Array 1 197805-199083 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAACYH010000002.1 Bacteroides heparinolyticus strain 3012STDY7078512, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 197805 47 100.0 30 ............................................... GATGCTGTTTCAACGTTCGCTAACTCTTTT 197882 47 100.0 30 ............................................... TGCGTTACCATACGGGCGACTTATCAGACG 197959 47 100.0 30 ............................................... CACTACTCGCTACGGTTCTGCTCGCAACTA 198036 47 100.0 30 ............................................... TGTGTGGACTAAGGAGCAATGGGATGAGCT 198113 47 100.0 30 ............................................... ATATGTCTACAGGCGAGCTGTTCCGCATAG 198190 47 100.0 30 ............................................... CTATAATCTTAATCGTGTCACCCGTGTGCA 198267 47 100.0 30 ............................................... GCATGCGACGCCGTTGTTGGAGGTGTTCGA 198344 47 100.0 30 ............................................... AAGGCCGTGTTGGCATTATTGGCGGCATTG 198421 47 100.0 30 ............................................... TGAATTCCCGTCAAGCGTTCCAAACCTGAG 198498 47 100.0 30 ............................................... AAAAAACACCATCTCCTACCTTCGCATATA 198575 47 100.0 30 ............................................... AGGACGCGATAACAGTCGCGCCCACCTTAA 198652 47 100.0 30 ............................................... ATATGTCTACAGGTGAGTTGTTTCGGATAG 198729 47 100.0 30 ............................................... AGCACATACATGTCACATGCTCCGATGTCA 198806 47 100.0 30 ............................................... CGTACTTTCCATAATTACCTCCCCTTACCC 198883 47 100.0 30 ............................................... GCAGTTCATGAAGCCCTTTCTCAAGAGCAA 198960 47 100.0 30 ............................................... TGAAGAACCGTGTCGCGGAGCTGCTGTATA 199037 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 17 47 100.0 30 GTTGTTTCCAATAGGTCAAAGATACTAATTTGAAAGTTAATCACAAC # Left flank : TAAAATCATATATCCAAGTTTTGAACACTAATCTCATAAAAAATAATTTCTTCTCCTACTATGGAAAGATTCAGTGAATATCGCATTATGTGGGTACTCGTATTATTTGATTTACCAACAGATACTAAAAAAGACAAAAAAGCTTATACAGATTTTAGAAAGAATCTGCAAAAAGATGGATTTACTATGTTTCAGTTCTCTATATATGTACGCCATTGTGCAAGTAGTGAAAATGCAAAAGTACATATTAGGAGAGTTAAATCTTTCTTGCCAGAGTATGGACAGGTTGGAATTATGTGTATTACAGACAAACAATTTGGCAGTATAGAACTTTTCTATGGTACAAAAGCACAATCTATAAATACACCTGGGCAACAATTAGAACTATTCTAAAAAAAGAAATCTCACCCGAAAGTGAGATTTCTCCATGAAAACCCTCCCTTTTTTTATTTCTAAAAAAACATTTAACCCATTGATTTACAATCTACAACAAAGAATCT # Right flank : CCCGTTTACAACGGAACTCTTTTCTTCTCCGGTTGTTTCCAATGGGTCAAAGATACCAATTTATAATAACAGAAAAACTTTTCTCCCTCTTCTTTTTATCATTTAGAATCTTTTTATTCCATTTTTTGTTATTACTTTGTTATTTTGAATGCAGACAACACTTAAAATGGATAAATAGATGAATAATAAGACTTATATAATTGCTTTTTTTGGCACTCAGCCCTATGACGAAGTTTCTTTCAATGAGAAAAACAAAGAGTATGCTTTCGAACTCCGCTACTACAAAGGACATCTTAACAAGCACAATGCCATACTAACACAAGGAGTAGATGCTGTTTGTATCTTTGTAAACGACACGGCTGATGCCGAGGTTATCCGACTGATAGCAGACAACGGCGTAAAACTACTGGCATTGCGTTGCGCCGGATATAACAATGTAGATTTGAAAGCTGCAGCACACTACGGCATCACTGTAGTGCATGTTCCCGCCTACTCTCCCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTTCCAATAGGTCAAAGATACTAATTTGAAAGTTAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.30,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 677507-678199 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAACYH010000004.1 Bacteroides heparinolyticus strain 3012STDY7078512, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 677507 36 86.1 30 A..A...A.........GA................. CTGATGGAAGCAAAACACAACGTACCTTGA 677573 36 100.0 30 .................................... TACCAAACGGCGGTTTTTCTTTTAACCGTT 677639 36 100.0 30 .................................... CGTCACAAGGCCTGAATATAGTTCCCTGTA 677705 36 100.0 29 .................................... ACTCGTCTTACTGATAGAAGCGATATTCG 677770 36 100.0 30 .................................... ACGCCAGCGATAGAAGTTTTTCAGCAGGGC 677836 36 100.0 29 .................................... GTCAGCTTCATCTACTAATACCATATCTA 677901 36 100.0 30 .................................... CTTGTAAGGTTTTAGTAAATACTTATTCCA 677967 36 100.0 30 .................................... ACGCTTTGATTTTCGACAATCTTTGTTGCC 678033 36 100.0 30 .................................... TGGTCGACAATCGTCCGACCGGTGTAACCG 678099 36 100.0 29 .................................... CTGATTCTGGGGCTTCGCCATATCTATAA 678164 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 98.7 30 GTTGTAAGTGCCCTTTGTTTGAAGGGTAAAAACAAC # Left flank : ACAAGATTCTGCTTGAAGAATATAACTCTATACAAAGACATATAGTGACGGAAGCCGGTAAGTTTATCTCTTTGTATATGGAGTTAGAGAAGTATTTTATATATAATAATAAGATGCAGTTATTAATAATAGAAGGAGAGCGTAATCGTATAACATTCGAAGAGATTCCGGAGTTAAAGGCGCTTGTAGGGAGAGAACGACGCAATACGGCCTTTCATTTTGGTATTCCTAAGGGAAAGCTCTATACTGAGATAATGAAGGACATAGAAAATGGGGTTATAGAACAAATTGTCAAGCCGATGAACTGTAAGGATTATCGTAGCATTCCAGATGAGAAGCGTGCCGTCTTGGATAAGCTGTATGAATGTCAAAAGAAAGATGGTAAGCCTAAAAAGCGAAGTATAGATGAAGAGAATAGGTATTTTGAGAAAATGATACGGAAGAAATAAGAAGTAGAAGAGAAGAAGATAAGACTTAATGATGATAGACATTTCAAATAC # Right flank : CATAATTTGAGTGGACTGTATAAGGTGGGAGAGATGTATTTCCTCCAGAGCTATCTATGGGATGTATAAATGATAGGTATGTAATACCGAATCGGGATAAAGAACATTAATACATGCCGTACAGTGCGCGTGTTTATCCGGACCGATAAGTTTCTGTGGAAGGATTACCTGAGTTCGAGATAGGTAGTTTCTTTTGCTAAAGATGAGGGGGTTGCACCCTGTCAGGCGGATATTTCCTGAATGTACCGGTTTACGGCGATTAGGCAGAAGAGAGCCTTTTACGCCGACCGCCCTCCCCCTGTTTTGACAGCTGCAATCCTTTGTCGTGACAGAGGCAAGTGTTCAAGCCGACAGACACAAGTCTCTGACGTGACAAACACAAGTGTTTGAGCCGTCAGATGCAAGTGTCTGACAGGTAAGGGGTAAATATTGATAATCAATAGATATTGACTTTGAAATACAGGCCGCCGGGTGAGGTTATCGACCTGCTTCTTATCCGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAAGTGCCCTTTGTTTGAAGGGTAAAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 1264394-1265690 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAACYH010000004.1 Bacteroides heparinolyticus strain 3012STDY7078512, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 1264394 35 100.0 34 ................................... GACATAGTGTCAGATTTTTTTATCGCGAATGGCA 1264463 35 100.0 36 ................................... AGTGGTTTCTTCACCATACTCGATTGTTTCGTAATA 1264534 35 100.0 40 ................................... TTACAAAGCACTTCAGGGTCACCTTCTGCGCAACTGCCGT 1264609 35 100.0 34 ................................... ATACTCTTCTTTATCAGTGATTTTAGGGATAGTC 1264678 35 100.0 35 ................................... TTTGCGTCACCCTCGACACCTTCAGCTTTGATTAC 1264748 35 100.0 32 ................................... TACTGTACACAACATAATGATTAATTTTAAAT 1264815 35 100.0 36 ................................... ATTTTCATCACCTTCAATACCTTCAGCCTTAATTGT 1264886 35 100.0 35 ................................... AACATAATAATTAAAGTTTTAAATTACACAATACA 1264956 35 100.0 34 ................................... GAGAAAAGTTTTTTTAACTATCAAGAAAGAATTA 1265025 35 100.0 35 ................................... CTTAGGTTCTTCCGCGTTCTTAGTAGCGTCTATTA 1265095 35 100.0 34 ................................... AGTCAAATTGACTTTGTTAAATATTTTCACTTCC 1265164 35 100.0 36 ................................... ACACAACATTTTACACAATTTTTTAAATTACACAAA 1265235 35 100.0 36 ................................... ACCTTGTTAAACATCTTTACCTTCACGGTATATGGT 1265306 35 100.0 35 ................................... AAAGTAAGGCAAAGAATTAGCGTCCTGCTGCTTCT 1265376 35 100.0 33 ................................... ATTGTTCAAGTAAATCCATCACCTTTTCTATTA 1265444 35 100.0 32 ................................... ATCAGCACGGATAATAACTTTTTTCCCAATCA 1265511 35 100.0 38 ................................... GGGTAGGCATTATAGACATTATCATACATTTCTTTTGT 1265584 35 100.0 35 ................................... GACGTTCCGTCTGCATTGGCAAAGAGTGTAATATT 1265654 35 85.7 0 .........................AA.....ATT | G,G [1265678,1265684] ========== ====== ====== ====== =================================== ======================================== ================== 19 35 99.2 35 ATACAGTCTACTTCCATCACAACAAGGATTAAGAC # Left flank : AGTCTACCAGCCCGATCGTCGTCATCCTCCTGAAACGGTGCGGATGGTATAGAAGGGAGGAGAAATCATTTGCGAAAATTCAGAAGATGCGTAATAGGTTGATAATAAGAGTAAAGCTGTTTTTCCGATGAAAGGACATCTACGCAAACCATTCGCAAATCCCCACTCGATGCCAAAAGACCACCGCCTTTTGCGAAAATTCCTGTAGGTCTGTTTGCAATCTGTTTATAATCAGAGGTATATGCGGACCTAAAAGCGACGATTTTCGCAAATCCATGATGAATGCAAATGGCTCGTTCTATTTGCGAAGTTTTTTTAGTCGCAATCTGTTGATTATCAATGGAAGTATAAAAACGTATGGCAAAATCCCCTTTTTTTGTATTCAAAAAAACAGTACTTTTGCGAAGATTTTAGAAGAAATAGCGTAAAACGATAAAATACAATGATTTATATCCATAGCTTATTGCAAAGAGTTACAGCAACATATTGATAGTCAGAAT # Right flank : TAAACTGTGTCAGTAAAGACTAAAATATTATTTTTGCTAACACAGTTTTTTTTATGAAAGAAGAATTTGATTTTGAGAGTATCAAGAACAAGGCTATTGAACAGTTAAAAGCAGGTAAGCCTTTGTTAGGTAAAGACGGTGCTTTTGCCCCTTTATTGGAAAGTATCCTGAATGCAGCTCTGGAGGGTAAGATGGATGCATATCCTACAGAAGAAGAACGTCAAATGGGCAACCGCCGTAACGGTAAGATGCAGAAACAGGTGCAGACTCCATTGGGTGAGGTAACCGTATCCACTCCCCGTGACCGTAATTCAAGTTTTGATCCACAATTTATTAAGAAGCGTGAGACCATTCCGGCAGAAGGTGTTGCTGACCGTATAATCGGCCTGTATGTTCTTGGTAACAGCACACGTGAGATTAGTGATTGGATGGAAGAGAATCTTGGTAATCGTGTATCGGCAGATACAATCAGTGCCATTACGGACCGTGTACTTCCGGAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATACAGTCTACTTCCATCACAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //