Array 1 777682-776127 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZQS010000001.1 Streptococcus anginosus strain SK52 = DSM 20563 Sanginosus_SK52_DanaHsu_Sia_NO_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 777681 36 100.0 30 .................................... TATACTGTTTTAATCCTCACACTCAAAGTT 777615 36 100.0 30 .................................... ACTAGCGTTAGAGCACGCACTACAGCATAT 777549 36 100.0 30 .................................... CTCAAAATGTGTCTTACCATACAGCGCAAT 777483 36 100.0 30 .................................... ATTCCCGCGAGGAATATAAGTAATTCTCAA 777417 36 100.0 30 .................................... ACGGCGAGACCATGAGTGGTAAGTCTTATC 777351 36 100.0 30 .................................... TGATAAAGAAAGATAGGAGGTGAGTATCAT 777285 36 100.0 30 .................................... GCTTCTACTAATTGTTCATTCAAAGCGTCA 777219 36 100.0 30 .................................... TAATCAAAACATCCAGCAACCAAGGCGACA 777153 36 100.0 30 .................................... TGCTATCTTTCTGCTATAATAAAAGCAGAA 777087 36 100.0 30 .................................... ATTCTTCTTCAAAGCTCGACGAATGAGCTT 777021 36 100.0 30 .................................... TTGGCGGGCGCGTTTGTCAATCACTTAGAT 776955 36 100.0 30 .................................... AAAATAAGGTTTTGAATTTTCTTCTTCTTC 776889 36 100.0 30 .................................... AATTTTTAGCCCCTCCATTTCCTCGACAAA 776823 36 100.0 30 .................................... TAAAGGGGAACGTGTTGACGTTCGTGGTAT 776757 36 100.0 30 .................................... GTCCTAGCTCAAAATCTCTGAAACTCCTAT 776691 36 100.0 30 .................................... AATTTTTAGCCCCCCCATTTCCTCGACAAT 776625 36 100.0 30 .................................... CTCCTGTTTTGCGCCCTTGGTTGCTGATAT 776559 36 100.0 30 .................................... CCCAATATTCGCTTTAAATTGTTCTGTCAT 776493 36 100.0 30 .................................... GAAACTGGTCGATTATTGGGTAGTCCCTTA 776427 36 100.0 31 .................................... AAGTCGGCAAGTGATGATGAGTTGCAAAGAA 776360 36 100.0 30 .................................... TAAAGGAATGTTGAAAGAACCATTTTATAA 776294 36 100.0 30 .................................... CAATCAGATTATTAAATTCCCCTAATTTGG 776228 36 100.0 30 .................................... ATTATTTAGGATCAAAGCGAAGGTTGCATT 776162 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGTCTGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGATATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : ACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //