Array 1 27832-30178 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSCW01000006.1 Marinobacter lutaoensis strain T5054 DSM17466_contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================================================== ================== 27832 28 75.0 67 ...AC.....C.C...C.CC........ TAGGGGGCAGGCCCGATTTTATTGGGTTGTTCTTTAACAATCAGGACGTTATGGTTTTTTTGTTCTA A,G [27842,27847] 27929 28 100.0 32 ............................ TGCCACGCCTTCGGTGGCAGCGTCCAGAACGC 27989 28 100.0 32 ............................ TTGTTAACCGTGCTGCTGCTGCTCTTTGATTT 28049 28 100.0 32 ............................ ACGTCATCATAGGCGCGGTCACCCAGGGCCAA 28109 28 100.0 32 ............................ AAAGACACGTCCAGCTCGTAGCGGGTGTCCGG 28169 28 100.0 32 ............................ TTTTCGTCATCTGGTGTCGTGTAGCGCAGGAA 28229 28 100.0 32 ............................ CAGGACGATCACCAGTTCGCGCTCTCCCAGGA 28289 28 100.0 32 ............................ TTCTCGGATGAGGCGCTGGCGAAACGTCAACC 28349 28 100.0 32 ............................ CGCATAATGTCCCGATTCGCTTCGTTCGTATC 28409 28 100.0 32 ............................ TGTAATGCTGATTTCCGGTATCAACGAACTGT 28469 28 100.0 32 ............................ TTGATGGCGCCGGCGGCGGTTTGGGCGATCAC 28529 28 100.0 32 ............................ CTATCCAAAAACCGACAAACCGAGTCAGAAAG 28589 28 100.0 32 ............................ AGCAGTTCATAAGCGCCGGATGAGGCCGCAAT 28649 28 100.0 32 ............................ ACCCAGTCACGCATCAGGGCGGATTGGGCATC 28709 28 100.0 32 ............................ ATGCCCAGGGGCACCAGCAGCGCATACGGGCG 28769 28 100.0 32 ............................ TCATGTCGCCGGTGTCGGTAATCCCGGCAACG 28829 28 100.0 33 ............................ CTGAGGAAGGCCCGAGCAAGTACCTGGATACGA 28890 28 100.0 32 ............................ TATATGGCCCAAATGAATGGCGGCTTTAACAT 28950 28 100.0 32 ............................ TCACCGTGATACTCACCGGCACGAACCGCCCG 29010 28 100.0 32 ............................ TGGGCGACCTTGCCTTGACCAGTCAGCGCATA 29070 28 100.0 32 ............................ ATCACCGCCGGAGCTGAGCACCACGCCCTGGT 29130 28 100.0 32 ............................ CAAGTTCAAACGGTCGGCCGCCGCCGATCGGG 29190 28 100.0 32 ............................ TGGACGAAGCCCGGGATCAGTTCCACGCGCAC 29250 28 100.0 32 ............................ GAACTGGATTTATTCGCAGCCGAAAATGAGGA 29310 28 100.0 32 ............................ TGGACCTTGCCGCACCACACCGCGTCACTTGC 29370 28 100.0 32 ............................ GTCGCGCGCTTCGATGCCGAGTTCTGCCTGAT 29430 28 100.0 32 ............................ ATGCTCATCGTTGCGTTGGCGCGGCCGCAAGA 29490 28 100.0 32 ............................ TTTGAGCAAGTGGCCACCGGTGCGGCGCAGCG 29550 28 100.0 32 ............................ TCTACCGCGCCCTGATCCACTCGCACCCAGTC 29610 28 100.0 32 ............................ ATAGCGCCAAAGCGCTGAAAGGTGCTGATAAA 29670 28 100.0 32 ............................ AAACGCCAGGCGGCCTCGAAAGGACAGGGACG 29730 28 100.0 32 ............................ CAATGGCACCGCCGGCCACCGCGCCGATGATC 29790 28 100.0 32 ............................ AGGTTGTCGAGCGTGTCCTCCAGGTAATCGCA 29850 28 100.0 32 ............................ TGTAGGGCCCGGGAATGTGCGCCTGCCTGGCC 29910 28 100.0 32 ............................ AGGCTTCCCATGCTTCAAGCCCGGTTACCAGC 29970 28 100.0 32 ............................ TATGCGATCGTTGAGCGATTGGGTAACCCACG 30030 28 100.0 33 ............................ TCACGGGCAAACGCTGGCAACAGCGCCGGATAT 30091 28 100.0 32 ............................ TGAGTAGCGCAACATCCGCCATCATCGGTGCC 30151 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================================================== ================== 39 28 99.4 33 CTTCGCTGCCGCGTAGGCAGCTGAGAAA # Left flank : GAATCCGATGACATCGGCGTCAGCTTTCCGGACTACAGTCTGTCACCACGGGCTCTGGGCAACCGCCTGCGACTGCATGGAACCGAAACGGCCCTATCGCGGCTGATGGCTCAGGACTGGCTCAGAGGAATGGCCGATCACGTCCGGTATTCAGAGATCCTGCCGGTGCCGGACGCCGTGCACTACCGAACGGTTGCCCGGCGCCAGTTCAAAACCAGCAGCGAACGGCTGCGCCGGCGTCGCATGAAGCGCAAAGGCGAAACCCACGAACAGGCCGTCCGCGCCATCCCCGACAGCGCCGAGCAAACGCCGAACCTGCCGTTCGTGCATATGCGAAGCCAAAGCACGGATCAGCACTTTGTTCTGTTCATTGAACAAGGCGAGTTGAGAGACCAACCGAAGGCTGGCCAGTTCAACACCTACGGGCTCAGCCGACAGGCCACGGTCCCCTGGTTCTGACCCTTTTTTTGGCTGCAAAAAAGCACCTAATAAATCAAAGG # Right flank : ACACTTGATGTCACTGTTCCCACTGACACCCTCCTTTGTTGCTGTCTAGACAAGACAACCAGGCCCCATGGCGCCACAGGCTCACCCGGCCACTCAGGGGCCTGTTTTTTGGGGAGCGTCTTTCGCCAGGCGCCGTTGCCGCCGCGCGTAGCTCCAGGCGCCGATGCTCAGGAGGGCGTAGAGGGTGAGGATGAACACCAGTTGTTCCGGTTGGCGGGTGTATTCGTAGTAGAGGATGAGTACGGTGCCGGTCAGCAGGCCGGCGATGGAGAGTAGGGTGAGGGTCAGGGAGGAGCGGGTGCGGTGGCGGATTCGGAAGTTGGCGACGGCCATGAGGAGGGAGACCAGCAGGAAGGTGACGCTGCCGAATTCGAGGATCACCTGGAGGTTGCCGGCCAGGATCAGGAGGAAGGCGAGGGCGGCCATGGTGACGATGGCGGGCACCGGGATGCGGTTGTGACGTTGGGCCAGGAACGCGGGGAAGTAGCCGTCGTGGGCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCGCTGCCGCGTAGGCAGCTGAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTGAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //