Array 1 588062-587493 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012398.1 Chelatococcus sp. CO-6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 588061 33 100.0 34 ................................. GCGAGATCGTCGCGATTCGCCCCTTCGTGGAGCC 587994 33 100.0 35 ................................. CTGATCCGCTCGGCCCGCCCGGCGGCGATCGCCGC 587926 33 100.0 33 ................................. CTGCATCCGGCCGACGATGCGGTGCGCGTCAAT 587860 33 100.0 34 ................................. GATGAAGATCACCCGGTAATCGCCAACCCGCAAG 587793 32 97.0 34 ..............-.................. ACCATCAGCTCCGCGACGCCCTGTCGGGCCGCGT 587727 33 100.0 35 ................................. GTGCGCGGGCGGATGGACGTGGCCACCGGCGCGGC 587659 33 100.0 35 ................................. CAGTACTTCGCCGCCATGAGCGAGCAGTGCCGGGA 587591 32 93.9 35 .................A.-............. GCCATGTCCTCACGGATGGCGTCGATCACGTCAGC 587524 32 87.9 0 .................A.T-...C........ | ========== ====== ====== ====== ================================= =================================== ================== 9 33 97.6 34 GTCGCTCCCCGTACGGGGGGCGCGGGTTGAAAC # Left flank : ACCTATGACGTGAACACGTCGGATCAAGGCGGGGCAGGGCGGCTTCGGCGCGTGGCGCGCGCCTGCCGCGATTTCGGCCAGCGGGTGCAATATTCCGTCTTCGAGATCAACGTCGATCCGGCGCAGTGGACGCTGCTGAAAGCGCGCCTCGAAAAACTCATCGCGCCCGAGCGCGACAGCCTGCGCTATTATTACCTCGGCGCCAACTGGCAGCGACGCGTCGAACACGTCGGGGCCAAGCCGGCGACAGACCTCGAAGGCCCCCTGATCGTCTAGCCGGGAGCCGGTTTCTGCCGCGAGGCGCAGCCGCCGCGCAGGCAGGGTGCGAACCGCAAGCGTGCCGGCGATCCCCGTCCGGTTCGCACATTGGACAATTCTTTGACATTGTTGATCTCTTTCTGCCTGCGGCGCGGGCGTGCCGGCCGCCCCGCCGGCGGCGGGCCGCGTTTCGTGGTCTGCGCCCGTTTTGCTCGTTGTCGCAATCAGATAAGAACGATGGG # Right flank : ATGTAAGGCATGTACCAGTCTTACTGCTCGCCGCTGTGCCGCCCCGCGGGGGGCGATCGTGGCCGGACGCCCTGGCGCGCTTCGGAGCGGACATTATGGAAGTGCGCGTCAAGGCCCTTCCCGGCGAGGCGTCCGGTGGCGGCGGGGCGGGGGATCTCTCGGCTGTGCGTCTCAAGCAGAGCCGCTGCTCAGGACGATATGTGAAAAATTTTAACTAAAACTGTGCTGGATCGAAGACGTTTCGAAGCGATTTCTTTAGATTTTAATTGATTCGTTACCCGGGATGAGTAGAGTGCCCCTGCTTTTTCACTGGGGGGTACTGATGCGTGCATTTCGCACTTCGATTTCCATTCTGGCTCTCGCCGTCGCCGGCCCGGTCCTTGCGGCCGACCTGCCGTCGCGGCAGATGGCCCCGATCGTGCCCGTCGGGCCGATCTTCACCTGGACCGGCTTCTATGCCGGTGTGAACGCCGGCGGCGCGTGGGAGCATGGCTCTCTTC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTACGGGGGGCGCGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 3125776-3127232 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012398.1 Chelatococcus sp. CO-6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 3125776 33 100.0 37 ................................. ATGGAGTGGACGGGCGAGAACGCCACGCGTCGCGCAG 3125846 33 100.0 36 ................................. ATCCGGCAGATCGTCGAAGCCACCAGCAAGCACCGC 3125915 33 100.0 34 ................................. AGGCTGACGTTATTGCGGCCGTCGAGGAACTGCA 3125982 33 100.0 35 ................................. TCGGCACTGGCCCCGATGATCAGGCCGACCGCGAG 3126050 33 100.0 38 ................................. CCCACGTCCTCTGCACCGGGCCTGTTCGCGGAGAGCGG 3126121 32 97.0 36 ...................-............. GCCTACACGACGCCTGAGGGTGTCGAGGGTGTGATG 3126189 33 100.0 35 ................................. GACAGCCAATCTTACTGTGCCCACGCGCATCGGGG 3126257 33 100.0 34 ................................. TCAAGCAGGGCACCCTCGTCGGCGGCTTCCTGAG 3126324 33 100.0 34 ................................. AGGATGAAGTCACGGAAGCCTCGCTTGAGGTCGT 3126391 33 100.0 35 ................................. TGGCCCGACGGGCTGAACCCCGACGAGCACATGAG 3126459 33 100.0 33 ................................. TATTATCCCCGCATAAATTCATGATCCGGTCGC 3126525 33 100.0 34 ................................. CTCGCCCGCTATCGCGAGATCCGATCCAGGTTCG 3126592 33 100.0 35 ................................. CTTCCCGACGAGGCCGAGGCGCCCGGCACCCCCTG 3126660 33 100.0 33 ................................. TGCAACGTCGCCTGCAACGTCATCGACGATCTG 3126726 33 100.0 34 ................................. CGCATCGAGGCGGCGAAGAAGGGTGCCGGATCAC 3126793 33 100.0 35 ................................. GCCAGCATCGTGGCGTTGAGGGCGGCCCACACCGG 3126861 33 100.0 38 ................................. GAATGCCTGCATGGCGTCCTGATTGAAGATCATGTTCA 3126932 33 100.0 35 ................................. GAATAGGGGCTGACACATGGCACTTGGCAGACGTG 3127000 33 100.0 35 ................................. CCTGTCGTGGCCGCAGCGGCGGTCGCTGGCGTCCG 3127068 32 97.0 34 ..............-.................. AGCGCCTCGAAGACGAGCATGTCCGGCTGTGCCG 3127134 32 93.9 34 ..............-..........A....... CTGATGGACGAATACGTGAAGGTCGACCGTGCCC 3127200 32 78.8 0 ...T..........-...A...C..A.C....T | T [3127211] ========== ====== ====== ====== ================================= ====================================== ================== 22 33 98.5 35 GTCGCTCCCCATGCGGGGGGCGTGGGTTGAAAC # Left flank : GAGAACGCAACGGACAGGACGGCAGGGCGCCGCTGCGGATCGTTTACAGGAGCACGGGGCGAGGACCGTGCCGAGCCTGTGCGACGGTGGCGGCGCACAGCAATAGGCTCGATGTCCATCGGCGAGATGCGATGCGGCTCCGACTCGGCCGGCCGTTGAAAAGCGCCCCGACGACGCAAGCGCCTCCGGAGCATGGCTATCTGCGCCAGCATCATCGCAGCCTGCCGGCCGCGGAGAGCGACCAGAGCGAGGTCAGCGAAGGCTCCGGCCCTCCAGCCCGGGACCTGCGCTCGGGGCCCAAGGCACAGTCAACCCACCGAGGCGCGAACCGCAAGCGTGCCGGAAAAGCCCGCCCTGTTCGCACACGGCCCAGCTCCTTGATATCGTTTGGCTAATCGCCGCCGCCCGCGACGATCCTCCGCCGGCGCGCCGGCGGAAGAGCCCGCTTCGCGATCCGAACCCCGTTTTGCTCGTTGCCGCAATCAGGTAAGAGCAAGGGC # Right flank : TTTGGGCCGGTCTGCGGAGCATCCGCAGGCCGGCTGCACTCCCGCGTGGGCGTATGCCGTCATCCAGACGAGGAGCTTGGACAGGCGGCTCGGGGTCGTCCCGAACTTGCCAGCTTCATGAAAAACGGGCTTCGATGCCGGAACGTCGCTTCAAAGCCTGCTTTGATGTGGCGCGCCGCTATGCAAGCCGGCTTTCATAGCGAGGATCGGGCGCCCGGAGCGGGAAGGGAGCGCCGCTGTGCCGGCATCCGTGCCGACGAGTGGTGCCTCGTCTTCCCTGTTCGTTCGCGACCTGCGCGAGCGAACGGGCTCCGCAGGCGGACATCAAAGCGTTGATTTTCTTGGATTTCCGCGGAGACGAGGGGATTCGAACCCCTGATACGTGTTACCACGTATAACGGTTTAGCAAACCGCCGCCTTCAGCCACTCGGCCACGTCTCCTGCGGCGGCCAAGCCCTAACCTTTTCGCGGATTCCGGTCAACATGCCAGTTGGGTCATG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATGCGGGGGGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.60,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [9-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //