Array 1 124-335 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCFH01000110.1 Lactobacillus helveticus strain IMAU80627 Scaffold110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 124 29 100.0 32 ............................. TGGACTTCAAATTATTATCAATCAGACTCTGG 185 29 100.0 32 ............................. AACTCCGGAGCCAGAACTTCTAACCCAACTAC 246 29 100.0 32 ............................. TGCTCTAAATTATCGTGATATTCTTGAACATC 307 29 93.1 0 ...........T...............T. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : AACAGCTTAACCAAAAGTGTTCAATTTATTATTGCAATTTGCGAATAAAATAAATAGGATGAAACTGAATAAATTTTAGTTTTCATAAAATTGAAATGGCTCAATGATAAGGGATCTTTTAGTG # Right flank : TCAGGTGTATAAGGCATTTAAGTATCTATAGTCTAATTATTTTAGAGCATAAAAAAAGACCCGCCAAAAAATAGCGAGTCCGTGTAAGGAGAATAAGAATGAAGGAGAGGTAAATCAGCCCTCGTTTCTTAGTTTATATTAGGAGTGTTAAAATGGCAAGAACTGAACCAGAAAAAAAAGCTCAAAAAAAATATTATTTGAAAAACAAAAATATGTACAAGATTAACTCCTATCGCTCAAGAGCTAAGAATTTCATTTTAAAGTATGCAACCACTGATGAGCTCATATGGCTTAGAGGCTTGATTGATGAAAGATTATCTAAAAAAAAAAAATTTGAAGTAGCAATAACTGATTGAGTTTGTTGGTATTCTCCACGTATGTGGAGGTGATCCTTAAGAGGGCGTCAGGTCAGTTTATACGGTCAAGTATTCTCCACGTATGTGGAGCAACCAAAAACAGGACTAACTCAACCAGATTAGTCCTGTTTTTCATCTATATTA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //