Array 1 1018671-1017838 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHXEL010000004.1 Bifidobacterium pseudocatenulatum strain YIT12821 YIT12821_4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
   1018670	    33	 100.0	    34	.................................	GTTAATGCTGGTCGAGTCCATCTCCTGCCGAATG  	
   1018603	    33	 100.0	    33	.................................	CACATGACGTCAATCATGGTGCACCTGAGCTGA   	
   1018537	    33	 100.0	    32	.................................	AGCGTGATGACGCCGGCGACCATGTTGCCGTG    	
   1018472	    33	 100.0	    32	.................................	ATTTCATAAAACCATACGGCGGCTTCCGGCCT    	
   1018407	    33	 100.0	    34	.................................	AACGATTTGCGTAATACGCCACTGGAATCGTACA  	
   1018340	    33	 100.0	    33	.................................	AGAAACGGCAAACAGTTCACGTTCGGGGTGGAA   	
   1018274	    33	 100.0	    36	.................................	CTTTCTGCTCGTTTGAACGGCCGACGAGGTAATCAA	
   1018205	    33	 100.0	    34	.................................	TCGAACACATCGTAGCGTCCGCGTGACATGTAGG  	
   1018138	    33	 100.0	    35	.................................	GAAGACGGGCCGTATGCCTCCGACTCCCGCAACAT 	
   1018070	    33	 100.0	    34	.................................	ACGATAGCCATGGCGCTGCCCAGGATCATCGTCG  	
   1018003	    33	 100.0	    33	.................................	AGCTGGGAGCAGTGCGTTCGCGCCGTACAAGGG   	
   1017937	    33	 100.0	    34	.................................	GATACGATTAAGATGATTTTCGAGCGTCGTATCA  	
   1017870	    33	  93.9	     0	.............C.........A.........	|                                   	
==========	======	======	======	=================================	====================================	==================
        13	    33	  99.5	    34	GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT	                                    	       

# Left flank :   CAATACCGATGAGGACAGCCTGCGCTTTTATAAACTTGGCGCTCGATATGCGGATAGGATTGAGCATTATGGACGTGAACGGAGTTTGCCGGTTAATGATGTGATGATGATATAGCACAGGCAAAATGGCATGGTGCCATAACGATATGGTGTGGGGTATGCTGGGTTGAGCGTTTGAGTGTGCCGTCCGGTATTCAGAGTGTGTTTTCTAGCCAGCAGTATTGTGTTTTCGGCAAGGTGGCCGGTCTTGGAATGGTGTTTGTGCGAAGTGTAAGCGCTCATGATAAGGGACGTCTTTCGCACCTGAAAAACTATCGAAATCCGAATTGTGATTTTCGTGGGGCGTTTTGAAAACTAAATAATGGACATTAAAATGAGACAGAAAGCCAGTTGCTCGTTTTAGACATGTTGTTCGTCGTATCGGCGGTGTTGTTTGATATGCTTAAAGCTAGGCAGCTGGCTTGCGTCTCAAAAAGCGGACAAAAATGTCCAGCTGCACT
# Right flank :  CGGTGTCTGCAGCGTTCCGGCCACCGCGTGGATGTCGCTCTCTCTGTTTATGTCCAGTGTTCCCCGCACATGCGGGGATGATTCCGCATGTGCGGGACTGTTGGTAACGGAAAACCTGGGTTTTTGTCCGCTCGGGGCGACTTCAACGGTAATACGAGCAGGAACTGCGACTGGGTGTTTCGCATGGGGTCGCTTCTGAAAGCTATGTAAAAGAAATAGTGTATGTGAAAACGGTCGGGTGGGTGCGGATGCACGAGAAATTGGCTAACCTGTCGAATTTCTGTTTTACTTTGGTCGTTCATCTCGTGAGTGGTCGTCAAGCTAGACATATTGTGTCCCATGGGATGCAACATGTCATATGGAAATACATATGACTGGCGAATATCGCCAATGGTTCAGCCGGATAAAGGAGCGGAACGCAAAAGCCCGAATCAGCGCGAGACTCCGATTGCGCTTCTAGATGGGGCGGCCGGTGGGTGACCTGCATACGGTTGGTGACG

# Questionable array : NO	 Score: 9.23
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [9,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.30,-7.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,10.05   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//