Array 1 626052-627558 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXCU010000001.1 Prevotella nanceiensis strain SCHI0010.S.3 Contig_1_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 626052 47 100.0 31 ............................................... AGTACCCCCTTATTGGCTTTTTCGTGAGATT 626130 47 100.0 29 ............................................... CTAATATGACTGATGCAAATACATTTCAT 626206 47 100.0 30 ............................................... TCTCCACAGACAATTATGCCAATATTTGGC 626283 47 100.0 30 ............................................... TCTAAACGAGTCTATACCTGCAGTGTCTCT 626360 47 100.0 29 ............................................... GTTCGTCTATGCGAAAAAAGACAAAATAG 626436 47 100.0 30 ............................................... CAACGCAAGGATGCTATTGAGAATCAATAC 626513 47 100.0 30 ............................................... TAATGAATTGAACGAAAACAACCCTTATAC 626590 47 100.0 30 ............................................... GGGTCAAGTTATCACAGGTAATGTCGTTCG 626667 47 100.0 30 ............................................... GCTGCAACTATATAAAAAAGCAAGTTTTCT 626744 47 100.0 30 ............................................... AGAGAACCAAAACTATAGTATCAAAGCCGT 626821 47 100.0 30 ............................................... GCGTTTTTGATAAGATAAGCAAAGACGATT 626898 47 100.0 30 ............................................... GTCTTTGCGAAAAACAACTTGATAACATAA 626975 47 100.0 29 ............................................... TAATAAAGATAGATTTGCATCTCTTTCAC 627051 47 100.0 30 ............................................... GAAATAAAGGCTTCAAAGACAATCACACCA 627128 47 100.0 29 ............................................... GTGCGCCTAAGCGTGAAACAGCACCGATA 627204 47 100.0 30 ............................................... GCGTTTTTGATAAGATAAGCAAAGACGATT 627281 47 100.0 30 ............................................... AACTTTGATAGTTACATTGATTTTGCTAGT 627358 47 100.0 30 ............................................... GGTTGCAAATTTCACTCTTGCAGGTGCTTT 627435 47 100.0 30 ............................................... ATAGTAGCATTTTTAATACCATCCCAGGTG 627512 47 78.7 0 ........................GG..AC.TT.GT.....GG.... | ========== ====== ====== ====== =============================================== =============================== ================== 20 47 98.9 30 GTTGCTTATGATATTGCAAAGATATACATTTGGAAGCAAATCACAAC # Left flank : TCTTGCAAAGTGTTATAGTGGCGAAAGCCGTAAAATATATTATCCTTCTTTTCCTTAATGCAAAGATTAAGCGAGTATAGAATTATGTGGGTAATGGTTCTTTTCGATCTTCCAACCACCAACTTAAAAGAAAAGCGGGACTATATTCTTTTCCGAAAGAATTTAGTAAAAGATGGTTTTATCATGTTTCAGTATTCTATTTACGTCCGACATTGTGCCAGTAGAGAGAATGCTGCAGTGCATGTGAAACGTGTAAAATCCTTTATTCCTCGCTCAGGAGAGGTTTGTATTATTGTTATAACGGATAAACAATTTGGTGAAATAGAGATATTTAGTAGCTCTGAACCGCAGAAGCCGAACACACCTGGAGTGCAACTTGAATTATTTTAGAATATAAAAAAAGAGTCCTAATATTAATATTGGGACTCTTTTTTGTTGCAATTTTTATTTTACATAAACATAAGATATATTATTGAAGTTCAATTAAATATATCATTCGA # Right flank : CACCATAACGCATTTTTATTACTCTAATGAACCATTGCGAGATATGAGGGTGTAGGACGAATGTAAATCCTTTGTAGGGCAGTGTTTGTGTTCTTCCTGTCTAAAACCATTACAATTACAGACTAAAATCATTGCTTTTATGCCCCAATTCCATTGCTTTTATTGTCCAAAAGCAGTGAGTTTACAAAGTAGAAAGAATGGCGATGAAAAAGGATTTAATAGGAGAGAAAAGCGAATGGGGTATATTAAAGCCGTGAAAGGGTAGGATTGTGGAGTGATTAACTCTATAACGTGTGAGATAATAGAATGAAAAAAGCTCTCTAACGACCTAAAATCATTAGAGAGCAAATGTGTTATATGATGTAACTTTCTATGCCACTAAGCGCCAAATAAAGGCGATAAGCATCGTAACAACAATACCTAAGGCGAGCGGAAGCAAGGTTGCAAGAGCCGTCCACTTCACACTTCTCGTCTCTTTATATATCGTGTAGATCGTTGTA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCTTATGATATTGCAAAGATATACATTTGGAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //