Array 1 79-1266 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUFO010000026.1 Escherichia coli strain HUM-195 NODE_26_length_60493_cov_57.387877, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 79 29 100.0 32 ............................. CGGTGATGCGCGGTATCGATCAGCATCCGGCT 140 29 100.0 32 ............................. GCTCATTTCAAATGGTCAGGTCCGGTGGTTTT 201 29 96.6 32 ............................C TGATCACATCATGTTTATTCGCGGTCGTATTG 262 29 100.0 32 ............................. TACTGGAAAAAGCTGGCGACGGTGAGCGCAGC 323 29 100.0 32 ............................. GGCACGGAATTGTTATGCTGTTCCCCTGACCG 384 29 100.0 32 ............................. ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG 445 29 100.0 32 ............................. GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA 506 29 100.0 32 ............................. GGACAATGTGAAAAGCTTAATATTCATTACAT 567 29 100.0 32 ............................. TACAGTTTCCATAAATTCACCTCGTTTATATA 628 29 100.0 32 ............................. ATCGGACGATGGCGATCGCAATCGCGCGGGAA 689 29 100.0 32 ............................. AGGACGAAACGACCGGAAAACTGGCGACGGGC 750 29 100.0 32 ............................. CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT 811 29 100.0 32 ............................. AACCTTGTCGGGTCGCCCGTGCGTCATGATGA 872 29 100.0 32 ............................. AGTTCCCACAAACCTGGGTGCATCTCGCGTTC 933 29 100.0 32 ............................. ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA 994 29 100.0 32 ............................. CCAGCCGAAACAACGCCAGCAAAATCGACCGC 1055 29 100.0 32 ............................. GGATATAGAGCGGGTACTCGAGCGAAGCGGGG 1116 29 100.0 32 ............................. CCAGGACAGGCCGTGACGGTTGCCATTGAGTC 1177 29 100.0 32 ............................. TTTTTGTTCTCTTCAAAACGCCGAACAACCAA 1238 29 93.1 0 ............T.....A.......... | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.5 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGGG # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //