Array 1 74634-73483 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANBM01000003.1 Anaerovibrio sp. JC8 JC8_003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 74633 36 100.0 30 .................................... TATTTAAGACAGATATGAATGAAGTTTTAA 74567 36 100.0 30 .................................... TTGACAACTGCAAAGGTGGTACGTGTGAAA 74501 36 100.0 30 .................................... ACTATTAAGGCTGTACTCGCACTTATTGCA 74435 36 100.0 30 .................................... ATAAAAGGAAATCATGTAGCCCTAGTGCAG 74369 36 100.0 29 .................................... GCTCAATTTTAAAAGATATATTAGGTTAA 74304 36 100.0 30 .................................... GATGTGAAAGTGGTTGCACCAGTCTCATAG 74238 36 100.0 28 .................................... GCTTGTCGCCTTTTCTATTCATCGAAAA 74174 36 100.0 30 .................................... AAATCAGATGTTTAACATCCATATTAATTT 74108 36 100.0 29 .................................... TTTTAATGCTTCTCCGATTTCCTTAGTCA 74043 36 100.0 29 .................................... ATCGCCCGTTTGTTTATCCACTTTATAAC 73978 36 94.4 29 TG.................................. AACTCTGTAAAGCAGCGACTATTGATCCA 73913 36 100.0 30 .................................... AGCTTTCCGCTGTTATTGATTATAGTGACA 73847 36 100.0 30 .................................... TTGCAAGTATATCCAGCGGATAACTCTTTA 73781 36 100.0 30 .................................... GAAAGCAGAAAATGAAATACCCTTATTTTA 73715 36 100.0 29 .................................... TTAAAAACAGCACTTGCTGACTGTTCATG 73650 36 100.0 30 .................................... CAAAAGGTCGCGCATAGCCCCACCATGGAA 73584 36 100.0 30 .................................... AATGGAGATTAAACTAACGGAAGTCGATGC 73518 36 94.4 0 ................................GC.. | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 99.4 30 GTTTTAGTTCTATGTTGGATATTGATAAACTGATAC # Left flank : TAAGTTATCATTGGTGGGGCTATGTAATACAGAGGTGTTGATTAATAAAAAGAAGATGCGCCTATATAATGCTGTTGATAAATGCGTAGCCAGCTTTACCAGTGCCATAATTGACAACTCTGTTGAACGGCTGTTGTTACCAGATTTAAAAAAATATGGAAAATAGATATATGCGACTGATTGTGATGTTTGATTTGCCGACAAATACATCAGAGGATAGAAAGAATTATACTCAATTTAGAAAAAGCTTAATAAAGCTGGGTTTTGATATGATTCAGTATTCTGTGTATTCACGGATAACCAAGAATAATGATGACTCTAAGAAATATTGTCGGGAAGTAAAAAGAATCATTCCACCTTGTGGTTCGGTGCGATTATTGCAAATAACGGAAAAACAATATACTAAAATGCAGATTCTGCTAGGTGAGAAAACACCTACAGAAAATCTGCTGGATGATAAGGATATAATGCTTATCTAAGTGTGATATAATCAATTTAAG # Right flank : TAACAGTAGCGAGGATATGCTGCAAAAAATAGGGAAAAATCTAATAATAAGGGGAGCAATATGGAACTAATAGCAATTCAGGAACCGTTGACAGTTTGTAAGGTACCGGATATGTCAGAAGTTGATTTAACAAAGGAGTTTTTCTTTTTATCTAAAACTAAGGACGAAATATCATTGGTGTGCAGGACAGAGGATGCACCTCAAAAGTGTAGCGCAAGGGAAGATAATTGGAGAGGCTTTTACATCAATGGGATATTAGAGTTTTCCATGGTTGGAATACTGGCCAAGCTTTCAAATTTACTGGCTGATAATGGTATCAGTATTTATGCCGTATCAACTTATAATACAGATTATATTCTGATGAAGGCTGAACAATGGGACAATACGAGGTCAGTTCTGTTAAAGTCGGGGTATAGTTTCAAATAAAATGAAGCTATCTTATGGGAAAAAATATTCAAATGCGTTATAATGAAACAAATATATGGGTCGCTTAAAGGCGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTCTATGTTGGATATTGATAAACTGATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 242541-242000 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANBM01000005.1 Anaerovibrio sp. JC8 JC8_005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 242540 35 100.0 35 ................................... TAAGCGAAAATTGGGATAATTCTACCAACCATTCA 242470 35 100.0 38 ................................... ATGCCATGCAGAATAGCATGTGGGTCACGGTCATCGAA 242397 35 100.0 38 ................................... TGTTTTGGGGCTTTCTTTCGCTTATCAGGGATTACCTC 242324 35 94.3 38 .......A...T....................... TGACCCTCAAACTCAATTATTGGTGAACCAGTAGTTAC 242251 35 94.3 40 .......A...T....................... TAGAAAGCTTCCTTATCTTCCTTTGTGCCATAGATGGCAA 242176 35 94.3 36 ..........T..........C............. TTCATACCCATAACTACTACCTTGCCTGTTGTTTTA 242105 35 97.1 37 .....................C............. ATTTCTGAAGGCTTTGCATTGACATAATAATTAATAA 242033 34 91.4 0 .....................C.......C-.... | ========== ====== ====== ====== =================================== ======================================== ================== 8 35 96.4 38 TTGCGCAGGGCAAATGCCGCTTGCGGCATTGAAAC # Left flank : CTGAGCCTCTTGATGTGGCTGAGTGCAAGGCCATGGCTGAAAAGGTAGTACCGTGGAAGTGGAAGGGGAATACAGAGCGGCTCAGATATAATAAAAATATCGCTGTTACTGGGTTTGTGGGGGAATTTACCTATTCACTGTATAATCTTGATGATGAACAAAAAAAGATATTTTACAGATTAGCATATTTTGCCCAGTTTGCTGGGGTTGGACGCATGACCGCCCAGGGAATGGGTCAGACCCGATTATGTAGTGTTGCAGAAGGACTATAATTATTCTATAATAAGGAAGACGATGGCGAAGAAACCCAGCAAAATGAAAATCTGAATTAAGGATTTTCGTGGACTAAAGGATGGCTTTTGTTGCTTACTGCATAGCGGTTTTTGGGATAAAAGTGCAACAAGTGTCCACGGGCGTTTTGGAACATTTTGCTGAAAATCGCCTTCTGTGTTATTTTTTCATTTTCAGCCCACTGTTTTCAATGGTTTCAGAGGACAGTA # Right flank : ATTATATTGCACACTAAAAAAACTACATCCGTGAAAGGCTGTAGTTCTTTTAGTTTAAGTTTATGATTTGGGGAGGAGTGTAGAAATATGAATAAGGATTTAATGGGTGTAGGTAAATGTATTATGTGGGTAATGTGTTTTACATTTTTGCTGGTTTTTCATGCTTCAATAAGCCATGCGTCACAGTTCGTGGAAAAGAAACCTGTATATGAAGATGAATGGTTGGTAGAAGTCCGTCAAAAGGTAGCGGAAAATCAGGATTATATGGAGATATATCGCGGTAGTACACAGGGCAATAAGGCGGAAGAATTAATAGATGGAACTATTATGTATAGCGATTCTACATCCTGTTTCATCATTGAACAAAAGGATAATCATTATGTGCTAAAAATCAAAGATATACAGCTAAAAAAATATAAATATGAAGCACCCCAGGAAAAGCCTTATTCCAATGTTCTTGAATTTGATATGGCTGAATTGAAGGAAAAGCCTCATTCCCA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:0, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGCGCAGGGCAAATGCCGCTTGCGGCATTGAAAC # Alternate repeat : TTGCGCAAGGCTAATGCCGCTTGCGGCATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.70,-8.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 253481-253154 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANBM01000005.1 Anaerovibrio sp. JC8 JC8_005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 253480 36 100.0 36 .................................... TACCGTAAAAATGGACGAACCTTTATGTCTTTCGGG 253408 36 100.0 36 .................................... GCACTACCCTCTGTTATCTTGTCTTCCGACTTATAA 253336 36 100.0 34 .................................... TCAACCAAAGCCTTGTATTGAGAAGCGATATTAA 253266 36 100.0 37 .................................... AACTTTTGCTCGTTTTCACAAGCTTCAAGAATAAGGT 253193 36 97.2 0 ...............................T.... | CT,TT [253158,253164] ========== ====== ====== ====== ==================================== ===================================== ================== 5 36 99.4 36 ATTGCGCAGGGCTAATGCCGCTTGCGGCATTGAAAC # Left flank : TTTGCGCCTAATGACTTTGAATATGATGAAGATGACGGCTGTAGGATGACTGACAAGGCCAGGAAAAGATGGATTCAAAATTATGAAGAATATATAACCAAGGAGCGTAAATTGCTGGATGGCTTATCCTGGCGCAGATATATTTTTAGAGAAATTGAGCAATTTGCTGACACTGTAGGAAAAATCCAGATTGTTGCGTAATGAATATAGGATAAACTATAAGTGGCACGTCAATGGTGGCGTGTCACTTTTAATGTTGCAGATGGAATATAATTGTCCTATAATAAAGTGAATAGAGGCGAAGAAGCCCAGTAAATTGAAAATCTGAATTATGTATTTTCGTGGACTAAAGGATGGCTTTTATTGTTTACTGCATAGCGGTTTTTTGGATAGAAGTGTAACAAGTGTCCACGGGCGTTTTGGGACATTTTGCTGAAAATCGCCTTCTGTGTTATTTTTTCATTTTCAGCCCATTGTTTTCAACGGTTTCAGAGGACAGT # Right flank : AAAAAAGTGTTAGATACTAAAATTGGTATCTAACACTTTTTTTATTTACATATTTATATAGGCCTAAATACTTATTAAGCAGGAAAAAAAGTTTTTTTATCGAAGTAGTAAGGCGTGAGCGGATTTGTGATAATGGAGGATCTTTTATATGAATGTCGATATAGAATTTTTTAGCGATGACCCTATGGATAATGTATTGGCCTGTACAAAATTCCAGTTTGATAAGGTCATCTTTTTAGGTTATGCCGAAGAAGATATGGATCGGGCAGCCAAAAGCACTGTGGCGGCGTTCCTAAAAAAAGAAGAAATTGGAGTAAAAGAGTTAGAGTTTGTTCCTTTGCCGGAGGGGCGGCTTGATGATATTGAAAAAAAGCTGGTTCAAATAGTCGAGAAAGAAAAGGATTTAGGCAATCAATGTTTTTTTGACCTTACTGGTGGAGAAGAACTTGTATTGGCCGCAGCGGGGATGGTGGCTGACGAAAAGAATCTTCCCATGCATG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCGCAGGGCTAATGCCGCTTGCGGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.00,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA //