Array 1 13248-13642 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMQ010000304.1 Streptomyces rubrogriseus strain SID7739 contig-44000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13248 29 100.0 32 ............................. CACCAGTGAGATTCGGTGGGCGGGGTGTCGCG 13309 29 100.0 32 ............................. TCGCCCCGACCCTGGCGAGTCTGGGCAAGGCC 13370 29 100.0 32 ............................. GCGAGCTGATCGACCGCCCACAGGTCCGGGAC 13431 29 100.0 32 ............................. GCCGAGCCGTTCGACCCGCTGAAGTTCCCGAA 13492 29 100.0 32 ............................. AGGTCTGCGACGCCCGCGTATTGGGCGCCGGT 13553 29 89.7 32 .........T....T..........C... ACCGCGGCGAAGGCCTTCGGCGCGCCACAGCT 13614 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGACGCCCCGCCCGCTTCGCCGCCGACGACATCGACGCCCTGCGGATCGTCGCCACGCTGGCCGAGCACCACGGCGGACGGCTCGCGGCCACCCTGCCGCCCGGTCTCACTGGCCCCGCGCCCCGCCGGACCCCGGGACCGCAGAGGGCCGCTCCCGCTCCCAGATCCGTTGCTCCGTCGACGTCGGCGGTCCGGTCCGCGGCGACTGCACGCCCGGCGCCTGTAGTCAGGGGCCTGCAGTGAGCACGGGCGGGACGGGGTCAATCACGGCGACGTCGTCCCTGCTCCGAGCGATCTGGCGTGGCGGGTTGTCAGGGTCAGGCAGGGAGCAAGGACGACCGCGTGCCGCCATGCCCAATCCCCGCTGACGTCCAGCCTTCCTGCGATTCACGTCTCCGTCACGCCGGCAGATGCGCACTGATCGATGTCCATTTTGCCGGATTCTGCAAAGCTTGCTGAAAACGCGTCTCCGCGCCCATAGAATCCCAGGTCAAACAGC # Right flank : CGTCAGCGGGCTGTCGAGACGCGTGCTGCCGCATGGTCTAACTGTCGGAAGACGAAGAGACCCAGCCCGCGTAGGCCATCGCTGTGCCACCGCCCGCGAAGAGCCGCTCTCGATGACCGAGGCCGCCACATCATGTACGGATGGGCGCAGTTCGAGGAGCCCGGTGCAACAGAGCTGGGAGGCCGCGGGCCCGGGGGCGGGGGCCGCCAACCGGTGGCCGTCATTTGCGTCACTGTTCGAGCGCGAGACGGTGCGACTCAGCTCTCGGGAGCAGGGCCCTCGGCCAGCCGTGGGGCGCACCCTGGAAACACGCCGCGATCAGCGCACGGCGCGGATCATCACGGTCAGGACCGGCGACGCCGGTGACGGCTGGCTCTGGCCGATGTCCTCGTACCCCCACGACCGGTAGAGCGCGTGGACCTTGCCGTCGCCCGCAGCCGGATTGACCATCAAGGTGACAAAGGGCTCGTCGCGGGTGGCGAGGAGGGCGTCGTGAATAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 25233-25814 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMQ010000304.1 Streptomyces rubrogriseus strain SID7739 contig-44000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 25233 29 100.0 32 ............................. AGGGCGCGTTGAGTGTCGGGCGAGAACCGGCT 25294 29 100.0 33 ............................. ACCACGGTCGTCGTGAAGGACGGTGACGGGTCG 25356 29 100.0 32 ............................. CGGGCCTGGGTGCTGACCCTGTCGTCGTCCGG 25417 29 100.0 32 ............................. TTCTTCAAGTCCGGCTGGTCCAACATCAAGAA 25478 29 100.0 32 ............................. AACTCACCTCTTAAGAGGTGAGTTTCGTGGTG 25539 29 100.0 32 ............................. GCCGGCCTCCCGCACCACGAGGACGTCGTGCA 25600 29 100.0 32 ............................. GACACCAGCGGCTACCTCGCCCCGCCCGCCAA 25661 29 100.0 32 ............................. CGGGCCGGCGGCTCAGTCACCGTGGCGACGGT 25722 29 96.6 34 ............................T GAGGTCAAAGCTGTGGCCCCGGGCAACGGCACCG 25785 29 75.9 0 ...T..........T.......C..CTGT | C [25807] ========== ====== ====== ====== ============================= ================================== ================== 10 29 97.2 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TGCCGGCAGAGACATCACGAGTGACCACTGCACCGGCACCGATGGTCACCCCTTGTGTGATCACGGCAGCCGTCCCGATCCAGACGTCGTCCTTGATGACGATCGGAGCGGAGGAGAGGTACTCGCGGCGCTCGGCCAGGGGCAGTGGATGGCCTCCGGTGATGAGGCTGACCTTCGGGGCGATCGTGACGCCGTTGCCGATACGGATGCCTTCCTTGTCCATGAAGGTGTATCCCTGGTTGACGAAGACGTTCTCCCCGAACGCCGTGTTCAGCCCGCACTATGCGTGGCTGGGAAGGCAAAGCTGGCCCTGACGCCTGAGCAGTCCCAGCTCGTGTGCATCCAGGCCTGAGTGAGGAGGGTTCTGGCCGGCCAGCACGGACGATCGGCCCGCTCTGAAGTGCCCTATGGATGGGCACCGCGCCATGTCTCATTTGCCGGAATCTGCCAAGCTTGCTGAAAACGCGTCCCTGCGGCCGTAAACTCGCAGGTCAATCAAT # Right flank : TTCCGAATCGGCTCGTTTCAAGGCTGATGGCTCGAAGCAGGGGCCTCTTGAAGATCACTGACCTGACACCCGACCCCGTAGGTATTCATGGCGGTATACTCATCGGCGTGGATACGACGATCAAGATCGGTGCGGAGACTCGCGACAAGCTCGCCGCTCTGGCCGAGGCTAGGAACATGTCGATGCGGGCCTTGATCGAGGAGTTCGCCGCGACCGCGCTCACTCCTGCGCAGTTGCGTGAGCGCGCTGAACGCACAGACGCGTTCTTGGCCGCAGAGTTCGGGCACCGGGTCAGCGACGACGAAGCCGGCGCATTGCGTGAGCGGATGCGGCAGGCGCAGAACGCTGGTCAGACTCGCGCTCGGGGCACGGCGGCGTGATCGTCGAGCACTACGTCCTGGACAGTCGCACACTCCTTGCCCTGGGGGGCAACAAGCAGGTCTCCGGGCTCATCCACATTGCCGCGGGGGACCCCACGGTGCGCTTGTGGGTTCCCATCG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 17502-17958 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMQ010000348.1 Streptomyces rubrogriseus strain SID7739 contig-3000010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17502 29 100.0 32 ............................. TGCACGGTTGCGACCAGCGCACCGGCCTCCTT 17563 29 100.0 32 ............................. CCCGGCCGGTTCATCAAAGAGGGTCGCGACGC 17624 29 96.6 32 .....T....................... GCCGGCGTGGGCCATACCGCAGGCACCCTCGG 17685 29 100.0 33 ............................. GGTCCGGCGAGGCAGGCCCCGGTCAGCCACGCC 17747 29 100.0 32 ............................. GTGAAAGAGGTGTGCTCGAAGGGTGAGCCATG 17808 29 93.1 32 .............CG.............. AGCTCGTACTCGGTCTCCAGGGTGCCGACCCG 17869 29 89.7 32 ..A........G.A............... ATCACCGGCCCCAGCCACAAGAAGCGGCCGGC 17930 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.0 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : ACTGGGCTCGGTGGTGGGGGCCTTGGCCTGTCGGCGAGTGTTGCGGTCTCGGCCCGGCGTGTCGCACACGACGCGCGCGTGCCGGTCGGCAGGGGACGCGGTGGCTGATCGTTCTTGGGGTGGTGGAGGTGTGGGGGAGGGGGCAGAGGCGGGACTGGGGATCCGAGGTGGGGAGCGTCGCAGGCCTGACCTCCGAGCGAAGTTCGCTGCCGAGTACGGCGTCGCTGGCGCCCGGGTGGTGCGGCCCGGGCTCGGAGCCAGGCTCGTCACGGGGGTGCCGGCTCCAGGACTTCGGTGCGTTGGCCCTGCCTGGCTTACCGGGTGGTCGGCCGAAGTACGGGAGTCGTTCGGCCGGCGCTGCTTCTCTCGTGCGAGCAGATCGAGGTGGCGGTTGGCCTCCACACGTGGAAGCCGCAGGTTGGCGTGTGTACTGTTTGCCGGAATCTGTGAAAGTCGCCGAAACCGTGTCTCAGCGGCTGTAAAGATGCAGGTCAAAGAGT # Right flank : CTGAGCCAGGCAGAAGACCGAGGCCGATCGTGGCTGCTCCCCGAACCCGCGATCATGCCTGCGGCCGCGGCCTGTTTGCTATGGGCGCAGTTCGGCCGAGCCGGAGCACCGCAAGGAAGCGCCCCCGATCGAGGGGCTTCCACCGACGGCACGTGCCTGAGCCTCTCCTGGAAGCATGATCAAAATTAGAGTGAGGACAAAGGGGGTTCCCCTCGGGAAACCCGGGCAAGCCGGGAAGACGCAAACGCACAAGGGGCGAGGAGCGGGGAGGGGCGGATGTGGCCTGGCTGACGAGGATCGTCGCTGACGAGCAGGTCGAGTACCGGCTCAAGCAACAGGCCGGGTGCGCAGTCGGGGAGGCCGGGGAGGGCGAGACGGTCATCCTGGACGCCGTCGAGAGCCGGGCCGTCGACTACCGACTGCGGCCGGAGGGCGGGGCGGCTCTGGTCTGGATGGGCAGCGGTCTGGAAGCTTTGGGACTGGTCGAGGGCGCCGCCCTG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 22860-22465 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMQ010000348.1 Streptomyces rubrogriseus strain SID7739 contig-3000010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22859 29 72.4 32 A...GGA.T..G..T......G....... ACCAACACCAGTCCGGCGGTGCGGTACGACGA 22798 29 93.1 32 ..A..............A........... TCCGCAGGGACCCGAATCCCTCGGCGTACGAA 22737 29 100.0 32 ............................. CTGTACGTGGAGAAGTTCGCCACGGACACGTT 22676 29 96.6 32 ............................T GCCTGCTGGTCGAGGACTTCGAAGCTGTCGAG 22615 29 89.7 32 ...T.......G..T.............. AGCGACGTCGACAAGGACTGGGCCGACGAACT 22554 29 96.6 32 ..............T.............. TTGTTCGCGTCGGCGATCTGCTTCGCGAGCAC 22493 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 92.6 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GCCGCGCAGCCGCGTTGAGCGCGGTCGCCTGCTATTTCACCCGCTTGCCGGCCCGCCCCCAGCCGGGCGCCGACCCCACCCGCACCGATCCGTTCACCCGCAGCATCCAGCACCTCGCGCTGACCGCGACCCCCTCCGCTTCGGCAGACAGGAGAACGGCTGCCCAATTCCTCTCACAGGCGCTGAACAGCTCCGGCTGGTACCACGGCCTGCCGGTACTGGCTCAGGTCGAACCAATGGCGATATCTCCCGTCCGGGACATCTTGCTCGTACATACCCGCGCCGCCCTGGAGCGCTGACCTTCGAGGTGACGACGGAATATGCACGCCTATGACAGGCCGATGAGATCGGGCTCACTCGGATGTGAGTAGTCTCGACACAGATCTGATCGGCACGCTGCGCCACGTCGGGCGACCCATTCCGGACGCCCCGCTCAACGCGACGTGGCCCGTGGACGAGCACCTGGCCGCGCATCTCGGATGCGGATGCCGGGCTGGTCG # Right flank : AGTGTCGTACTCCTCCGCTCCGTGGGGCTCCGGCCAATGCCACCAGCGACCACCGGCACCAACTTGGGGCCCCGGACAGCACCATGGAGTCACTTCCTGCTCTGTCCCCTGGACTGCGTCGGCTGCGGATGTGCGACAGTGGCCTGCTGGTGCTGCGCGGTTCGCTTCGCCCGTTCCTGCTGGACGGTGCGGCGCTCCGCCGTCTCTCGGTCGTGCAGCTCGGGGAATTTCTCGGCAATCGTGGCGCGCAGGGCCTTCTCGGCTCGGGCTTTGGCGGCCTGGGCGCGGTGGCTGGCGGCGAGCTTCCGGAACTCTCCGGCCTGACAGGTCGCGCGGCTGACGTCGTCGCGGTCGCGTTTGTCCATGCCGTGCCCGTGCCGGGCGGCGGTGGAGCGCATCTCCAGGAAGCGCTCGGCGGCCTGGTCCGCGCGGTCGGGCACCGGCTGGCCTGCTGCACCGAGGGGTTGGGCGATCCGGTGGTCCCGGACAGTCTCCCATGC # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 32805-33619 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMQ010000348.1 Streptomyces rubrogriseus strain SID7739 contig-3000010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 32805 29 89.7 23 .....T..................AC... GGCCGTGTTTACTGCGCCGGGTG G,T [32807,32810] Deletion [32857] 32859 29 93.1 29 .A......G.................... GTCGACTACGAAAAGGCCGCCGCTCTCGA 32917 29 93.1 31 .............T..T............ GCAACCACGTGGGACAGTGGGGCGGCGTGAA T [32944] 32978 28 86.2 33 ..........T.T.T..........-... TAACCCGGACTGTGGTCAGGCGCTCGACAGGCT 33039 29 93.1 32 ...T.............A........... GAGCTGGCGAGGCGGGAGAAGCCCGAGGAGCT 33100 29 82.8 33 ........T...G.....A.......T.A CACTAGGGACCTCAAGGAGAAGCGGACCGAGGT 33162 29 93.1 32 T...............T............ ACGCGCTACGTGATGCAGCTCCGCGACGCCGT C [33173] 33224 29 93.1 32 ...T...T..................... AGCAGGTCGCCCGGTTTGAGGTTGGTGCGGGA 33285 29 100.0 32 ............................. GAGACCTGCGCCGCGGCCGCGTCGATGTCCGC 33346 29 100.0 32 ............................. CACCCCGCGCACTACCTGCGCGAAGACCCGGC 33407 29 100.0 32 ............................. AACGGCTCCGCCCGCGCCCGCTACGGAGCCGC 33468 29 93.1 32 ..............T.T............ TTCTACGGCCAGTACCAGGACGGTATCTCTGG 33529 29 96.6 32 .........................C... GAGCAGGTCAAGAGCGCTTTCTCGGACCTGTC 33590 29 82.8 0 T............TG.........C..T. | A [33612] ========== ====== ====== ====== ============================= ================================= ================== 14 29 92.6 31 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TTCGACGGTCCGCAGCTCGTCGGCGTCGTGCAGGATCTCGACGAGGTTCCGCGCGACGAGCCGGCCGTCGAGCGTCAGAACCCGGACACATGCCTCCTCCCGGGGATCCCATCGGGGGCGTGTCGCCCCGGCGAGTGGTCCGCGTACGTCAGCCAAGGTGCATCGACCGCCTCTTTGCCCTTAACGGTTGCGTGCTGTGACGGGGCATGACGCTAGCAAGCGGGCGGTGACCGTGTGAGGGTTTATGGGACATCAACTCACCTTTCCTGAAAGTGAGTTACAAGGCTCCGCTCGTCGTCCCTGCGTCCTTCGCCGCACTTCAGGCCGGCTTCTTCCGGGGGCTGTCCCTCACCTCCCGCGTAGAGGCCCAGGTAGATCACGACAGACCGGAAGCCCGCCGCGATGTCGACAGGACCCCGCAGCACCTCCCACAGCCGCCGCGTCCCGGCCGTCCACTCCTTCGGTGTGACACTGGTCGTGATCGGCGTCCGGCAACGGCC # Right flank : CACAACGACCCCGTCCGTGCGGCATGGCCGCCCGGCGGCGGCTCTCCGCGGAGGATCACGCGCCGCCCACCCGCGCCTCCGAAGTCGCAGACCCGATCGCGGACGAAGGAAGAGGCACCGCAAGTTCGTACAGCCGCCCCCGGATGTGGTGGACGAGCGGGGAGTCGGCGCCGTGGATGTCGGTGGCGACGGTCAGCAGGGCGGCGCCCAGGCGTTGGCGGTCCGGCCCCGGCGGCACGGCTCGCCACAGGCTGTAGGCGCGGCGGGTGGCCGCCTCGACGTCGGGGTGTCCCGGGCCCTGGATGGTGACACGCAGCTGCGCGGCGTGCAGGTACCAGGACAGGCCGGAGGGATGGTCTCCGGCGAGGGCGGCGAGGTAGCCGCGTACTTCGCGGACCTGGATCGTGTGCAGGTGCAGTTCGCCGTACTCGGCGGTGGCGTCCCGGTCGATCCGGGCGGCGAGAGCGGCGGCGTCCGGTAGGCGTCCTGCCTGGGCGATC # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //