Array 1 64912-69515 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJLD01000002.1 Corynebacterium striatum strain NBRC 15291 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 64912 29 100.0 32 ............................. ATTTGGGATGGGTCTGTGCGTTCAGGTAAGAC 64973 29 96.6 32 ............................G TGATGGGGTTTAGCCAGAAGCAGAAGGATGCG 65034 29 100.0 32 ............................. GGGACCAGGGCCACGGCCTTTAGGAGGCCTTC 65095 29 100.0 32 ............................. AGTTTGTTAGTGGCACTGCTACCGGCTAGCCC 65156 29 100.0 32 ............................. ACCGAGCCGATGAACACTAAAGCTCGGTAGTT 65217 29 100.0 32 ............................. ACTAAAGCTCGGTAGTTCCCACACACAGATAG 65278 29 100.0 32 ............................. GTTCTCACCCTTACGCCGGAACAGGAGCGTGA 65339 29 96.6 32 ............................T TTGAGCAGATGCCGGGCCGTGTGGGGGAGATT 65400 29 100.0 32 ............................. ACCAAAAGGGCTATTTCCTTGGTATGGAAATA 65461 29 100.0 32 ............................. GTTCTCACCCTTACGCCGGAACAGGAGCGTGA 65522 29 100.0 32 ............................. ACCCGCGTTGCGCAGTTCACGGAACAACCAGT 65583 29 100.0 32 ............................. GGGTTCTGGAAATGGAAAGGCCCAGCCCACCA 65644 29 100.0 32 ............................. CCTGGATGAGGTAGCGCACGACGTCTTAGAGA 65705 29 96.6 32 ............................G GTCTTCACGCGTGAGTTGCTTTGCTGCGCCTC 65766 29 100.0 32 ............................. CTGACCGGCGGCCAGACCGCGACGTCCTACAC 65827 29 96.6 32 ............................T CTTTTTGTTGGGGCGGTGGAAAGACTGATAGC 65888 29 96.6 32 ............................G GTAAAGGAAATGTACTGGGCAGGCCGAAAGGT 65949 29 100.0 32 ............................. TAAAAACACAAAGACCGGGAACACAAATTTAA 66010 29 96.6 32 ............................T AGGGATGCGGTCACCCCGTTGGTGATTCGGCC 66071 29 100.0 32 ............................. ATCGCATTCCACCGTGTGAAACCCAACGTACT 66132 29 100.0 32 ............................. GGGCGCTGCTTCCACCCATCAGCAGGACCAGG 66193 29 100.0 32 ............................. AATGAGGCCAACCGGCCCCATAAGCACAGCCA 66254 29 96.6 32 ............................A GCATGTGCGCGGCGCTCGACGGCGGGAGCATC 66315 29 100.0 32 ............................. TCACCACACAAGGCCCAGACTTCCAAGCCCTC 66376 29 96.6 32 ............................G CCACAAGCGGCGGGCCATATCCTAGGTATTGA 66437 29 100.0 32 ............................. GTGGTGTACCACTACCTGTCGCGCAACCTGCC 66498 29 100.0 32 ............................. TACTGGCATCCGTTTGGGTGTTCCTGATGGGT 66559 29 100.0 32 ............................. GACCTGGGAGCAGACCCACGCCACGGCATCAG 66620 29 96.6 33 ............................A CCATCACACCGGCCGCCCCCACCGTCTTCACCG 66682 29 100.0 32 ............................. CATGGGTAAATCCGGCGGTGTCCGGCGTGAGC 66743 29 96.6 32 ............................T GCTCGCCGTAGCTGCGTGTATAGCTTTTGGGT 66804 29 96.6 32 ............................T CCTCCGCTGGGGATGGGGAGAGTAAAAATGAA 66865 29 96.6 32 ............................G TCTGGTTCGCGCATGCTTGAGACGTTGAATGC 66926 29 100.0 32 ............................. CCGACGATGGGGGCGGCTGTCGTGGTTGCCGA 66987 29 100.0 32 ............................. ACAATCGCAACAACTGCTCATGAGACTCACCA 67048 29 100.0 32 ............................. AACTTCAGCCGACGCCTGTGGGAAACGATCGG 67109 29 96.6 32 ............................G TCGGCGCACTGTCCGAGGCTTTAGATGGCTTC 67170 29 100.0 32 ............................. GCAGCGACTGCAACATCTTGGGAGACGTGGCC 67231 29 100.0 32 ............................. CATGACTAAGACCCTCGCAGACATGACCCCAG 67292 29 96.6 32 ............................G GCTTCAGCTGATGAAGCTGGAACCGCGTTTCA 67353 29 100.0 32 ............................. ACTTCAGACTGCGAGCCGTGTTTGAAGCCCGC 67414 29 96.6 32 ............................G GCCACGCGGCCTGCACAATCTGTGATGTTTTC 67475 29 96.6 32 ............................T CCCAGCTCGCGGGCAGCATCCGCCGCGCCAGA 67536 29 100.0 32 ............................. TCCGTAAGGAAAACGCGAAGTACCGTACCGAG 67597 29 100.0 32 ............................. ATCCTTAAGCGCCGCATTCGGGTACGTGCCAA 67658 29 100.0 32 ............................. ACAGCACCGACGCTGTTCTGAATCTGCTTACC 67719 29 100.0 32 ............................. TCGGCAAAAAACTAGCCCCCGACCGATTCCCC 67780 29 100.0 32 ............................. TCGACGCAATCACTGGCGACTGTCATGAAAAC 67841 29 100.0 32 ............................. ACTCTGACGGCACCGACCATCAAGGAGTACGA 67902 29 100.0 32 ............................. ACCGGCTTTAACTGGAAATGGGAGGAAGCATG 67963 29 100.0 32 ............................. GTAAAAGGGGGAGGTGCCTGATGGACTCGATT 68024 29 100.0 32 ............................. CAGGGCAATGACCCGACCGCACGCACCCTCAA 68085 29 100.0 32 ............................. GATTCGTAGACGAGAAAGACGCGGCTATCGTC 68146 29 100.0 32 ............................. CCTGTTGAGCTGCTTTTTGGCTTCCAATGGGG 68207 29 96.6 32 ............................T TGAGTAGGGCGTTTAGGAGTGTGGTATCAACC 68268 29 100.0 32 ............................. CCCACGACTTGGCCCCAGGACACGATGTCATC 68329 29 96.6 32 ............................G GAGGGTGCCCTGTCTGCCAACAAGATCGGCAC 68390 29 100.0 31 ............................. CCCACGCGAACAGAAGCTAAAAGAGCGTGAA 68450 29 100.0 32 ............................. ACCCCGCCGCGCCCGCTGGTACATGCTCCCCA 68511 29 100.0 32 ............................. CCAATACCCATACGGGGCGAAACCTGAATCCG 68572 29 100.0 32 ............................. TCAGCACCGACGCGTGGGAAAGTAGAAATGAC 68633 29 93.1 32 ..........T.................G GGTTGGTTTACCTGTGATTAGGGCGTGGAGTT 68694 29 100.0 32 ............................. AATGCGCCGTCCACGTCCGGCCGTGAGCTGGC 68755 29 100.0 32 ............................. CAAGCAGGCCATCCACACAGCTGTTGTGGAGC 68816 29 100.0 32 ............................. ATTCCGGCAACCTTGGATAGGATTTGCTCGGA 68877 29 96.6 32 ............................T CTACGCCTGCACCAGCCCCACCTACCGACAGG 68938 29 100.0 32 ............................. AAGAAAGGCACCCGCGACGGCGGCAACCGTCC 68999 29 96.6 32 ............................G CGACCGGCTGGAACGGTGCTCTAGCAAAGACT 69060 29 100.0 32 ............................. AGCGGTATCCCATGCGGAAGAAATCTTATTAG 69121 29 100.0 32 ............................. ACACGGCACTCGAAGATGCGAAAACGGATCTG 69182 29 96.6 32 ............................T TACGCGATATGGAACTGGATAAGCTCAACCAG 69243 29 100.0 32 ............................. CAGGCGGAGAAGCCATGTCTTATGAATACGCG 69304 29 100.0 32 ............................. TTCACAAAATTCTCTCGGTCTGGATGCGCGCT 69365 29 96.6 32 ............................T ACGCTTGTGTGCGCGTACGGGATGCCGGGTAG 69426 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCAGCCGCT 69487 29 89.7 0 ................T.....A....G. | ========== ====== ====== ====== ============================= ================================= ================== 76 29 98.7 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGCGCTGCCCGAAATGCTCGTCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : CTTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTCAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATACGAGCAATCCCCATTTATGTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGGGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGGGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //