Array 1 1054920-1056595 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABDWI010000002.1 Klebsiella variicola strain NCTC9169, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1054920 29 96.6 32 A............................ GCGACTGGCGATTTCCTTTCTGTCCTCTTCCC 1054981 29 96.6 32 A............................ GGTGTTAACGATGAGGTCAGAGCGGACAGAGC 1055042 29 96.6 32 A............................ TTTGCAGGGGATACAGTTATCGTAATCGACAA 1055103 29 96.6 32 A............................ CATACCCACACTGGACACCTTCGGCTCCCGGC 1055164 29 96.6 32 A............................ AGCCATATTTCCCAAATATCGGGCTGCACCAA 1055225 29 96.6 32 A............................ CTGGCTGCGGTGTATGCCTGTATTTACGTTAT 1055286 29 96.6 32 A............................ GCCGAAAATAATAAAGTTCTCCGGGAGTCGAC 1055347 29 96.6 32 A............................ CACAGGCTTCCCATACCAGACCGTGTAATTTA 1055408 29 96.6 32 A............................ CCTGGATCCGCTGGCAGGGGATTGCTAGTCCG 1055469 29 96.6 32 A............................ ATTCAGGTATGGGGCAATGGTGCGACGTTTGA 1055530 29 96.6 32 A............................ GTCACTGTACAACGGGATCAGCATGATCTCAC 1055591 29 96.6 32 A............................ AGATACCCGAGCGGCGCCGGGAACTGGTGGCA 1055652 29 100.0 32 ............................. AAAGTAGAGCGTTAAATAACACACTGTAATCA 1055713 29 100.0 32 ............................. CGCCCTGACTAAAGCGCAGTCGGCTGTTAGCG 1055774 29 100.0 32 ............................. GCGATGAAATAGTTACCAACTTCAACTATGGT 1055835 29 100.0 32 ............................. TCGTTATTCGTCATTTTGGTTCCATGGCCAAT 1055896 29 100.0 32 ............................. CGTTAATCGAGGTGGTAAACCGCTGCGCCGCC 1055957 29 100.0 32 ............................. TGGTGGGAATGCTCCAGCAAGAGGCTTTATCC 1056018 29 100.0 32 ............................. CAGTCGAGCTGCGGATATACGCGCCCGCCCTT 1056079 29 100.0 32 ............................. TTCAATGCGGCGATAACTTCCTTTAAATCCAC 1056140 29 100.0 32 ............................. ATGATCTGCCACCGAAAGATTTCGCATGCGAA 1056201 29 100.0 32 ............................. TATTTGACGTAATCGGAAACGCTAATTTTGAA 1056262 29 100.0 32 ............................. TTCGCGCTGGTTTTCTCATCTGCGGCACACAA 1056323 29 96.6 32 ................T............ TAAATGGCAATTGTTAATATTAACGTGTCGGT 1056384 29 100.0 32 ............................. AGCCAGTCCGCATCTCGCCAAAAACCGTTAAC 1056445 29 100.0 32 ............................. ACTACGAGCTAACCGGTGAGGATGAGTTCTGG 1056506 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 1056567 28 82.8 0 ...........TT..-.........G..C | A [1056578] ========== ====== ====== ====== ============================= ================================ ================== 28 29 97.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGATGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : CGCAACTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAGGTATTGATAAACGCCTGGGCGGTGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGACCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAATTCCTCGCTGATAATGTCATCACTAGACTGCTGG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //