCTAATTTCTCGGCCTGCTTTTGCGCATCGGTTTTATTCGCCTCTTGCGCCTGGCGGTAGTTCTCCGCATCAGTGCGATATGCATTGCGCTCGGTGCGGTACTTAGCGGCTTCTTTACGCAGCTTTGCGATCTCGGATTGTAAATCCTGCTCAGAGCTCTGGTTATCCTCCCTACGATCAGCCGCATCTGTATCCTTGGCTGCCTGTTGACTCTCGGAAGTACGTCCACGTTCTTCGAGGCCGTCCTCGGTCTGGGTATCCGAGTTATCTGCGGTGGCGGTTGCGGTATCCATAGGTGATTCCTCCTGGGAATTCTTGGGGTGGATATGACAAAACC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCATGCGGAGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //