Array 1 27-521 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPSK01000203.1 Weizmannia coagulans strain GBI-30, 6086 contig203, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 27 32 100.0 34 ................................ GGGTCGCTACAGCTAAAAGTAAGTGTGCATTTCG 93 32 100.0 35 ................................ TTGGATATCGTATTTTGCGATGTATGCGGCCACCG 160 32 100.0 33 ................................ GCCTTTGCTTGCAGGTCCTGGACAATTTCCGGC 225 32 100.0 33 ................................ TGATCAATGGTGCTCACTCTATAAAATCACTCG 290 32 100.0 35 ................................ ACGTTGCAGCCAGTCGCCGATTGCGGTCCCCTGCG 357 32 100.0 35 ................................ ATCAAGCCACTCAGGCGGGTTCACATGCGCGGCAC 424 32 100.0 34 ................................ TTTCTTTGCCATTTTTTCATTCCTCCTTGTTGTT 490 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 8 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : TGGTGCTCACTCTATAAAATCACTCGG # Right flank : GCCACTACCACCACATTCCGGGTCAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [25.0-20.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 58095-59581 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPSK01000095.1 Weizmannia coagulans strain GBI-30, 6086 contig95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 58095 32 100.0 34 ................................ CGCCGACAAATACAAATGAATTTCACTCGTCAAC 58161 32 100.0 33 ................................ ATCAAGCGGAAAGCACGTTGGCAAATGGGCGGT 58226 32 100.0 33 ................................ TGGAACAGTTAACGTCAGACAATTTACAGGGCT 58291 32 100.0 34 ................................ CCAAACGATCAGGGATAAAGTATGGGATGAGTGG 58357 32 100.0 36 ................................ ATCTAATTCAACTAATGAACCGTCATCGTATCTGCT 58425 32 100.0 34 ................................ TTCCCGCTGCTGGTTGATCAGCTTTTTCTGTTCT 58491 32 100.0 35 ................................ AGACGACAAATACGACTTACTTTGGTACAAGTTAT 58558 32 100.0 35 ................................ TACATCTGGCACATACACGTTAAAGCTGGACGAGC 58625 32 100.0 34 ................................ CGGGTCAAAATCCAAAAGGTTTAAAGCATCGCTA 58691 32 100.0 36 ................................ TTCTAGCGTTATAACCGGGCGGTCTGGCATTTTGCC 58759 32 100.0 33 ................................ CGCGCTATGCTACTGGAATAGGGACATTGCCAC 58824 32 100.0 35 ................................ CTAAACCGTGACAAGCAAAATCCGAAACACGACAA 58891 32 100.0 34 ................................ CCAAGCTCGATATAATAATCAGCAAAAGCCTGCT 58957 32 100.0 34 ................................ GTAGACAATGCGTTGTAATTCCGAGTCAAAAAGT 59023 32 100.0 34 ................................ GAACTTAACGACGGAATCGAACTCGACAGCGACG 59089 32 100.0 33 ................................ GCACCATGCTCATCGGGCAAAGGAAAACATCCT 59154 32 100.0 34 ................................ GTTGCAGAACAAGGCTTTGATGGCATCGATTATA 59220 32 100.0 34 ................................ CCGTCATCAATTTTGCACCGGATTGTGCATCCTG 59286 32 100.0 34 ................................ AGGCAGATCACCCGGATCTTTTGGACCGGGAAAT 59352 32 100.0 33 ................................ AGTTAAAAATTGTCGGTTTTTGCCGTCCGTATC 59417 32 100.0 34 ................................ TATGCGCAGCTGGCCTGTCTCTACCGCCTGCATT 59483 32 100.0 35 ................................ ATCAAGCCACTCAGGCGGGTTCACATGCGCGGCAC 59550 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 23 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : AGATGAGTATCCTCCTTTTCTGTGGAAGTAGGTGGAAAATTTTGCTTGTTGTCATTACTTATGATGTGAGTACTTTGACCGGAGCAGGGCAGAAGAGGTTAAGAAAAGTAGCGAAAGTTTGTCAAAACTATGGCCAGCGTGTCCAGAATTCCGTTTTTGAGTGTTTCGTTGATGCAACACAATTTGCCTCTTTGAAGATTGAACTGTCTAATATTATTGACCCAGATGAAGATAGCCTGAGATTTTATCAGTTGGGAAACAACTATAAAAATAAAGTAATGCATATCGGGGCAAAACCATCTTTGGATTTAGAAGACCCCTTGATCTTTTAGTGCGAAGGTGTAGTGCACACGATTTTCCCGTGTGTTCGCACCAATATGCTAACCAATATTTTACATATATTGGTTAAATGTGGAAAAATAGTCCTTTGTTTATCAGAGGAAATGGCGAAATTTGGTTGTTTTAAAAACGTACATTCGCCTTTTTGACCAAATTCCGCT # Right flank : GCCACTACCACCACATTCCGGGTCAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 27-654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPSK01000096.1 Weizmannia coagulans strain GBI-30, 6086 contig96, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 27 32 100.0 36 ................................ GCCAGTACATCGGTCACGTCGGTTATGACGTCTATC 95 32 100.0 34 ................................ AAGACGCCTACCAGTTAATTGCGGTCGATACGGA 161 32 100.0 33 ................................ CTGTTTGAATGCACGGGACTGACTGAATACTGG 226 32 100.0 33 ................................ CGGTGCATCCTTGAGTGCTTCAATATGGTGCAC 291 32 100.0 34 ................................ TGCCGGAGGACCTGGATACAGCTATCCAGCATTA 357 32 100.0 34 ................................ TGCAATGGCAGGGAGCCTTAATCTTTCCCACTTT 423 32 100.0 34 ................................ CATTCCTCCATGCTCCACCCCGTCCACGCTTGTA 489 32 100.0 35 ................................ CTTTAAATACGCGGAAACATCCCCATAGTTTGCAG 556 32 100.0 35 ................................ CTCCTCCAATATGTATAGATCGTCAACCTTCACCC 623 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 10 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : TGGTGCTCACTCTATAAAATCACTCGG # Right flank : TCGTTTGCTGTATTTGCGATCCCTAGGATCATCAAGTCGCTCCCTAATGAATACTTGCTGAGCAAACCAGACAAAGCCTTGTATCTGGTTCGCTCAGCCGCAAATCTGGTTGATGCCGCCTTCTTTGTTCCTTCCATCAACCTTAGACCCGAAAAGTGGCGCTGAACGCGCAGATACCAGTGACAAACCCTTTTTGTAAAGTAACTCTTGTTTTTATAGTTCCTGGAACCGGGACCAGGGCTTTCCTTATTCAGCAGCCCCCGATTATGTATTTCTGTCATCCTCGTCGTCCAGTTCCCTGATCAAATTCCAAGTCTGATAAATCCGGTTTGCCATTTTCTCAGGATCTTTCAGCATCATTTGGTATAAATCCGGCTCATGGCTCAACGTTTCAAGCAGTTTCTTTTCCGGATTACTGACCGCTTCATTTGTCTTCAGGCCGGCATGGTTGGTAAGGCCCAAAAGATAATCAATTGAAACTTTCAACACTTGCGAAATTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //