Array 1 51627-53691 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011374.1 Moraxella bovoculi strain 58069 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 51627 36 100.0 27 .................................... TTTTGCAAGGCTTTGCGGTTAATTCCC 51690 36 100.0 27 .................................... CTGTTAGAGTCCGTCCAGCTATCTTAG 51753 36 100.0 27 .................................... TTATGACGCTATATTATAGCATGGTTT 51816 36 100.0 28 .................................... ATGGCGATGCAATCAAAAGGATTAATCT 51880 36 100.0 27 .................................... TTAAGTCTGGCTCATCACTGCACAGAT 51943 36 100.0 28 .................................... AGCTTCAACCTTAACCGTGTCAGTTGTC 52007 36 100.0 29 .................................... AGATTTAACTATTGACAATACGCCAGCTT 52072 36 100.0 28 .................................... ACAACCACTCGGTTTTTTGATTTGACAT 52136 36 100.0 27 .................................... GGAAACAGTAAGGTGTAGTATTATGGC 52199 36 100.0 27 .................................... CCGTCCAGCATTATCTCGATGCGATAG 52262 36 100.0 28 .................................... ATGATTTGCGCAGGACGGCACGCACCAA 52326 36 100.0 28 .................................... AGATAGGCATTTGAAAAAGAATTTATCT 52390 36 100.0 28 .................................... TCAATCATTAGCCATGCCAAACTTTTAT 52454 36 100.0 27 .................................... TTCGTCCTTTATACGCACCCCTTGCTT 52517 36 100.0 27 .................................... AAAGATGGTTGCGATGGTATTTTTGGG 52580 36 100.0 27 .................................... GCTTCAATCTTGGCAAGTGTTTCATCA 52643 36 100.0 29 .................................... AGACTAATAAGAGAGTATATTCGCACCGA 52708 36 100.0 27 .................................... TTTTTGTCAACTCTCAACCCTTGATTT 52771 36 100.0 26 .................................... GTAAGTATATTTGGACACGCACCAAG 52833 36 100.0 29 .................................... AGTGTTAAATACGAAACACCACCCCGCTC 52898 36 100.0 28 .................................... CCGAGCAAGAACAAGCGCAGATTGAATA 52962 36 100.0 26 .................................... AGTGGTCGGGCGATGAATTCCATAAG 53024 36 100.0 28 .................................... ACCATTAGCAGACAGTGAAAATGGGGGT 53088 36 100.0 27 .................................... AACAATCGACATAATTATCGATGCATA 53151 36 100.0 27 .................................... AATAGTCGCCTTACGGCTATCGGTTAT 53214 36 100.0 26 .................................... TCTAAACTTAGTCTTAGCACCTTTGT 53276 36 100.0 27 .................................... TGTAGCGACATATATATTACTACTTAT 53339 36 100.0 26 .................................... GAGACTTCAAATATAGGCATTTTTTT 53401 36 100.0 26 .................................... TAGTAGCTGTCTAATATCTCTTGTTG 53463 36 97.2 27 .............C...................... ACACCGCCACGCCTACCCCATCCCCTG 53526 36 100.0 27 .................................... TTATGGATTAATATCATGTGATTGGAT 53589 36 97.2 28 .............C...................... GGGAAAGGCTGGGGCTATTGCCAGATGA 53653 36 91.7 0 ......T.......................C...G. | TC,A [53681,53687] ========== ====== ====== ====== ==================================== ============================= ================== 33 36 99.6 27 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TGGTTTTGATGTTGCCAAGCTTTGACATACAAGCAAATGGAGAAGATGTATGATAATCGTCAGTTATGATATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGATAGATTGCAATATTCGGTGTATGAAATCCAAAACAGCGAACGCATTTTAAATATCATCACCGAAAAAATAAAAGCAGAATTTGAGCCTTTATTTACAGGGGCGGACAGTGTCATTATCTTTCGATTTACAGAACGTGAAGTATTAAGGTTTGGCCATGCCAAACATCGCAATGAGGATTTGTTGATTTTATAAAAAGTCTTGGAAAAAATGATGAGGTTTGTTATAATAAGAGAACTAAAGCACGCTCAAATATTTACTTTGCAAACCTCAGTCTTAATGCGTGATTTATCATGTTTTGTCGGTAAAAATGATTATTTTTTGTGCAAAAAACCTGCTAATCTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : TATGAGAATTTAAATGGCTGCGAAGATCAAAAGGCATTATTTCATTAAAATCCCAAAATCACAGATTTATTTTTCTAAAACACTTGTATCTTACGAATTATGATTTATAATATTAACTTATACATATATTACTAGGATTTATAATCGTGAGTACTACCCTGCGCCAGTTGCGCGCTTTTGTGTTGGTAGCTGAGCAGAACAGCTTCACCAAGGCCGCTGAGACATTATGCCTGACGCAATCGGCCTTAAGCGGTCTGATCAAGGAGCTTGAGCAGAATTTAGACGTTAAGCTGTTCGACCGCACCACACGAAAATTGCACCTATCCGATGCGGGTATGCGCTTATTGCCGCAGGCGCGCCGTGTGCTCAATGAGATGTCCGTGCTTAATGAAAAGGTCTCCAACCTAAAGTCCTTGCACCAAGGACACATTCGTCTGGCGGTCTCACAGCAGCTATCCGCATCGACGATGCCTAAGTTCATCGCTAAGTTCTGTGAGCTG # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 442382-442000 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011374.1 Moraxella bovoculi strain 58069 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 442381 36 100.0 33 .................................... GGTTAATTATTTCTTTATGCAATTCTGCTGATT 442312 36 100.0 33 .................................... TTTACCAAGGTTGCCCTTGATCCAGCCTTCAAA 442243 36 100.0 33 .................................... CCATAATGGTTAGCAATATCAATGGCTAGGTAC 442174 36 100.0 34 .................................... GAATCTTGAGTGATAATTTGATACAGTTTCATAA 442104 36 100.0 33 .................................... CCGAGTTGTTTAGCGTGTTTCTCTGCAGCGTTG 442035 36 88.9 0 ...............................TCA.T | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 98.1 33 GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Left flank : TAACTTATTTGATGTTAGCATTATGACAACAAAGTCTCTTAATTTGGGGTTTGATAAGCTTACAAAAGTGAGCATACTCACTAAACTCATTTAATCACAAGACAAATCAACATCTGCCCACAAATTAAAAATCACTATCAGCAAACGACCCAACCAATCTTGATCTGTTGTATGATACATCTGAATGAATTTCTCGAGTGGTTTCGTAAGCTTATCTCGACTAGCATCAATCGGAGTCATAGCCGCAAAAAGCATTTGCAATTTGGCAAAAAATCATTAAAATAACCATATCCTCTTGGACGACAAGATGCCGCTTGATTATTTAATAGCTTGTTTTTTTTGAATAATCCTAATGGGTGTCAAATTTATAAGTTATTGTTTTTTAAGGATATTTAATTATTTAGATTTCCTTAATCTACATTAACTTTTATTAAACAATTTTTGAACAAAAATTTGATCTGCAAACGTTTGATTTTACTCGTTATTTTTAAATGAGTGCA # Right flank : TTTGGATGTCCCATGCCATTCCGATGAAGTGTAGGACTGGCATGCGTAGGTGTGACTGAATCCATACTATTCACCGCACCATCATCCAACCTTGATCACCACACACCCGCCAGCATCAACTCACCTTTTCCACTACTACCAAACACAGCCCGCATTAATCACGCATCGCTTTTTGTCTTGAAATAAGGTAAAATACCTCCATTTATTTTTCGCTTATTTAATATTATAAAAAAAGGCAAAGCCATGACTGTCCAAACCTTCACCCCAGAAGCCCGCCCCGCCCCAAAAAAAGCCATTCAGGGCGAAAAACTGCGTGGCTATGATAAAGTCGCTCGCATTCCCATTAAGGTCATTCCCACCGTAGAAACCCCCAAAAAGCCCGACTGGATTCGTGTCAAATTATCCAGCCCTGCTGAAGTGGAGCGTATCAAAGGCACGCTACGCAAACAAAAGCTCTACACCGTCTGCGAAGAAGCCGCCTGCCCCAACCTACCCCAATG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 460248-460697 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011374.1 Moraxella bovoculi strain 58069 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 460248 36 97.2 33 .............................C...... GTCAAAATTAATCTTCTTTACGCCGTTATCAAT 460317 36 100.0 33 .................................... TGTATCTCCGTTAGTTAATTGATAAGGTTTAAG 460386 36 100.0 34 .................................... CTAATGCGTTACTCATAAGATTATCCTTTACGCT 460456 36 100.0 33 .................................... TTACTTCCTTTGGGTTTCCATCAGCACCTCTAA 460525 36 100.0 32 .................................... GTACGTTTGACACGCTCCTGACGGATACCTGC 460593 36 100.0 33 .................................... TCACACCTTCTGCGTAATTCATTGGATTGCTGG 460662 36 88.9 0 ...............................CGTG. | ========== ====== ====== ====== ==================================== ================================== ================== 7 36 98.0 33 GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Left flank : CATATCTTGCAAAAAACGTCTTGCCAAAGTCTATCGGCTTATTAGTAGCCATGCAATACCCATACAGCGGTCGGTGTATTTTGCCACGCTCAAGGCTGCCGATATGGACGTCATCATCGCACGACTAAAGACAATCATCACAAAGGAGGATGATGTTAAGATATATGAAACGGAATCATTAGAAAATGCACATATTCAAGGCAACCGCTCGCCAAACATACAGCTGTTCGGCGAGAATGGGGGTCAAATCATGTGGTAAAATGCTTGTGGATTGCGATGATTCTTGTTAAAATAACCGATAATTTGACGTTGGTCGACTATTTAATAACTTGGTTTTATATAAATAATCCTAATCGGTGTCAAATTTATAAGTTATTGTTTTTTAAGGATATTTAATTATTTATATTTCCTTAATCTACATTAACTTTTATTAAACAATTTTTGAACAAAAATTTGATCTGCAAACGTTTGATTTTGCTCGTTATTTTTAAATGAGTGCA # Right flank : CTTGTCTGCAATTATTTATAGAACACCATTATTAACAAATCCCGCTCTAATCTTGAGATGGTTTATAAATCTCAGGGTTGGGGTGGGTATTTTGGCTGTTTAGGCTATCGGTGAACTGCATTTAGGCATGATAAACTCCCTAACCATTTTTTAAATAAATGTTGGTTATGAAAGATAATTTTTTGAATTTATGCCAAATTTCAGTTATTATAATTAAGAGTAAATTTAGGCGAAAATGCCTGTAAAATCAACGTCTAGGCACTTGATAATTGTTTGTATAATGATAACCACTATCAAGCACTTATGACCTCACATGGAGATAAAGCTATGTCGCAAATGCTAACTGAATACAGAGCTCACGTCGCTGAGCGTGAAGCGCTAGGTGTACCACCACAGCCATTGACCGACGCACAGACAGCAGATCTGGTAGAACTACTAAAAAACCCACCAGCTGGCGAAGAAGAATATTTGGTTCATCTATTAGAGAATCGCGTACCAGC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 833192-838301 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011374.1 Moraxella bovoculi strain 58069 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 833192 32 100.0 34 ................................ ACTTGTTTTATGAAGCATCCATTGGATTATCAAA 833258 32 100.0 34 ................................ TATTAATAATAGGAATACTATGCACCATATAAAA 833324 32 100.0 33 ................................ TAGCATCTCTCGTCCACGCTGTAGCATTGATGC 833389 32 100.0 34 ................................ TTTTTCTTGATCGATAGACGACTGATTAAACAAG 833455 32 100.0 34 ................................ TCATCCAGCCAACTAAAGGATATGGCGCGCACGC 833521 32 100.0 33 ................................ ATTGTCCACAGCAAGAACAGACGGCATGGAAAG 833586 32 100.0 34 ................................ GCCCCATAACACACGACCGCTTTATATCCAGCCT 833652 32 100.0 34 ................................ ATCGGTGCGTGCAAAATCGGGTAGTTTGATGTCA 833718 32 100.0 34 ................................ CGCTTGGTCTGATTGTGGACTTAAAGACAACCGA 833784 32 100.0 33 ................................ CGCCGTGCTGTATATATCGCCAGCCAAATGATT 833849 32 100.0 34 ................................ TCCTTTCTCATCGCCATTGTATTTGATTGTATAA 833915 32 100.0 34 ................................ TTTTAAAATGGTATTCGATGGTGTAAATTTGGTG 833981 32 100.0 34 ................................ AATCGTGTGTTGCCCGAAACTGTTCACGTAGACG 834047 32 100.0 34 ................................ CATTCGCCGAGCTATTGTCGTTATATCACGGAAA 834113 32 100.0 33 ................................ GGCTTCTTATCAGGCGCATGGCTCATCGAATAC 834178 32 100.0 34 ................................ ACCCCGTTATCTGCCACGGTGGCGTTGGCTTTGT 834244 32 100.0 33 ................................ TATCTCATCTCTTATGCCGATTACAGGCACAAT 834309 32 100.0 34 ................................ CCCTAAGCCGTGGATTTTATCCGTGGCTTTTTTT 834375 32 100.0 34 ................................ AGCGGTAGGCTTGATATGGTTTGGCTTCGCAGTC 834441 32 100.0 34 ................................ ATCGCCATCTCTCAATGGTTCTGACTCAGGCTTG 834507 32 100.0 33 ................................ TTTTTGTTATAATGAAAGAAAGTTTTTTATTGG 834572 32 100.0 34 ................................ TCCTTCGGGATTTGTAAAAACTTGATAGCTATTA 834638 32 100.0 34 ................................ AGTCATAGCTTGCGTGCTTGCCTTATCCGCCACC 834704 32 100.0 34 ................................ TGTCGATACCCCTAACATGGGCTAGGGGGCTTGG 834770 32 100.0 34 ................................ TTTTTCTTGCTGTTTTTCATCATCGCCAATGTGA 834836 32 100.0 34 ................................ ACTTCGCAACATTGGCTATCCAAGTAACGCAAAC 834902 32 100.0 35 ................................ AAGGCATTATCTGCGTTGATGTGTGTATTATGCAA 834969 32 100.0 34 ................................ CACAGATATGGCTTGGACGCTGATGTCTGTTGTA 835035 32 100.0 34 ................................ TGGTGAATTTTCTTTTGAGATGCAGTCTGATGAA 835101 32 100.0 34 ................................ CCCTACAATGTTAATCAAGCAAACTTAATCAAAG 835167 32 100.0 33 ................................ TTGCTATTGCGCTGTTAAAGGCGTTTTGGTAAA 835232 32 100.0 34 ................................ AGCCAAGCTGGTTCGGTTGCCCTTGCCTTTGGAT 835298 32 100.0 35 ................................ AAAGTTATCTCTTGCCGATTGCATTAAAAATTTAT 835365 32 100.0 36 ................................ TGCCGCCTTTTTCTTAGGTTTGGCTTTCTCAGCGAT 835433 32 100.0 34 ................................ TACCGTTATTTTTTGAAATTCAGGCGGTAGGTTC 835499 32 100.0 34 ................................ CCAACACGCCTAAGACACGATGACTTGTTTTTAG 835565 32 100.0 34 ................................ CAAAGACTGCTTTTTAAGCCAATCATAGTAGCTA 835631 32 100.0 34 ................................ ATTCTGAAATTTACTAATTGTGAATATCAAAATT 835697 32 100.0 34 ................................ ATGCGCTGACCGCCATGGATGTCGCGGCGGTGAC 835763 32 100.0 34 ................................ ATTTTTAAGCACCACGCCATAATCGCCAAACACC 835829 32 100.0 34 ................................ AATTGTTACGCTGTTCATGCTTATCCCATTCTTG 835895 32 100.0 34 ................................ TTTTGATATTAAAGGTTTGCCGTTAGCATCATGC 835961 32 100.0 34 ................................ TAGCATCCGTTCGGCATCTCGCACCATCTGATGG 836027 32 100.0 34 ................................ ACATCGCGGTGGCGCACAAGGTTGGCAATCGCCT 836093 32 100.0 34 ................................ ATAATCAGGGTGTTTTGAATTAACTGGCATAATG 836159 32 100.0 35 ................................ ACATCGCGGTGGCGCACAAGGTTGGCAATCGCCTT 836226 32 100.0 33 ................................ CTATTCAATGATACACCCCTTGCCACTGATTGC 836291 32 100.0 34 ................................ ATCGGTTTTGCATTCGGCTAAGGATTTGGGTGTA 836357 32 100.0 34 ................................ CTTTGCTTTTGTGTACAATCGCTCTACTTAAAGC 836423 32 100.0 36 ................................ TTCGTCTATCTGGACAAACGAACTGGCGAGCAGGTG 836491 32 100.0 34 ................................ ATCGCCATCTCTCAATGGTTCTGACTCAGGCTTT 836557 32 100.0 34 ................................ TCGGACATGCTGACTAATTGCAGCTGACAAATCC 836623 32 100.0 35 ................................ TCCTTTGCGTAATACCACGCCTGCTGTTCGGCTGT 836690 32 100.0 34 ................................ ATCGGTGAATAATGTCGGTCTGCCCCTTGTGGGC 836756 32 100.0 33 ................................ ATAAGTAAATTTAAAGCCTTCGGGCGTTGTTGT 836821 32 100.0 34 ................................ TATCTCTTCAGCTTGCTCACGCCAACCCGCCTGC 836887 32 100.0 34 ................................ AGCGCGGGGCGCAAGAGATTTAGCTGTTTTTTGC 836953 32 100.0 34 ................................ AGCGCGGGGCGCAAGAGATTTAGCTGTTTTTTGC 837019 32 100.0 34 ................................ ATCTCTCAATCCCCCATCATATATTTTTCAATAT 837085 32 100.0 34 ................................ ATCTGCTTGCCGTTTGCTACCGCATTTGCCACAT 837151 32 100.0 34 ................................ ATGATTAACCCAAATAAAAAAGCGTTGGGCGTAA 837217 32 100.0 34 ................................ ATGGCTTGGATGGTGTCCCTAAGCTCGGTAATGG 837283 32 100.0 34 ................................ CATACGTCCATGATTGATGCAATCGTGGGCTTTT 837349 32 100.0 34 ................................ TGTTGCACATGCCAATACACCAAAAAACCTTTCT 837415 32 100.0 34 ................................ AATATCCATTTTGGTTTTTTGATTTTGCGCCCTG 837481 32 100.0 34 ................................ TAGCTCCACTCTTTTTGTCAAAAATTGGCAAAAT 837547 32 100.0 34 ................................ TAACGAGTTGGCTAGGGCGTTAGGGTATGCTGAA 837613 32 100.0 33 ................................ ACCGTTAGCACAGCCATTTCAAAAATGGATGCT 837678 32 100.0 33 ................................ GAGCGCGCCATGTTCGCGGATCTGGATCGCGAC 837743 32 100.0 33 ................................ AACTTATGGCCGGCCTCTAAAAATGCATTGTCC 837808 32 100.0 34 ................................ TGTCAATGACTGCCACGCTCTTTGCTACTGCTTG 837874 32 100.0 34 ................................ CCACGCTTGTTTTTCGGTGGTTGCGCCTGAGTAC 837940 32 100.0 35 ................................ CTAAAATCTGGAGACCGCAAAAAATGAAAACCTTT 838007 32 100.0 34 ................................ GTAACCAGCCACAACCAAGTCATTGGCTTTAACA 838073 32 100.0 34 ................................ ATACCACATCCCCACGGGGTTCTTTTGCGCCCAG 838139 32 100.0 33 ................................ TTTGGTGTTAATAACAATCTTAGCGCCATTTGG 838204 32 96.9 34 ..........................C..... TGTTGCTAGCATGCAAATCAACAATGGCAAAAAG 838270 32 87.5 0 ............................TGCA | ========== ====== ====== ====== ================================ ==================================== ================== 78 32 99.8 34 ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Left flank : GATGATGAGATATGTTAATGTTAATCAGTTATGATGTGGCGATGGACGATGGCGGACAAAAACGCCTAAGGCATATCGCCAAACATTGCCAAGATTATGGCGTGCGAGTGCAGTACTCGGTGTTTGAGTGCGACATCATGCCCGACCAGTGGGTGGTATTAAAAGATAAGCTATTAAAGGCGTACGACCCTGACAAGGACAGTTTGCGGTTTTATCATTTGGGCAGTAAATGGCGTGGCAAAGTGGAACATCATGGGGCAAAAAAGAGTGTGGATTTGTTTCAAGATACGCTGATATTGTGATGAAAAAGAGGTAAATCATGGCTCGCTAACGGGCAGTTCTCATCAAAATACAGGCAGGTTAGCGATGAGCTAAGTTTTTGAATTATTTAACAATTGAAAAGAAAGATAAGTACATTTATAATAAATGGCCTTTTTAAGGCTTAGGTTAGCGATTTTACCCAGTCTAAGCCTTAAAGATATAGCCTTTAAACAAAGGCT # Right flank : AAAATCCATACCTTCTTGACCACCTATTCCAGCCCCAAATGGACAAAGATTCCAATTTAAAATGACCAGTCATTCCGATAAATGCTGGTCATTTAATTTTTTATATGATTGTTATTTGGATAAATCTAATTGATCATATAAGTCAATTTTTTCCGCATGGATTCCCCTGTTAATGTAATAGGATATGATCGGTGAATAATGCGATCTAATATAGCGTCAGCAATGGTCGCCTCAGAAAATAAATCATGCCAATTTGCAACAGGATACTGGCTAGTTATCAGCAGACCTCCAACACTAGATTGCTCGTCAATAATGTCCAGTAACACAGGGCATATCTGTGGTAGCAATTCACCTATGCCAAAGTCATCAATGATTAACAAATCCACCTTGCAATATTTTTGCTTAACCTTGGCAATACTACCATCAGCGATTGACAAAATGATATCTTCATACAAATCAGCAGCTTGAACAAACATCACTTTTCTTAAATTTCGGCAAGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //