Array 1 47933-48391 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMF01000022.1 Chitiniphilus eburneus strain HX-2-15 HX-2-15_scaffold22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 47933 29 93.1 32 ..TA......................... ACGGCGGTTGGATCGAATCCAGTTCGCCGGCC 47994 29 100.0 32 ............................. CCAGGACTATAAAATGCGTGGCTGGTACCTGG 48055 29 100.0 33 ............................. GACTGGATGGACTGGCAGGACGATGGCGCCGGG 48117 29 100.0 32 ............................. GCTTCGGCCATTGCCTGAGCCATGAATGTGGC 48178 29 100.0 33 ............................. CGCCGCGCCGAGGCTGACGTATTCCAGACGCCG 48240 29 100.0 32 ............................. TCGCTTGGTGTTGGTACCGCCATGACGGTCTC 48301 29 96.6 32 .........................C... CTCACCGCGCATCGCACCATTGCATTGCAAGC 48362 29 75.9 0 ...C..........C.......G.GGAT. | G [48375] ========== ====== ====== ====== ============================= ================================= ================== 8 29 95.7 32 GTGTTCCCCGCGTGAGCGGGGATGAACCG # Left flank : AGCGTGGCTCGATGGCGAACCGACACTGGCGCTGAACGGCATGAAATGGCGCGAAGGCGCGGCGGTGGGCATCGATGCCGTGGTATTCCATACCTTCTTCGGTGGTTCCACCGCCGACTGGGCGCCGCCGACCGACCAATACGCCTACTTCGACGACGTGCGCGTTTCCACCGAGTCGCCGCTGGCGCTGGTCGATACCGCCAAGCCCGCGCCGGATCACGCCAACCCGTTGCCGGGCTATACGCCATGGCAGGCCGGAACCGCCTACGCCGAAGGCCGGCTGGTCTATCGCATCGACGATGGCCGCCATCGCTACTTCAAGGCACGCTATTACGTGGCGGCCAATATCGATCCGCTGGTATCGAGCCTGCCGGAAGTCCACGTCGGGGTGTATTCGCCCAAGCTGGACAACGGCGAGAAGTGGATGGAACTGGCGCAGCCCTGGCTGTAGGCGGCCATCCGGAAACGATCACGGCGCCACCAGGCGCCGTGATCGCTCC # Right flank : GGCGCCGGTTCAGCCCTCGCGATCGGACCCGTCCTGTTTCAGCTTGAAATGCGCCACGACTCTCTTGAGCACCGTGGCCTGCTCCGACATGCCCTGGGCCGAACCGGCCGACTGCCCCGCCGTGGTGGCGATGCTCTGCACCACGCTGGAAATATGGTTGATCCCATCGTTGAAACAGGCGATGGCGGCCTCCTGTTCCTGCGATGCCTCGGCGATGCGGGCCATCAACTGCGACGATTCGCCGGTGCAATGAGCGGCCTTGCGCAGGCTCTGGCTGGTGCGCTCCACCAGCTCGTTGCCACGGTTCACGCTCTGCACGCTGCCCTCGATCAGCACGGCGGTTTCCTTGGCCGCCTTGGCCGAACGCGACGCCAGCGTGCGCACCTCTTCGGCCACCACCGCGAAGCCCCGGCCCTGTTCCCCGGCGCGGGCCGCTTCCACGGCCGCGTTGAGCGACAGGAAATTGGTCTGGAACGCGATATCGTCGATGGTCTTGATGA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1929-1227 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMF01000027.1 Chitiniphilus eburneus strain HX-2-15 HX-2-15_scaffold27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1928 29 100.0 32 ............................. GTGAAAATGACGCTCGCAATTGCAACTGATTC 1867 29 100.0 32 ............................. CCCCTTGGAAATTCCCCACACCATTTTCACAA 1806 29 100.0 32 ............................. CGAGGGGTGGCTTTAGACGTTCCGTCCGCGTT 1745 29 100.0 33 ............................. GTGTATTTGGACGAAATGGAACAGCTACTTGAA 1683 29 100.0 33 ............................. GGACTAGGGCAGGGCTACGTGCCGCCGTGCTAC 1621 29 100.0 32 ............................. AATTTAAGCCGGCTACAGGTTGGTATCGAACC 1560 29 100.0 32 ............................. GCCGCCGGGGCGTTGCCGAGCAGCAACTGCGC 1499 29 100.0 32 ............................. CCGACCACAGCGAAAACACCAAACAACACCAC 1438 29 100.0 32 ............................. GTGCGAGGACCACGTCCAGGTGCGCGGGCCAC 1377 29 100.0 32 ............................. CCCGGCTCGGCCTGACGTTCGCCGCCAGCGCT 1316 29 100.0 32 ............................. ACTTTCAATGCAGCGTCACGCACCAAGCTCGA 1255 29 86.2 0 ....................A...TGT.. | ========== ====== ====== ====== ============================= ================================= ================== 12 29 98.9 32 GTGTTCCCCGCGTGAGCGGGGATGAACCG # Left flank : TGGTCGCCAGCCAGATCGCCAGCGGCGAGGAAAACGCCCTCAACCTGCGCGTCCACGGCACCCGCGCCAGCCTGCGCTTCAGCCAGGAATCACCCAACGAACTGTGGTTCACCCCGCAAGGCGGCGAAACCACCCGCCTGACCCGAGGCCGTGTAGAGGGTGCCGCAGCCGCCCACGCCACCCGCGTCCCCGCCGGCCATCCCGAAGGCTACCTGGAAGCCTTCGCCCAGCTCTACCGTGACGCTGCATTGCAAATCACAGCCCAACAAACCAACACCCCACCGCCGTCCGAGTCGTTGGCGTTGACGACGGTGGATGACGGGGTGGCGGGGTTAAGATTCATCGACGCGGTACTGGCGAGTCAGGCGGGTGGGAATGCTTGGATCAAGCTGTGAGCGGTGGAACTTGAAGCATGGTGGAGAGCCTGTCGATCGGCTTGTAAGGTTGGTGGCTTGAGCCCGACCGGATTTCGCTCGCTGAATCAATATGTTGTAATTGGT # Right flank : CGATCGAAGCATCATCGTTCACACCTGCCTGGTATTTGAAGGTGTTGCATCAATCGAATGCGGCGGCCATGTTTCCCGCCGCTACTTGCGCGTACAGATACCGGATTTGTTCCGTCAGTACCCGGTGCGTCGAGAGTTCCGGCAGGGCCGTGGGGGCGTAAAAACCGGCGGCGGTGGTTTCGCTGGTTTGTTGCAGTAGTTCCCCGCCGTGGCTGTCGCACAGGAAAAACGCCTTCAGCGCGTGTGGCAGTTGCGGGGGATGGGCGTGTTTGTGTTTGTCCAGCAGGGCGAGTAGCCGGGTCGGGCGTACCGATAACCCGGTTTCCTCGCGCACTTCGCGTACCACGGCATCGGCGGGGGATTCGCCGATGTCGCACCAGCCGCCTGGCAAGGTCCACAGGCCGTCGCTGGCTTCGCGCACCAGCAGCACATGTTGATTGCTGTCGAGGATCAGCGCACGCACGTCCAGCTTGGGGGTGGGGTAGTGGCTGTCCAGGTCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6872-6107 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMF01000025.1 Chitiniphilus eburneus strain HX-2-15 HX-2-15_scaffold25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6871 29 100.0 33 ............................. TTGTCCTACAGGCGTAATTATGTCATTTCTCCC 6809 29 100.0 32 ............................. CCGGCTGCGTGCGTGTTAATGGGTGACGTGTG 6748 29 100.0 32 ............................. CAACTGAATCTTCCGCAGCACATCTTTGTGTT 6687 29 100.0 33 ............................. CCCATCGTCGAGAATGACGATATGCCGGTGGTC 6625 29 100.0 32 ............................. GATTTGCCGAGGTTGAACGCGGTCACCGCTAC 6564 29 100.0 32 ............................. TCGCCGCAGGCTGGGCACTACATCTACGACGC 6503 29 100.0 32 ............................. GCACGCTGGCGTGGTCGTTGACGCGCTCGTGG 6442 29 100.0 32 ............................. CGCCAGGATTTGGATGGTAGGGTTGCCGAGCT 6381 29 100.0 32 ............................. CACATTCCCGATTTGATGGAGCAATGGCATGC 6320 29 100.0 33 ............................. CCGCTGCGCTGCGCCCATTCGGCCAGCCCCTTG 6258 29 100.0 32 ............................. GTGTGGATGGTTCGAGTCCCGAAGGCATGGCA 6197 29 93.1 32 .........A..................T TGGGCGGCGGTAGGCCGGCCATCGACCAGCCC 6136 29 79.3 0 ..A.........C..T.A......CC... | T [6115] ========== ====== ====== ====== ============================= ================================= ================== 13 29 97.9 32 GTGTTCCCCGCGTGAGCGGGGATGAACCG # Left flank : CCGACGTCTACAAATGCCTGAAGGATGGCCAGACGATCTACGCCGACCGCCCGTGCGACGGCAAACGGCTCGACTACAGCGGCGGCGCGGTCTCCAATGTCGATGCCTTTCCCGTCCCCGACCCGACCCCCGTGCCCGCCGTGGCACCCACGCCCGAACCCCAGGCCACGGCCCCCGACCCCGGCGAACCCACCCGCATCGACCCCGACCAGCGTGCCACGGACCTGTGCAATATCGACAACCCCGACCGCGACACGGTGTTCTGCTCCCCCGACAACCTGCGCCGCCTCTACGACTGGCGCAACCGCCCGAGGCCCCCGCAACCTGCCGGGGGCGGGATCAGGATACTGAAATGAGCTTGATCTGGCGGGTTGGCGAGCCACCTGGCCAGGATTCCGGGCCGCCGCCGCTCGCCCCAAGAACCCCCGGATCAGGGCTGTAAGGTTGGTGGATTTGGGTGGGGGGAATATTGGTTGATGAATCAATGTGTTGTAATTGGT # Right flank : AGCCGGCCCCCGCTCCGCGTGATCCGCCGCGCAGCCCCCGCCTACAGTGCCGGATTCGGGCTTCGTGCGTGGATGGCTTCGATTGCGGCGTCCAGTTCCGGGGTGATGGTGACCGCCAGGCTGCCGAGGTTTTCTTCCAGTTGCGCCATGGTCGTGGCGCCGATGATCACGCTGCCCATGTACCAGCGGCTGTTCAGCCAGGCCAGCGCCAGTTGCGCCGGGGTCAGGCCGTTGGCGCGGGCCAGGGCGGCGTAGTCGGCGATGGCGGCCTGGACATAGGGCTTGGCGTAGCGCGCGCCGAAGCCGGGGAACCGGGTCATGCGGCCGTCGCTGGCGGCGTCGTCCTGGTATTTGGCGGTCAGCAGGCCGAATGCCAGCGGGCTGTAGGCCAGCAGTGCCACCTGTTCGCGGTGGCAGACTTCGGTCAGGCCGTGCTCGAAGCCGCGATGCAGCAGGTTGCAGACGTTCTGGATCGTCACCGGGCGCGGCAGGTTGTTTTC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //