Array 1 122824-121789 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMOL010000007.1 Paenibacillus sp. 1001270B_150601_E10 NODE_7_length_296131_cov_4.47967, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 122823 32 100.0 37 ................................ GTCAACAAGGTCTTGCGTCCAGCCTATATAGTCGAGA 122754 32 100.0 36 ................................ ATGAACTACATGTCTTACAATCGGCTCTTATATCTC 122686 32 100.0 33 ................................ CTCGACTGTATCCAGCCGTTGTTTGCCTACCTT 122621 32 100.0 36 ................................ CACACTTTACGGATGTTCAAGCCTGCCTGCTCCGTC 122553 32 100.0 34 ................................ GTTCCGTCTCCAGTGTATTGAATAGCTTGTTCAG 122487 32 100.0 35 ................................ ATCTGGTAGCCGAAAACGTCTATCGACTTGTCCAC 122420 32 100.0 33 ................................ ATAAATGCAGCAATACCCGATTCATCCTCAAGA 122355 32 100.0 35 ................................ CCGATGACGAACGTCGTAGCCGCTGGAGCATTCAT 122288 32 100.0 35 ................................ ATCCGTGATGCTTCCCATCATCTTAAACAAGGCTT 122221 32 100.0 36 ................................ AGTTGAGCACACTCATGACAAAGATGATAGACTTCA 122153 32 100.0 35 ................................ ATATTTCGCGACGATTTGACTACTCTAAATAAATA 122086 32 100.0 37 ................................ TATTCCTCTTTAGGTTCTTCCTTCGAACGATTCGCAA 122017 32 100.0 33 ................................ AACTCCGCCCACAAACGCAATGCTTCTGCCTTA 121952 32 100.0 33 ................................ GATTACTCCAGCTATGATTGAATACAATCCAGA 121887 32 100.0 35 ................................ GATCAATTCTGTTAACTCGCGTTTTTGTTCAGGAG 121820 32 75.0 0 ...........CT...A....A.....AGCT. | ========== ====== ====== ====== ================================ ===================================== ================== 16 32 98.4 35 GTCGCACCTCATGTAGGTGCGTGGATTGAAAT # Left flank : GCCGGGACTAACGAGAGAGATTGCCGAGAACTCGATCTATGCGTATATCGAGCATACGCTGAACTTGCAGATCAGCTATGCCCGCCGTGTCATCGAGGTGCAGCCATGCAGCGAGGATGACCGCAAGTATCTGGATTTGAACGGGACGGAATATGTAGTCGTTGTCAAAAACTTTACGTACCTGTACGACGGAACGCAATTCGAATATACCGAATCGAGAATGCGGCTCGACAAGTTCTATTTTTCCGATATCGCGCGGAGATCATAAAGTGAACCGTAACATGAGTCGTTCGGCTATCAGTAAGGACTTGTTTTTAGTTGGTGCGAATGTAGAGCGTACATGATTTCCCTGGGGCATTCGCACCAACTATTTTACAAATTCATCTAATTTGGTTACATAATTGTAATATATAACGTTTGATTTCAACCAAATAAAGTAAAAAATCAATTTATATATTGTGATAAGAGCCGATTTTTCATAATTTTGGTCAAAAATCGGA # Right flank : GCAGTCTTCAAATGTAGATCACTGAATGGAAAAAGGTGCACGCTCCTCGAAATAGGAGAGCTGCACCTTTTTCCATTATTCTCAATAGAACGCACTTTATCCTACAGAGAGTTCACTTCATATAAATCCTCTGATACGCCTTGCATAAAGACTGTTGCTTCACCCGCATGAAAGATTGTCAGCTCGTGCATTGCACGTGTGCAAGCTGTGTAGAACAGATTGCGCTCGCTCTCATCGTTGAATTGCTCGGCGGAGGCGTTATAGATGACAACCGCATCGAACTCAATCCCCTTCGCCAAGTAGGTAGGAACAATGACAAGCCCCTTGCTGTATGAGCTGCTTTCCTTTTCAACCAAGCGGAATGGAAGGCGATCCCCGATCCGCTCGGCTGCTGCTCGTGCCTCCTGAACCGTTTTACAAATAATCGCAATGGTTTGATGTCCATCTGTCTCAAATGCCTTCACCTGTTCTACGATGGCATCAGTAAGCTTCTCTTCGTT # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCATGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 288402-289909 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMOL010000002.1 Paenibacillus sp. 1001270B_150601_E10 NODE_2_length_835346_cov_4.31798, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 288402 32 100.0 35 ................................ CACACTTTACGGATGTTCAAGCCTGCCTGCTCCCA 288469 32 100.0 33 ................................ TACCATAGGTTATCTCGAACGCCCTCACCGATC 288534 32 100.0 36 ................................ TTGATGTTAGCCTTGGTCATTTCACTATCTGTACCC 288602 32 100.0 35 ................................ CTGTAACGAAAGAATTAATTCAACGTTTGCAGAAA 288669 32 100.0 36 ................................ GATTTTCCTTTGCCTATCGAGGTTTTTGGTCTTCAA 288737 32 100.0 35 ................................ CATTATTTCAGCATAAGCGTACTTTAGAGTATACG 288804 32 100.0 36 ................................ ATCGCACCAATCAGAGGCGTTTTCCCATTTTTCCGA 288872 32 100.0 33 ................................ TATTTTCTCCTCATCGCTTTTCGCGAGCTTGTC 288937 32 100.0 37 ................................ ATACGAATCATGTCATCCAACTCATTGATAATGTCTT 289006 32 100.0 35 ................................ CCTTCTGATCAGGCAAACAATCCGATTCAGTTAGT 289073 32 100.0 34 ................................ CTTACACCAAAGCTATTGTCCTGCCCTGAACCCA 289139 32 100.0 37 ................................ TGCATGAGCGCCTCCTAAAAGTGCGAAGACTCGGACA 289208 32 100.0 33 ................................ TTTGATATAACGATAGGCCGAAACGCAGATCCA 289273 32 100.0 35 ................................ CTGTAAGTGGAGTTATCAAGGAATCTAGTTATCGT 289340 32 100.0 34 ................................ GCCTATCTCGTATAAAACCTTTGCGGCTCCAGCT 289406 32 100.0 34 ................................ CGTATTGAGTACGCATAATTTTCGTTATACGCCC 289472 32 100.0 37 ................................ AATAAACGATCTGCACAAAACCAATGACAGGATGATA 289541 32 100.0 35 ................................ GTTGGCATATAGACTGATACAGGACGATCTAAAAT 289608 32 100.0 36 ................................ ATACTCAACCTTATGGATCAACACCATGTCATTAGG 289676 32 100.0 36 ................................ ATACTCAACCTTATGGATCAACACCATGTCATCAGG 289744 32 100.0 36 ................................ TTTAACTGCATCTCCGACTTTATCAAGGTTGAAAGC 289812 32 96.9 34 ..............................G. CACTGTCTAAGTTGGAAGGAATGTTGAATGCTCC 289878 32 96.9 0 ...............................G | ========== ====== ====== ====== ================================ ===================================== ================== 23 32 99.7 35 GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Left flank : GCCCTGAGGATGACATCCTTATTGTGTCTTCTTCCAAGAAGCATGTGAAGCGCGCGACCAAGATCTTGCATCAATCCGGCTTTCGGACAGCCGGCAGTCTAGTATGGAACGATACCAAGGATTTGCCTTGCAAGGGGAAGAAAGCAGCATAATGTAGATAGGCAAAAGGCGAGTGCTGAGGCACTCGTTTTTTTGTGTTGTGGTTGTTAATGGAAGGGATATACGATCATTGTTATAATAAAGTGGCAATGGATATTCTAGATTGGTTTAATACTATTTGAAAAAAGTATATGAGCGCTACATTAAAGAAATAGGTATTATGGTGCGAATGTATAGTGCACATGATTTACTAGGGAGTTTCGCACCAAGTTTTATCCATAATATTGCTATATTTCCAAAACAAAAGATGAATTTCTATAATTTATGACTAAGGAAATCACTGCATTGATTGTTTTAATCAAAAACTTGTGTACATTACTTGTTTTTGACTGATATTCGCT # Right flank : GCATAGGATGGGCCCAAAGGGAGTTTTTTTCATGTCGACCTCATATGTAGGTTCATCATTTGATAAAAAATATGATCTGTAGTGTTCAATTTTTAAATTCGAAGAAGATATTACGTTGTGGTGAATTTTCAAGATATTAAAAGGAAAATGAGATGGGTAAAAAGAACTATCAATATCAGTAGTCTTTAATGTTTAATAGCGTAGACGCCCTTAACTTACAGTTATTGTAAGTAGGGAAAAAAGCATAAAGAAAATGAGGTGTCATTATTGACCAAAGATAAGAGCGAGATGGAGCAGCTATATGATCTTGTGAACCGGGTGACGGAACGTCACAAGCAATGGCAAGAAGACTTCGATATAATTGTGGTCACTCCTATGTTTGGTGGGAGCAGTACTCCTGGAGATGTGGACGAGCAGTTCCCAATTCGCAGTTCCTCGGTTCGCGGCCATTTGCGTTTTTGGTGGCGTGCGACAAGAGGGGCTCGATGCGAGAATGAAGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 298140-299640 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMOL010000002.1 Paenibacillus sp. 1001270B_150601_E10 NODE_2_length_835346_cov_4.31798, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 298140 32 100.0 34 ................................ TTCGAACGGAATCGTGCCAGGCGTATTTCTAAGT 298206 32 100.0 33 ................................ GAACCCCTCCCATCCCTTTTTCAAACCCATGTC 298271 32 100.0 35 ................................ CTCAACGTTGATCATCTTTGATGGTGACCAAGCAG 298338 32 100.0 33 ................................ GCGACCTCTTCGTCAAGCTTTTCGATTTCCGTA 298403 32 100.0 34 ................................ TGCTTCGAACAATTCTACTTCCACATCTCTTCCA 298469 32 100.0 33 ................................ CATCTTTTTATTTCTATAATAGCCCAAGATGAA 298534 32 100.0 36 ................................ ATTTCCGAGATTATCAAATGTATCGCCGACATATAC 298602 32 100.0 34 ................................ TTTTAAAAATTCGTATAAATCAGGATTTACTTTC 298668 32 100.0 36 ................................ TGGAGCGTCTTGGAGCTTTTTCACGATGTGCACCCC 298736 32 100.0 34 ................................ AGCAATCTGATACCACGTTCCAAGCAACCTACTA 298802 32 100.0 37 ................................ GATAGCATGGAATATATCTTTGAAAAAGATAAAAAGC 298871 32 100.0 32 ................................ CAATCCGTGTAAGACGTTTGCCCGAGCCTTAC 298935 32 100.0 36 ................................ AGTGGGCGTCACGTAATGGCAACATTGGCAATATGG 299003 32 100.0 36 ................................ GACGAAGAAGCATTTTTGAGTGCGCAAGGATGGGAC 299071 32 100.0 36 ................................ TTTGTTCTTCGATATAGAGTATCGAAGTAAACAACA 299139 32 100.0 38 ................................ TTTTGGTTTACGATTATAGTAATGTTTTGCAAGATAAG 299209 32 100.0 32 ................................ TGATTATGGAACGAAGTATGAACCAAACAAAC 299273 32 100.0 33 ................................ TCTTCGCGATCAGGCGTCAGTACAGGGCGGATT 299338 32 100.0 36 ................................ TTTCAGAGCCTTCACCGCTGCTGGATCCTCGCTCGC 299406 32 96.9 39 ..........................A..... GTGAAATGTCCAAGCAATTACCCGCAACAGCGACCGAGA 299477 32 100.0 35 ................................ ATTGAAGAAACTCTTATCATTTGAGTCGATAAATA 299544 32 96.9 33 ...........T.................... AATGGGGTTGGATAAATTCAAAGTAAGACCACT 299609 32 81.2 0 ...........T.........CTA......CG | ========== ====== ====== ====== ================================ ======================================= ================== 23 32 98.9 35 GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Left flank : GCTCTTGGTATGAACAACTAAATCATGCAGATAGACAATATGAACGAACCGTGAAGAAGATGGATGCTAGCATCGGAGATGTTACGCTAGAACAATATAGAGTAGGATATTGGGAAATAGGGGAGGATTCTAATAAAACCAAAAGTGCAACTGATGGCAGTAAAAATATGAAGAAGGAAATATCTTTGCTGTCTTTGATTTTCCAACTCAACCAATTGCTAATGCTAGTTAATAATCCTATGCTATTCCCGCATCAAGCATATGTTAAAATGTTTAATAATTGCATCAATGAAACGGGTGAAAAATAAGTTTCTTGATTGGTTCGGCTGATTAGGTGCGAACCCCAAGTGCACATAAATTCCCTGGGAGATTCGCACCTGGCTCTACATAAGGCTTAAACGCTATTTAAGCTAAAACGGACATTGCAATTTGAAGCAGATAAGTGGATTCGCACTTTTTGGGCTTTGAACCCTTGTGTAGAGCGGGCTCTCAGGGCCGCT # Right flank : GTCGTATCGTCAAAAGACAACAAACCTATTCCTTGTGAGTTATCAATTGAAAATTGTGATCAAAAAGCGAGTGTATATGCACTCGTTTTTTTGTTTGAAAGAAAAATAAAAGGAAAATAACTCGAATATTTACTCGGAACATACATTCGCTGACAGAAAGCTGTCATCATATTCCTTTATGATAGATCTAAAGATCACAAGGGAGGGAGATCAATTCGTGACAAGAGAACAACAACTTCATCCGAATGTTATTCCTTATTGGCGTATAACTCGACTAATCTCACTTTTGAAAAAGTCCGCGATTGCAGGGATCCCCATTACTGTTCATCTCATTTGGCTGCCAACATGGACATGGATCCTATATGTCACCGTTACATATGTTTCATATTTATGGCTTACCGCTCTATTTCATATTTTCTATGGTGTACGGTATATGTATGTTCGAAGAGGATACTTGCTGACGACTGACGAGATCTTGATACGTTGGGGAAATATTTGGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 311347-313248 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMOL010000002.1 Paenibacillus sp. 1001270B_150601_E10 NODE_2_length_835346_cov_4.31798, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 311347 32 100.0 35 ................................ CAACACTTGTGCAAGGAATGTTAACTTTTTTTGCC 311414 32 100.0 33 ................................ CCATGTGCATCCTCCTTATAGGTGAAAACTATC 311479 32 100.0 33 ................................ ATTCCGAGGATTAGTAGAAAGCAAGTCTTGCAT 311544 32 100.0 34 ................................ TTAAAACTCTTCCAGAAATATGCGTATGCCCTTA 311610 32 100.0 35 ................................ TTACAAGCATTTTAAGGGCTATCAAGCTTCTTCCA 311677 32 100.0 34 ................................ AATGATACCAATCAGCAGACATACAACAAGAATA 311743 32 100.0 36 ................................ CGTTTCAGCTAAGCCTGGCGGACTCTTGGACGGTCA 311811 32 100.0 33 ................................ CGTAACTTGTTTGTCATCTTTTACTTTTTCCCA 311876 32 100.0 34 ................................ TATTTCGATGTGGTCTATCAGAAGAATATCATAC 311942 32 100.0 35 ................................ CCGTAATCCGTCACAGCAGCAAACATGCCCGTTGA 312009 32 100.0 35 ................................ AATTTGCCTGTAGCAACTGCTGGTGATCGTCTGTC 312076 32 100.0 34 ................................ TCGATGATCTTGATCTTCTCGTCATCGAACATGC 312142 32 100.0 35 ................................ TCGATGATCTTGATCTTCTCGTCATCGAACATGCC 312209 32 100.0 35 ................................ ACGGAAATCGTTATTGCTATTAAGGACATCATCAG 312276 32 100.0 36 ................................ TTCGAATTGCGGCAGCACCCTAATACCGTTGACGCC 312344 32 100.0 36 ................................ CTGGTATACGTTGTGGATCTGCTTCTGCAGCTTCTT 312412 32 100.0 35 ................................ GGCAAGACACCCTCTTCAATTGAGGATATTTCGGC 312479 32 100.0 34 ................................ AAAGGTTATTGAGTTGAAACGGGGCAAGGATGGT 312545 32 100.0 36 ................................ TTGGATCAAAATGTCGTTTTGTTCGATGGGGTTGCG 312613 32 100.0 34 ................................ ACCTCCTTGTTAGGGTATACGACGTGACTAACGG 312679 32 100.0 37 ................................ CGTTCGTTTCTCGGGTGTAGTCAAAGGATGTTCGATC 312748 32 100.0 36 ................................ TTAATTTGCAAGAAGGTCGTTATTATACATGGAATG 312816 32 100.0 38 ................................ GACGAAGAAGCATTTTTGAGTGCGCAAGGATGGGACAA 312886 32 100.0 36 ................................ TAACACATCGAGCAGCAAAGGCAGAAGTAAGAACTC 312954 32 100.0 34 ................................ ACGTTGAAGCTGTGTTTCCAATGTGCTAAATATT 313020 32 100.0 35 ................................ TGGAGCCTTCAATTTCCAGGATACCCTTTGAGCCC 313087 32 100.0 32 ................................ ATACAAATAGTTAGCACTTAAACTCACGCTTC 313151 32 100.0 34 ................................ GAGTCTTACAACGACTTGTTCTTTACAGCCCTTC 313217 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 29 32 100.0 35 GTCGCACCTCATGTAGGTGCGTGGATTGAAAT # Left flank : GGAAGTAGGTGCCAAGATTGTTGGTGTTAATCACTTACGATGTTCACACGGTTGATAGTGAAGGTCAAAGAAGACTGCGAATGGTCGCGAAGACGTGTCAAAACTATGGCCAGAGAGTTCAGCATTCTGTCTTTGAATGTATTGTAGATGCGGCACAATTCACTAGCCTAAAAATACAACTTGCCGAGATTATTGATCCAACGAAGGATAGTCTTCGATTCTATCAGATGGGCAATAACTATAAAAATAAAGTTGAGCATATCGGCGTGAAAGAATCTATTGATTTGGAAGGACCGCTCATTTTGTAGCCTGAGTATATGGTGCGAATGTATAGTGCCCATGAAATCCCAGGGACATTCGCACCATGAATTTCCCATTTTATTACCATTATATATGAGATATGATATGAGAATGATCATTACTAGAGTGAAAATATCAAAAAATTGATCGTTAATTTGTGATTTTTTGATCGAATTCGTGGTTATTGCTCGATTTTCGCT # Right flank : TGGTGGGATGTTAAAAAACGTACAGGGTGTATTGGGGTCGTACCTCATGCATGGATAAATCATCCGATCTTGGTTGACAATCCGACCGATATAAAAGCGCTAGTATTTTTCATTTCAAATGTTGACAAATGTTGACTGAGTTGGAGATAATAAATAAGACCTAGGTGAAATATTGGAAGTAGTTATACATAGCTAATCTCAAGTGAGTCTCATTAACTATTTGCTCTACTCTTTATTTGAATATATGATCATATATTTTTAAGTATTATTTCTAGATAACTTTTTTAACTCTCAATAAAAATATGATTAAGCAGGTGATCAAGTGAGCTTTTTAGACAAGTTCAAAAAGGGAGTTGCAGAAGCTGGAACGTTAGCAAAAGTAACGGTTGAGGTTAACCGATTGAAGCTGCAGATCTCCAATAAAAAAAAAGAAATACAGGAGTACTATTTGCGCATAGGGGAAGCCGTATTCCAAATTCGTCAAGAAGCCGAGTCCGAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCATGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //