Array 1 385877-386897 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ454939.1 Bacillus xiapuensis strain FJAT-46582 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 385877 32 100.0 34 ................................ TATTTTCTTATTCAAGAATTAGGCTCTGAACATG 385943 32 100.0 34 ................................ GCGATAGTAAGACGGCATAGAGTCGTACATCAAT 386009 32 100.0 34 ................................ TATTTTCTTATTCAAGAATTAGGCTCTGAACATG 386075 32 100.0 34 ................................ GCGATAGTAAGACGGCATAGAGTCGTACATCAAT 386141 32 100.0 33 ................................ ATAGTTTTTTCAGCAGCATCTTTTCTTACTAAA 386206 32 100.0 34 ................................ ACTCTGGGCTTGACCGTTCGTCGACTGGTAATAC 386272 32 100.0 34 ................................ ATAACTGAATCAATTAAGACGGGCTGAACCATAA 386338 32 100.0 34 ................................ ATTGCTAACTTACAAGAAAAAAAGGAGGGTTGAT 386404 32 100.0 35 ................................ ATGTGCGGGCGGATCGCGGCAACGAATGGGTTGTG 386471 32 100.0 33 ................................ CCGGAAGCAAACAGCGATACAGCCTATACACGC 386536 32 100.0 35 ................................ GGTTTTTGTGTTTTTGTACTGCAACCTGGCAGCCG 386603 32 100.0 34 ................................ GATTCGCACGTTTTTATTTACGGCGCTCTTAGCC 386669 32 100.0 34 ................................ AAATCATCGGCAAGAAAAATGGATCAATGTTTAT 386735 32 100.0 33 ................................ TCGATTTTAGAATAATAAGAACGATCAATCCCA 386800 32 96.9 34 .................A.............. TGCTGTTGAGTTAGACGGCGGGAGGTTGGCTCGG 386866 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 16 32 99.8 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GCCTGTTCTGCTTAGGCAGAGCGGGTTTCTTTTTCATTCTGCAAGACGTGTCACCCAAACAGCCAGCCCCTCCTATCTCGAAGCAATAAGCGAAAGCTGGATGAAATGCTAGAAAGAACGGATACAAATACAAAACAATACCCTAATATTCTCAGCCAAAGTTAAAATCCCCAAAAAACGGCTCCGTATCCAGAAAAATAAAAATTACTGAACAGAAATGCGTAGACCTCTTCAGTTTTCCAAGCCGGCCTGATATTATAAAAACATAACCCTATCAGCAATAGTCAAATAAAAAAGGAACAGCACTTTCCGCTTTCTAACGTTCTTGCTTAGTGCGAACCATAAGCGCACATAAAATCCCAGGGACATTCGCACCCGAATTCTAAGATGTTTTTTCCTTTTTCTTCAACTTATTATAAATTTATACCCTGTCTTTTAAAGAAAAGTAGCGAATTTTGGTGAAAAATGTCGATTCACCCCCATTTCAAGCCAAAATCGCC # Right flank : TGAGCCTGCTTTAATACTAGTAAAAGTGGAATTATCAGATTATCTACACTGGCGTACCCCTTCCCAATTCACGGCACGCTTGAGTATCTGACCCCTGTTCAATATAAAACCATAGATTCTTAAAAATATTCAGCATAGCGCGGACATTCCAGCAACTTGTATTTTCTGCAATTTATCTCCTATAAGAACGCGGAGCGCATATGAAACTATGACTGGAGAAAAAAAGTCAATCCCAACGCCGGTTGCCACATTCCTATAAAGGGATGGATGAAAACAGCTATAGCTTATGAGGAGGAGAAAAAGATGTCGAATTATTGGCAGCGTCCAGAAATCAAAATCCCTAAAACGAAAAGCGAATGGATATGGGATATTATAGGCTTCTTCTTTTTCTTTGCCTCCATCTTGTTTCTGTTCATCGTTTGGGGGAACCTTCCAGAAAAGGTGCCTGCCCATTATGGCTTCTCTGGGGAAGTAAACAGATGGGGATCAAAGTGGGAACT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 854294-856780 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ454939.1 Bacillus xiapuensis strain FJAT-46582 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 854294 32 100.0 34 ................................ TCATCATTTGTCCCTCCTATTTTTTAATAAAAGC 854360 32 100.0 35 ................................ AATAGCTTTTTGAGCGCCAGCCTTTTCGCTTTCTG 854427 32 100.0 33 ................................ AGCTTGTAAATGGTTAAAATAAACGTTAAACAT 854492 32 100.0 36 ................................ ATTTAGTAACTTATCAAAACAAAATATTGTATGATC 854560 32 100.0 37 ................................ TACAACCGAGGTGTACGATTTGAAAGCGGAGGACCCA 854629 32 100.0 33 ................................ TATTTTAACTATGGAATTACAAGAAGTTGAAGA 854694 32 100.0 35 ................................ CTCTGCACGCTTATGCAGTTTATCGCCGTATTCCT 854761 32 100.0 34 ................................ CGTCATGAATAAAGCATCTGATTTATCAGTATTA 854827 32 100.0 36 ................................ CACACTTAATATTCCACATATCCTACACATACATTA 854895 32 100.0 34 ................................ ATCGCTAAGTATCGGGCGAAGCCCCTCAAGCACG 854961 32 100.0 33 ................................ TATCCCGTTTAACTCATAATTTAATTGATATGT 855026 32 100.0 35 ................................ TATTGCCTACTTTATAGGTTGTATCTGTTGTTTGT 855093 32 100.0 35 ................................ GCTATCAACTCCTCCGAAGCATCCTCGCAAACAAC 855160 32 100.0 34 ................................ CGTTATTGTACGTAACATTGAATCAACTGACTCA 855226 32 100.0 35 ................................ CAATTGGCCACGTTACATCTTGCTTGTAAGTCCGC 855293 32 100.0 34 ................................ TTTGTTGTGATCCCGTTTAGATTGTCTAAATATC 855359 32 100.0 33 ................................ TTTTTAACCATCAAACCAATATAAGCCTTTGCA 855424 32 100.0 33 ................................ CACACGGTCAATAAATTTATTGACTTTTGACAT 855489 32 100.0 36 ................................ ATTCGTCATGCTAGGATGACGAGAAGATATAACCAT 855557 32 100.0 35 ................................ AAACTGAATCAACTAACAACGATGCACAAACAAAT 855624 32 100.0 34 ................................ ACTATGGTTTGTTTTCTTTGTTCTCATAATCCAA 855690 32 100.0 34 ................................ GTGTTTCGGGTTTCGGTTTTTGTACTGCAACCTG 855756 32 100.0 33 ................................ CACATGCAAATGGGGAGTTTTTTCGTCCATGTG 855821 32 100.0 33 ................................ GGGTCAGCGGAATCAAAACAACATCAGATTTGC 855886 32 100.0 34 ................................ TCGTTAGGGTACTCGCCGAATCTCTCGTAATATC 855952 32 100.0 35 ................................ ATATGCTCTTTAAGACGCTTAGTGACCTTATCATT 856019 32 100.0 36 ................................ ACAAACTCCAATAGGTTAATTGAATCAGCGTTTTCA 856087 32 100.0 34 ................................ GCAATGGTCGTGATGAAAAAGTTTACGAAATTGC 856153 32 100.0 33 ................................ AAGGAAGCCATGACGAAATTTAAGAATGGCGAA 856218 32 96.9 33 ...........T.................... CGAACGCTATGGCGAGCAAAATATTGCTTATGC 856283 32 100.0 34 ................................ ATCTGCAAAATCGATGATCGGGCAGAGGCAGACC 856349 32 100.0 36 ................................ AACCTAGAGCAAGACGACACTTTGTCGATGGTCAAC 856417 32 96.9 36 .....................C.......... GGGAGCAAGCATTTGAGGTTGTAGAGTGCCGTACTT 856485 32 100.0 35 ................................ ACCCCTTTAGCTTTGAGTTTATCAACATATTTTTT 856552 32 100.0 34 ................................ AAGGCGCCAAATGGCGAAATCCTTACAGAATGTT 856618 32 100.0 34 ................................ TACGTCCGTAACAACGTAAAGGCTTCTCAATTGC 856684 32 100.0 33 ................................ GTACCACTGCTGACCTGGTTGAAGATACTCAAG 856749 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 38 32 99.8 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CTTGACGAATACCCGCCATTCTTATGGAAGTAGGTGAGAAATTTGCTAGTCCTCATCACTTATGACGTCAGCACAGCCCACAGCTCTGGGAACAAGCGATTACGCAAAGTAGCAAAAACATGTCAAAACTACGGCCAGCGAGTCCAAAACTCAGTATTTGAATGCATCGTAGACGCCGCCCAGCTAGCTGCCCTAAAAATAGAACTAACTAGCATCATCGACAAAGATCAAGACAGCCTCAGATTTTACAAACTAGGCAATAACTATAAAAATAAAGTAGAGCACATAGGCGCCAAAGAATCCATCGACCTAGAAGGACCTTTAATACTCTAGTGCGAACCTGAAGTGCACACGAAATCCCTGAAGCATTCGCACCTGAAATTCTCAGATTTCCTTATAAATTTTGTAATATTTGTAACATTGGTCCTTGCTTTCTTGAGGAAATAGCGTGTTTTTGAGCAAAAAACACTTCTTTCACCCCTTTTTGCCCAAAAATCGCT # Right flank : TTAGAGCTAAAAGGGATCGTCTGGGAGACGGAGCGGCATACGATTTGTATTTGACGCACGACGTGTTGTTTCAGCTGTCACACATTATCAAAACCATGCAGTAAAAAGGCTTAAAAACAGTGGACTACCAACGCTTTCTTATAAGTAACAGTAAATTGGCAGATAGTTCAGGGTATGGGGCTACAGCCGGAGTCTGCGCCGCCCTACCCAATGAATCCATTGAAGATAGAGAGATAGAAAGCGTAAATAGGGTTCACTACCCTAAATCATTAAAAACTTCCTATTCTCTATTGGATAACGCTAAAAACGAAACCGAAAAGAGGAAAACGCAAATACGAAAGAACGTGCTGAATAACTGGCTTAAAAACTATTACGCTATGAAAATGCAAGCCAAAGCCGTTCATGCCAAAAACAGCGGCGAAAGCACCAAAACCAAAGCAGAAAGAGCCGCCGAGTGGCTGACGTATTTTCATGAACGCCTTCAAGGGCTGCTCGAAATG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1947775-1946812 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ454939.1 Bacillus xiapuensis strain FJAT-46582 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1947774 32 100.0 34 ................................ AATAAAGGTGCTGGAAGTTGAAATTTTGGAATAT 1947708 32 100.0 34 ................................ CATCGTTGTACGCAATATTATATCAACTGACTCA 1947642 32 100.0 34 ................................ CACGAGAGGATTACGAAGCACCGGAAGATAAGAA 1947576 32 100.0 35 ................................ GAAAGCATTTTGAGTGGGTTGCGCATAAAGCTAAA 1947509 32 100.0 34 ................................ TTTTTCGCCGGAATCTCTTCTATATAAGGAGACA 1947443 32 100.0 34 ................................ AGTGATCAGACAAAGTGTGTCATGATTAATTACC 1947377 32 100.0 33 ................................ TCGATAAAGAATTTATTAAGATCGTAAAAAATA 1947312 32 100.0 35 ................................ TGGTTTACCTATTATACAAAGTCGCTAACCACCGA 1947245 32 100.0 36 ................................ GTACCTTCGGAGTATCAGCTGAGGATGCCCGCGCTG 1947177 32 100.0 35 ................................ GAAACTAAAGTGAGTTTAAGCGATCTTCCGAAGCT 1947110 32 100.0 35 ................................ TCTGTTAAATTGGCTGGTTTTTTAGCTATTTATGC 1947043 32 100.0 35 ................................ GGGGATACGAAGACGGAAAAGTGCTAGGCAAAGGC 1946976 32 100.0 34 ................................ CTTGCTGGCGATTGCGCGTCTTATTTCAGCTAGG 1946910 32 100.0 35 ................................ ACCTCCCCAGCTAATAGCCAGAGAGGTGAGGATTG 1946843 32 81.2 0 .............C..A...TC..G......C | ========== ====== ====== ====== ================================ ==================================== ================== 15 32 98.7 35 GTCACTCTCTACATGAGAGTGTGGATTGAAAT # Left flank : TGAAACAGCACCGCTTTACGCTCTATCGGCTATATCCTACCATTTTGAACTAATGAGGGGGCAATAGGCCAACTAAGGCATCCTAAACAATCGGTTATGCCACAGTAACCATAGCTAGATTCCGTCAACATTCAGTATTCATAAGAATAGATGAACTTATTGTTTCTATAAGTATTTATGGAGAAGAGCAGTTTAATTAGTTTTGCTAATTAAAGCTCTTTTTTTGAGTGTACTAAAATATAGAGATCAATAAGTAATAAATAATGAAATGCTATTTATAGAGATTGCAAGGACAATAGATAAAAAAAACAGTGTCGTCTAATGGATCACCATCAGGACGTATAATAGCATGGTGCGAACCCCAAGCTCACATAAAAAACCAGGGGGATTCGCACTCTTTTTTCTCCTTTTTAGAGGAAAATCCACGAAAGGCCAGTTAAATCATTTTCAGTTAACACAAAATATAGTATGCTTAGTAGGCGAGGCTACCATATCTCGCT # Right flank : CTGCATAAAAAAAAGTAAAACCATCACTTAATTAGCAAGCATTATTTGCTAAAAGTAATGGTTTTTATTTTTTACAACATTGATTTCTAATTCGTTTTTCTCTTTTTGAAAAAATTATATATAAGAAAAATTAATGCCACTATAAAAATTAACCAACCAACCTGAAATGCTATATCAAACCAATTAACTTCTGAGATTTTCATAAAAAACGCCTCCTTTTTTAAAAGTATCAAAATTTGACTGTATACGTTACTGAATGGATTCTGCTAACACATTCAATTAGTTCGGCTTCTGCGAACAAGATAAATGAGAAAATAGATAAAGAATATCACTCTTCATTCCACTTGATGAGTGTTTCACCACAACCACATTCATTGAGTCTTTGCCCTTAGTGAGCCTCCTCATTTTATAAATGCTCCATTTCTAACAGATCTTTACTCCATTGCAGGCTCTAAACTTAAAGTTGGTCGCTTTCAGCACGCGATCCCGTATTCTTGGAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTACATGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 4 2095863-2096954 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ454939.1 Bacillus xiapuensis strain FJAT-46582 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2095863 32 100.0 34 ................................ AGCAATTGATAATCAATACTATATATTTAAAATC 2095929 32 100.0 32 ................................ TCAGGGAACAGTCTATTGATTTCAGGATACTT 2095993 32 100.0 34 ................................ CGAAGCATTGAAGGAAAATGAAAAATTAAAAGAG 2096059 32 100.0 35 ................................ TTACCCAGATGCCTGTCATAATAGGACAGGGTCCC 2096126 32 100.0 33 ................................ AAAAGCAAATATACGGAATGTTAGGCGAGGAAA 2096191 32 100.0 34 ................................ AAGCCCGCCGTCTTGGTTGCCGCAGTCGCCGTGC 2096257 32 100.0 35 ................................ GCGTCTCGACAGAAGAACAGAGCGTGAAGGGGTAC 2096324 32 100.0 35 ................................ TTGCTCGCAAAGTTGACGATCTCATCGAGGTTTTC 2096391 32 100.0 35 ................................ AAAAAGTTTCTGGGAAAGTCGGGTTTGCCAACAAA 2096458 32 100.0 33 ................................ CGTTGACGTTGACTTTGAAAGCCTGTTAAAAGA 2096523 32 100.0 35 ................................ ATTAACTGCATGGCTTCTTTCCCTTGGGACGTTTC 2096590 32 100.0 37 ................................ TCCTTTTAGCCCGCCACCTTTGCGTGACTGCGTTGTC 2096659 32 100.0 35 ................................ CATAAGTTTTGATCATGTTTTGGATATGTAATGCT 2096726 32 96.9 34 ...........T.................... TCTATAGGCTTTTAATTCTTGACGTATATCGCTT 2096792 32 93.8 33 ...........T.......C............ CGCTTACATCGGCTGCAAAAGCTCGTTTAATCG 2096857 32 100.0 34 ................................ ACCATCATGTCTTTGGCATCGTCTGCTAAATCTC 2096923 32 93.8 0 ............T........C.......... | ========== ====== ====== ====== ================================ ===================================== ================== 17 32 99.1 34 GTCACTCTCTACATGAGAGTGTGGATTGAAAT # Left flank : AGTAGAACCTTAGAAATCAATGTTTGCCTAGCGCCTTCTAAAAGCAAGAAAGTTCCCTCTATAAACGTACTAATATATTTTACAATTTTCACTGAAATGGACTTTACACTTTTATCTCCATTGGTCGCTACTTTATTGAAGGAACAGATAAGTTCGCCTTGCTGCAAAATCCACAATTCCTTTAATATCAAGGCTGTTCATCCTACCTGTTGAAGCTCCATGCCAAGCGGGCTGCGAAAAAATAAAATGTAAAACTCAACTAAGATTGCAAGGGCCACCGGACGATAAATATGAGCTTCTGGATAACGGACAGCCGCATTTTGCAATACACAATAGGAAAGATCATAGCATGGTGCGAACCCCAAGCACACATAAAAACCCCGGGAGATTCGCACTCTTTTTTACCCTTTTTAAAGCTAAAGCCTTGTCAATCTGACTCAGCCATTTTCAGCTAACACAAAATATAGTATGCTTAGTAGGAAAAAATACAATATCTCGCT # Right flank : TATCAGATTGTATCTACGTCAATATCTTGGACACAAAAAATATGTAGGTAGGGTGAATCGAAGCCCTTATATCCTCCTTCGATTAGGCAGCTTCCTATCAACACAGATCTTCTAATTGTTGCGGTGTTAAATAGTTGATTGCCCCATGAATCCGTTTCCCGTTGTACCAAGATTCGCTGTATTGAAAAAGAGCGATTCGAGCTGCTTCAAAGTCTATATAGGTCGTCTGATAGACTTCTTCTTTCTTTAAAGTGGCATGAAAAGACTCAATGCAGGCAATATGTTGTTGTAGGGTATAAAGAAGATACTAAAGAACTTCATCAACCTATATTTATGAAGTTGGTAAAAAAATATTGATAAAGAGTTTACTATGATTGTAGGAACTTTAGACGGAGAAGAAGTTGTTGAGGCTATGATCAATACAGAAACTCAACAGGCTGAAAAAATTGAATTTAAAGTGATAGTACTATTGCTTTAATTCAAAAAAATACAGCAGCTGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTACATGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 5 2098486-2099834 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ454939.1 Bacillus xiapuensis strain FJAT-46582 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2098486 32 100.0 34 ................................ CACGCCTTTTTCGCCGTATTGACGTACAAAATGA 2098552 32 100.0 36 ................................ TGCGAACTCCGCGTACCCTTGCGTCACGAAGTCGTT 2098620 32 100.0 33 ................................ TCGCAATGGAGCGCAATCTGCCCGGCTGCCCAT 2098685 32 100.0 33 ................................ ATCTATATAAAAATACATTTAACACATATTCAG 2098750 32 100.0 34 ................................ GCACACCGATAGTTAATAATTGTATGCAAATCGC 2098816 32 100.0 35 ................................ TCAACTTGCTCCGCAATCAGGGCAAGCTGGGCTTT 2098883 32 100.0 34 ................................ GATTTGACGGTTACGGAAACCTTGAAAGTCTACA 2098949 32 100.0 33 ................................ TTTAAAATTTTTTGTTGACTCCTCATCAATACC 2099014 32 100.0 33 ................................ GATTTGACGGTTACGGAAACCTTGAAAGTCTAC 2099079 32 100.0 34 ................................ CAGAAAGAAAAAGGAAGAAGAGGCTAAACAAAAA 2099145 32 100.0 32 ................................ ATGTATGATTTTCGTGGCCGCCGCTTCGATGT 2099209 32 100.0 35 ................................ ATGTGCGGGCGGATCGCGGCAACGAATGGGTTGTG 2099276 32 100.0 34 ................................ AGCATTTAATCCGGCTACTTTTGCGCTGTCAAAG 2099342 32 100.0 35 ................................ GTCAATCCGCCGTTGATCTGTTGCTCAAACAACTT 2099409 32 100.0 33 ................................ CTCCAGAGTCTCTTGTGCTAGATGGCGATGAAG 2099474 32 100.0 35 ................................ AATTGATCGCCCCTGGCACGTCCAAAAGCATTTGC 2099541 32 100.0 34 ................................ TGGAAAGGCGTAAGGAAAAGGGGAAACGTTATTG 2099607 32 100.0 35 ................................ ACTAGCTTGGGAGCGATCACACGAACACCCCCGTA 2099674 32 100.0 33 ................................ GTCGATGAATTTAATGTATGTTGCGTGATTCAT 2099739 32 100.0 32 ................................ AAGAGTTCGCAGATCGGCTTGCAAAAGACAAT 2099803 32 81.2 0 ..GT..............A..C....C....C | ========== ====== ====== ====== ================================ ==================================== ================== 21 32 99.1 34 GTCACTCTCTACATGAGAGTGTGGATTGAAAT # Left flank : TTCGGATTAGTTATGCTTTTCACCTTTAAAAGTATCTTTTATTAAAAGGACACAATTTATCTAGTCTCTTTTTTTTACAGTGGTACTTTGTCAAATTAAGTACAACAGTTCTTCCTGAAACGCCTCGTGTGCAGTTTTCCAACCAAGACATTTTCTTGGTCGATGATTGATAAGTTGAAGTGCTTGTTTCATTTCCTCTTCTGTTACTTGATCGAAGTTTGTTTTCTTTGGAAAAAATTTACGTAAGAGACCCTTTCCATTTTCATTACTACTACGTTGCCACGAAAAATAGGCATCCGCAAAGTAAACTTGAATATCCAGTTTGAATAGCGCCAGGAAAGATCACAGCATGGTGCGAACCCCAAGCACACATAAAAACCCCGGGAGATTCGCACTTTTTTTTGCCCTTTTTAAAGCTAAAGCCTTGTAAATCTGACTCAGCCATTTTCAGCTAACACAAAATATAGTATGCTTAGTAAGCAAGAATACTATATCTCGCT # Right flank : CCTGGATAAAAACAACTAAAACCATTACTTAATTAGCAAACATTATTTGCTAAAAGTAATGGTTTTTATTTTTGGCTCTATACTAACTGTTGGAGTTACCACACAAATTGCCCATAAAAAAACACACGCAAACATCCAATTCTTTTATTCTGAAATTTTTGGAAAACAAGCAAAGCTTGGAGTGGCGGGCAAATGAATTTTACCATGAAAATCTCTGGCCCTGAAGATGTATTGTTTGAATGGCTGACATACCTCTTCTGTAAAAAACGCCGGTATGCCTGTCGGACTGGGAGTGATTTGCGGAGAACCATTCTTTGGTTCAACGCTATCAGCGCTTTTCTATTGAATGACTTCGTACAATAGAATGCTCAAGACGTTTAAGGAAGCAGCTGAGCAATTTGGCGCTTCCATATCGGCTGTCCTGCGAAGCTTTGATCAATGAAATAACAGAAGTTCAGAAATTACCCAGGGTGATAGCCATTGACGAATGCGATAGAAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTACATGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //