Array 1 48656-47823 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOP01000013.1 Meiothermus taiwanensis strain A contig00013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 48655 37 100.0 36 ..................................... TTGGTTCCAGCGCCGAAGTTGACGGGGTTATTGTTG 48582 37 100.0 35 ..................................... ATAAATTCACCTCCATCTCTATGGGCTTTTTATAG 48510 37 100.0 37 ..................................... GCGGGCTGCTTTAGCCTGCCGGGCCCGCTCCACCCAA 48436 37 100.0 36 ..................................... AAGCCCGGCAAGGAGGACACATGACCCAGGATATGC 48363 37 100.0 37 ..................................... ATTTTGCGAGAACAGCACCGGCAAGCCTTTGCCATAT 48289 37 100.0 35 ..................................... CTCAAGGCCTGGATCCCGGTTGAAGCTATAGGCCG 48217 37 100.0 35 ..................................... CCCGAAACATAGCCTCTAATACTTTTCGGGCTTCG 48145 37 97.3 35 ...............A..................... TTGAGCTTCGCCATTTTGGCTAACCCTTTAGTTTT 48073 37 97.3 36 ...............A..................... AGCACGCCCCCTAACAGCAGCCACACCACGGCCTGG 48000 37 97.3 34 ...............A..................... GGTTGCCATATCTACCATAGCTATTACATCTGCT 47929 37 94.6 33 .........A.....A..................... CGCTTCAACAGCTTGTCCATTTCAGGGCCAGAC 47859 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 98.9 35 GTCGCACTCGGGCGAGAGCTCGAGTGAGGATTGAAAC # Left flank : GAAACTATGCTACGCAAGACCGAATCGTTCTGGCGAACGAT # Right flank : TACTACGAAATTTCAAATATCCGTCATTCCCCTCTCATCAAAAAGCCCAATAGGATTAGAGCCATGCGCTTATGCATAGCCCTTCTGGTTGCTCTGGGCCTGGCCTGGGCTCAGAATACCCCCGCACAGACAAACCCCTATGCAATTGCTCGCATCGTTGCGTTGGGTCAAGAACGTGCAACGGTGCGTATTGGTAATCAGGTGGCGGAAGCTGAGATGCCCACAGACGGAATCGACTTTCGCGTTGGGCAGTTGGTAGTGGTCTATCAGGCTGACGGAAAAACCTATCTTACAGAACCCTACCGCTTGCATTATCTGTGGGCTTTACTTGGATTGTTTGTGCTTTTCACCATTGCACTAGGACGCGGTAAAGGCTTGCGAGGGCTGCTTGGCACAGCAGCCAGCATGGGCGTTCTGGCCTACGTTGTGGTGCCTCAAATTGCCGCAGGCAGCAACCCTTTACTGGTTACCTTCCTGGGTGCGTTCGGCATTTTGGCGCT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCGGGCGAGAGCTCGAGTGAGGATTGAAAC # Alternate repeat : GTCGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : NA // Array 1 31847-31232 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOP01000024.1 Meiothermus taiwanensis strain A contig00024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================== ================== 31846 34 100.0 39 .................................. AGGGCAGGCAGCAAAAACAGGGGGCGGCACCTCAGCGTC 31773 34 100.0 39 .................................. CCATCCGCATGTATGCATCCAGGGGGTACGTCCGCCGTC 31700 34 100.0 37 .................................. CTCGGTGCGGCGCTACGCCGTTCACGTAGAGGTTGTC 31629 34 100.0 39 .................................. CGTGGGTGTGCTCCCGGCCCGTACCTGGTCGGTGGCGTT 31556 34 100.0 37 .................................. GGCTACGTAGCAGCAGCCCAAAGCAGCCACACCGGTT 31485 34 100.0 40 .................................. GCACGTATACGTCGCGCCCAAATATTGCCTTGCCAGCGTC 31411 34 100.0 39 .................................. ATGAGCTCACCGCTGACCGCATCACCTGGGATGAAGGTT 31338 34 100.0 39 .................................. TCGCAAGAATCCTTTTATGCGGTTTTTTACGTATGTGTT 31265 34 88.2 0 .......................CA..CA..... | ========== ====== ====== ====== ================================== ======================================== ================== 9 34 98.7 39 GCACTCGGGCGAGAGCTCGAGTGAGGATTGAAAC # Left flank : GAAACGGACCGCTGGGCCGATGAGCACGCCCGCACCCACGT # Right flank : GAATGGGGGTTAGTCCTGGTCTGTAGACTCGCCAGGGTTGGGGGCTTCCTTGCGCGGTTTGAGCAAGGGAAAGAGAATCACATCGCGGATGCTTTCTTGATTGGTGAGCACCATAGCCAGCCGGTCTATGCCCAGGCCCATCCCGGCGGCGGGGGGCATGCCGTACTCGAGGGCCAGCAGAAAATCCTCGTCAATCTCGGGCTCTTCATCGTCGCCGGCTTCGCGACGCTTGGCTTGTTCCTGGAAACGGGCGCGCTGATCGAGGGCATCGTTTAGCTCGGAGTAAATAGGGGAGAGCTCGAAGCCTGCCACAAACAGGTCGGCGCGCTCGGTGAGGTTGGGTTTGTTGGGGTCGCGGTGGCGTTTGACCAGGGGGCTGATAGCGAGGGGCACATCCACCACAAAGGTAGGCTGAATCAGGGTGTGCTCCACATAGTGCCCAAACAGCTTGTCCAGCAACTTGTAGCTGGGTACGCTGCGCAGCTCGGGGTGCTTCTGAT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCACTCGGGCGAGAGCTCGAGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : NA // Array 1 279-1473 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOP01000075.1 Meiothermus taiwanensis strain A contig00075, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 279 37 100.0 34 ..................................... CTGCGGCAAGCCTGCGAGCAGGCGGGTTGGGAGT 350 37 100.0 34 ..................................... GCCAGAGCCGCGATTGACGCCGCGCTGACCCGGA 421 37 100.0 35 ..................................... ACAGGAGCGGATGCCATCGAGATTTATTACACCCA 493 37 100.0 38 ..................................... GTGGTGCCCGACCTGGTTCAGACCCAGCAGGCCGCGCC 568 37 100.0 34 ..................................... ACGAGGCCGCCGTATAGGAGCTTTCCGTATCCGC 639 37 100.0 35 ..................................... GGCATAGTCCGCCGCCGTGGGGAAATCCTGGGCCT 711 37 100.0 34 ..................................... ATGTTGTCGCGCAGTTGCTCAAAGAGTCCCATCA 782 37 100.0 35 ..................................... AGGCCCATCTCGCCGTAGCGCTCGAGCCGCTCGGC 854 37 100.0 33 ..................................... CATCGGCGGTGCAGCGGGCTGAGAGCAGGGGGC 924 37 100.0 37 ..................................... CAAAATAAATGCCCGCTCTTCCGGCTTATACTCGTTC 998 37 100.0 35 ..................................... GTTTTGCGGCCCCCCAAAAATGGCGATGGCGAAGA 1070 37 100.0 37 ..................................... TAGGGCGGACAGCGGAGATAGTATGAAGTAGACGCGC 1144 37 100.0 37 ..................................... TTCCGCGACGGCAGCTACCACATCATCCAACTCCAAC 1218 37 100.0 38 ..................................... TGCCGCAATGCGTAATATTCACCCAACGCCGGTGGAGG 1293 37 100.0 35 ..................................... GCTGTGGCTGCCCTAAATGCCTGGGGGAAGGATGT 1365 37 100.0 35 ..................................... GCTATCGCGCTTCAGCGACACCTGCACCGCCGAAG 1437 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 17 37 100.0 35 GTCGCACTCGGGCGAGAGCTCGAGTGAGGATTGAAAC # Left flank : TTAGTTTAGAGGCTTTTATCGTATACGCCGTATGATACTATGAAGCCGAGGTATGCGCGATGGAGGCATCCTCTTTTTTGTAGCCGGTCTCACCTTTGCGCGAACCCCAAGCAGGTGGCAAAACCCGGGGGGGTTCGCGCAAAGCGAGAAAGCGGCTAGGGGACATTGAAAACCCGTTTTCCCCCCACCTTCCCCCACCCTGCGTCGGAGGCCTTTTTGAGGGGGTTCGCGCAAACGGCCTCTTGAAACCCGTCCAGCACGTACGCTAGGATGAGGCCG # Right flank : CCCTGCTCACGCCTGTTCTCGATAGCCTGGGTGGATCCAGGAGTGGCGCGACTGGCTGCTTTCCATGGGCTTTGGCCGAAGAAAAAGCGACACATCCCTGCCCGCCCAGGCTCTACCGCTTCCTGTGGGCCCTGGAAGAGCAGGTCGTCGCCCTGGAAAAGGCCCTGCCCTGGCCTTTTTCGGCAGGGGTCACTGGGCGATAGAGAACAGGCTTCATCACAAGAGGGATATCGTGCTGGGAGAGGATGCCTGTCGCACCCGCAAAGCGGCCCAGGCCCTGGCCGCTTTGCGCAACCAGCTGCTGGGCTTCCTGCACCGGCTTGACGTTCCCGTGCTGCGCAGTGTGCGTAGCTTCTCCGTCAATCCCATGCCCCTCTTTCGCTGGCTCAGTGGGTGTATGTGAGGGGTGCATACGATAAAAGCCTGTGGCTTTACGAGTGATCGCTTGCTCATCGAGCCTTTTATGTTAGACTCTGCAACTGAGCAGACCTGACATACAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCGGGCGAGAGCTCGAGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.10,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : NA // Array 1 11698-12031 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOP01000036.1 Meiothermus taiwanensis strain A contig00036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 11698 37 94.6 37 CC................................... ATGTGGGCCTTGAGCGATGCGGCCAGGGCATCCAGAG 11772 37 100.0 37 ..................................... GAGCCACAGCCGGGACAAACCCGGAAGGACGTATCCG 11846 37 100.0 37 ..................................... CCGGGGGTTGAAAGCTCGCTCTCGGTTGGCTGATAAA 11920 37 100.0 37 ..................................... TTACCACTGCCTGGATCTGCCCCCGCTCGTCCCTAAT 11994 37 91.9 0 ............................A....G..G | G [12026] ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 97.3 37 GTTGCACTCGGGCGAGAGCTCGAGTGAGGATTGAAAC # Left flank : CCATCCTGGGTCTGGTGCCGCGCATCGTGCTGGCGAGCCTGGTGGCCTACTGGGTGGGTGAGTTTGCCAACAGCTATATTCTGGCGCGGCTTAAGGTAGCCACCCAGGGGCGCTTTTTGGCCTTGCGCACCATCGGCTCTACCCTGGTAGGACAGGGCCTGGACACCGCCATCTTCCTGCTGGTGGCCTTTTATGGCATCTGGGACAACAGCCTGCTCTGGACGGTGTTTGTTTCGAACTACATCTTCAAAGTTGGCATAGAGGTGCTTTTTACACCCCTTACTTACGCCGTGGTGGGATTCCTAAAGCGCGCCGAAAACGAAGACTATTACGACCGCGACACCCGTTTCAACCCCTTTGCGTTCCGCTAAGCAACTAGCCCCGCATATCTGGTAGAATGCGCGAACCCCAAGCAGGTGCCAAAACCCAGGGGGGTTCGCGCAAGCCGAGAAATCGGCCAGGGGACATTGAAAACCCGCTTTTCCTTTACCTTCCCCCAC # Right flank : GCATGACCCTTCTAGAGGAGTTGGGCAGGTTTTTTCCGCCGGGGCGCTTGTTGCACAAGCCGGGTGAGCTGGTGCCCTACGAATCCGACGCCCTTACGGCCTTCCGGGCCCGGCCCCTGGCGGTGGTGCTGCCCGAGAGCCACGAGGAGGTGGTGCAGGCGGTGCGCTGGTGCGCCAGGCACCGGATACCCTATGTGGCCCGGGGCTCCGGCACCAGCCTTTCGGGGGGCTCGCTACCGATTGATGGCGGGCTTTTGATTGGCCTCAACAGAATGAACAAACTGCTGCGGCTGGATCCGCAGGAACGCATCGCGGTGGTGGAGCCGGGCTTTATCAACCTGCAGGTCTCGAACGCTGCCGCCCCCTACGGCCTTTACTATGCCCCCGACCCCTCCTCCCAGCCGGTCTCGACCATTGGCGGGAACCTGGCTTTTAACTCGGGCGGGGCCCACTGCCTCAAGTACGGCATGACCTCCAACCACGTGCTTGGGGCCAAGGTG # Questionable array : NO Score: 8.92 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCGGGCGAGAGCTCGAGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.10,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 1 51-447 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOP01000089.1 Meiothermus taiwanensis strain A contig00089, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 51 29 100.0 32 ............................. GCCACCCGTAGCGCGGGCGTGCTGAAAAACAT 112 29 100.0 33 ............................. GTCTGTCTCCAGGGAGCGCACAGCCGAGGCCGC 174 29 100.0 32 ............................. TGGCGAGCGTGTTGAGCGCGATTTGATACCCC 235 29 100.0 33 ............................. AGGGGGAGATCGATGAAAACCTCCCGTGGTAAC 297 29 100.0 32 ............................. TTAGTAAATCCGAATGAGATAGTGCCAGAATA 358 29 100.0 32 ............................. TTGAGCGCCCACCCCTGCTCGTTGCCCACCGC 419 29 96.6 0 ...........................G. | ========== ====== ====== ====== ============================= ================================= ================== 7 29 99.5 32 GTATTCCCCGCACCCGCGGGGATGAACCG # Left flank : CCCGCGGGGATGAACCGGAGGCCCTGGCCGCCCTGCCCGAGGAGTTCCTCG # Right flank : GAAATGAAGCCTTTGTTGGTTACGTACCTGCGCGGCTTTCAGCTAGCACCTTCTGCCACGCATCCCGGAGCCACTCCTGGGGAGTAAGCAGCCGAACTGTACTCAGCAAATCCCAGTCGTTATTTTTGCGGGCAATCTCCACCATTTGCGGCCAGAGCCGCTCAAAGTCCTCGCGGGTATAGCGGCCTTCCCGGTACAAGATGTACATTTCGTCGTACAGTTCGGATATCGGGTGGGGAGCCATAACTACCTCAAGCTGTTCAGAAACCAGTCTTCGGGTTCAACATACGCACCGCATTAAGTGCCTCGTAATCTCCGCCAGAAGCCTCGATTGGTTACAGCCAGAGCTGCTCAAACTCTTCCTATGTATAACAGCCATCGCGCCAAAACGAATAGATGGTGGTCGTTCAGGGTTGCGACGGCTGGCTTGTTAGTTGTCACGTAAACTCCCGGGCACTCCCTACATTATAGCAAACCAGGAGGGGTCGAAGCTCCTGAGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 11090-11548 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOP01000088.1 Meiothermus taiwanensis strain A contig00088, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 11090 29 100.0 32 ............................. TGCTGGCACTTGCCCCCTGGTTCTTCCTCCCC 11151 29 96.6 33 ............................A GCAAACCGTAACTTATACTGGCTCCTCGGGCAC 11213 29 100.0 33 ............................. GACAGCATTCCCGAGGTGTGCCGTACCTTGCGC 11275 29 100.0 32 ............................. CCGTTCTGCTTGATTCCTTCCTGGCCGTCCAC 11336 29 100.0 31 ............................. CGCTCCTGGCTAAAAAGCCGGGGCTGGTAGT 11396 29 100.0 34 ............................. CCCCCACCGCTTGAGCCTCAAGGTGCTGGTAGGC 11459 29 100.0 32 ............................. GGCATGCGCGAGGTGTCGCATTTCCTCCTCGC 11520 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 8 29 99.6 33 GTATTCCCCGCACCCGCGGGGATGAACCG # Left flank : TCTTCGATGCCCTCGAGACCCCCGACCCCTACGCTGCCGACCCCGCAGCACCGGGCGATCTATGGGATCCCGACGGCCCGGTTCCAGGTGGGATAGCCTATGGTAGTGATCGTCCTGGAGAAGGTACCCAAGACCCTGAGGGGTGAGCTCTCGCGCTGGATGCTCGAGGTGAGTACCGGTGTGTTTGTGGGCAGCGTTTCGGCGCTGGTGCGCGACCTGCTCTGGGAAAAGTGCGTCGCCAAAAAAACTGCTGGACGCTGCTGCCTGCTCTACCGCACCAACAACGAACAGGGCTTTGCCATCCGAACCCATGGCGACACCACCCGCACCCTCGTAGACTTTGACGGCCTGACCCTGGTGGCCGTGAAGAATGCCGAGTGGGAGCGTATGCACCAAAAGCGAAGTAGAAAAGCCAAACCAGGGGTGAATCTTGACAATCAGACTCGGGATTCTGACACTTCCGGGGGATCGAGCGGCTAGTTTTGCTGTTAGAATCAAGT # Right flank : CGTTGCAGCGTTCGTTCGGGCTCTCCGAGCGGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //