Array 1 23422-22463 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML660056.1 Denitrobaculum tricleocarpae strain R148 Scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23421 36 100.0 30 .................................... CAATACTCTGTCTATATCTACCCATACGCC 23355 36 100.0 30 .................................... GGCTCGTCACCTGCGGATCAATCTGGACCT 23289 36 100.0 30 .................................... GAGCCGGTGGCGCTGCATGATTATCGGTAC 23223 36 100.0 30 .................................... TCAGGAGGCCAAGCTCCGCCATTTTTTCTT 23157 36 100.0 30 .................................... TGTAGGTCTCGAAGTGCAGCCACTCCACGC 23091 36 100.0 30 .................................... TACCGCGACGGCTTTAACCTGGTCAACCTG 23025 36 100.0 30 .................................... GAAACGGCTGGTTTGGGACAACTGGCAAAA 22959 36 100.0 30 .................................... TTGTCGAGGATCCATCCAATGAAGACGAGC 22893 36 97.2 30 ...............G.................... CCGTTCGCCAGCATGGTCTGCGCGACCGAG 22827 36 97.2 30 ...............G.................... AGTGGTTCATGTGCAATGCAGCCTCTATCG 22761 36 97.2 30 ...............G.................... TGGAGTCGTAGCGTTCGGCGGAATTGGCCA 22695 36 97.2 29 ...............G.................... TACCCGCTCAGGTTCGAGTAGCTGTCAAT 22630 36 94.4 30 ...............G..........T......... TGATAGTGACGGTTAGACCCGCTTCACGTT 22564 36 94.4 30 ...............G..........T......... ACCTGCGCGATGCCGACCTGTGCGATGCCG 22498 36 80.6 0 ...............A............A.GAAG.T | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 97.2 30 ATTGTAGCATTCAGATAATCACGGTCCAGCCGCAAC # Left flank : GAGGCCGCCGGTGGCGATCTCGACCTGCCTTTAACGCTGCGGCCTCTCGATCTGCCGGCACCGGACAGCGGCCCGGCCCCTTAACACAACGCATGGCAACGCACCTCAGCGGATATCAGCTTATGTGGATTTTGGTTATGTTCGACCTGCCGACCGACAGCCGGGAAAGCCGAAAGAAAGCCACAAAATTCCGCCAGTTCCTGCTCGACGAAGGCTTCGTCATGAGTCAGTATTCCAACTACTTACGCTTTTGCAAAGGAAAGGAGCAGAGTGAAGCCTACATCCGGCGGATCGAGCGGAATCTCCCTGAGCGCGGCAAGATCAACATCCTTATGTTTACCGACAAACAATACGAAAACATCATCAGTTTTTCCGGGAAAACCCGCAATCCCGCCGCAAGAAACCCGGGCCAGCTCGCCCTATTCTAACGCTACAGAAAGATTTTTTGTGAATAATGACCGCTTAAACGTCTTTTTTATCAGATATTTAAGCGGTCACCT # Right flank : CGAAATGCGAAGCACCAACCAAGCCGATGGTTGCGTTCGTCTTCCTGCCTAACCCGCCAATGCAAACCGATAGTCCGCCGGCAGCGCCACCTCACGCAGTTCCAGATCTTCCGACGCGCCCGTCATCCCAAAGGTCATCCCCTCCGGAATGACGAAACTACCCCCCCGCGCTCAGGTCCTGCGCCCCCTGCCCTTCGGCCTTCAGGGTCACCGTCCCCTCCAGCACGAAGTAAAACACGAACTCCGCCCCGTGCTTCACCGCCGGAATCCGTGTCGTCCCCTGCCGTAGCCGCCAAACCCGAACACTCGCCAGCCCCTCTGTCGCCGCCGCGATCCCGATGTCCCGGAACTCGATACCCTCCAAACGTCCCGCCTGCCAGTCCGCCTTCTCCGCCTGATGCCGCGCAAAGCGCTGGCCGTTAAAAACCCGCTCCGGATTCACTGCACCATTCGGCAAGGGCATGTCATGGTCGATGCAGGTCATGTGTTCGGCGGGGCAG # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTAGCATTCAGATAATCACGGTCCAGCCGCAAC # Alternate repeat : ATTGTAGCATTCAGAGAATCACGGTCCAGCCGCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //