Array 1 9081-8092 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRA01000054.1 Staphylococcus pettenkoferi strain DE0475 NODE_54_length_16942_cov_117.952130, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================================== ================== 9080 36 91.7 30 ...........................G.....TT. AAATTAAAGAGTTTGTCTTAAGCGTGGGTG 9014 36 91.7 29 ...........................G.....TT. TTTCCTAAGGTAGATAACTTTCTTAATAA 8949 36 91.7 30 ...........................G.....TT. TTCTAATCGCTTTAAGAGATTACTCTCCAT 8883 36 91.7 59 ...........................G.....TT. TACTCTGTAATTTTAGGTATAACTGAGACTAAACTATCAGACGTTTCTAACTCTGCACC 8788 36 100.0 30 .................................... GCCAACCTGACGTGCTGTACGATTCGCTAA 8722 36 100.0 30 .................................... TAAAAAGACCTCCAGTAGATGTTTATTGAG 8656 36 100.0 30 .................................... AAACGGCGAAAAGGGCCAGCATTTACAGAT 8590 36 100.0 30 .................................... GGGCTTGGGTCTTCAGGCTAGACCACATCG 8524 36 100.0 30 .................................... TCAAATGTATTATCTAATTGACATGGATAT 8458 36 100.0 30 .................................... TAAGATATACGCAAGCAGAAAGAGCAATCA 8392 36 100.0 30 .................................... TATAGCTGCCCTGCATGTTCAAAGGTTTCT 8326 36 100.0 30 .................................... TCAAAGTCTTGACGGACAAATTGATACACT 8260 36 100.0 30 .................................... ATAGACGTTATTATGCGTTTGTTATGGATA 8194 36 100.0 30 .................................... ACATTGAGAAACGAGCCAATGATGTTGGAA 8128 36 86.1 0 ............................T..A.TTA | G [8098] ========== ====== ====== ====== ==================================== =========================================================== ================== 15 36 96.9 32 GTTTTAGTACTCTGTAATTTTAGGTATAACTGAGAC # Left flank : AACCAAGCAAAAGGTGATATGCAGCAAGGTCAATCAGTAAATCAAAGTGCGAATGACGGAACTGCACAGCAAAATGCTAAACAACAACAAGGTGAGCAGAAAGTTAACTCTTTACCAGATACAGGTAAAGAAACTTCAGGAATGACGATCACTGCAATTGCTCTATTAATGACAGGTTTAAGCTTAATTAGTTTCAGAAAACGTAAAGATGAATAAGGTGAATTGAGTTTGGTTCGTTTCTAATGTGTGGACTCCTCCTTATTACTTGAACATAGTTTGAGTGGTAGGGGAGTTTTTGTGTGGAGGGAGGAACGTTTGGAGGTGGGGGAATGACTTTGTGGCCGAATATGCTGGGAGCAGAGTAGCACATATTGGCATGAGAGACTTTGCGGTAGATTAACGGGTGAGATAGGTCGAGAAAAGGAGAGGAAATTAACACTAAGTGGAGCTCGCTATTTTAGTTTATTACTAAGAGCAGTTCTTATATAATAAAGCTAGAG # Right flank : GCAACGCCCACCCATATAACATTGAGTGAGCGTTTTTAATTTATTTAGTTTTCTTCATTATGTGCATCATCATCTGAGCTATCATCCTCTTCTTGAACGGACTGATCGCTTTCGTTATCCTTATCTACCGACTTATCATTTTGCTCATTAGAGTCCTCATGATTCTTATCTGAATGATTTGAGGGCTTCTCCTTATTCATTTTACTATCTTCTTTTTCATCATCTTCTTCCTGTGAATCTGATTGTTCAGACGTAGAGTCGTTATCATCATTATCATTTTTGTCACTTTGTGAATCTTGATTTTCGGAACTACCTTCTTCTCTCGCATCCTCATCAGGCTCTGCTTCTCTTTGTGCTGCAGTCATATACTGTTCCTGATATTCCCCGATAGGTTTCATGACCTTACTGTATTCTTCCTCGGTTACTTTGGTCTGACTATGAGTAAATTTGTCATATTCCCCCTGTGATACAAAGGTATTGTAAAAATCAACAGCAGCGTT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAACTGAGAC # Alternate repeat : GTTTTAGTACTCTGTAATTTTAGGTATGACTGA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.73%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //