Array 1 111622-111989 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTEM01000006.1 Bacillus altitudinis strain CH156_5T scaffold6.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 111622 32 100.0 36 ................................ TAGTTTGTTCCGCAGGCACAATTGTTACTGTATTGC 111690 32 100.0 34 ................................ GCTCTCCAATCAACGGTAGATGCGCCTGCATAAT 111756 32 100.0 35 ................................ ACTACGGCCATTTTAACGCCCTTTGGTGTAGGGCT 111823 32 96.9 34 ......................A......... TACTTTTGCCTTTACCTCTACTTCCACCGGAAAA 111889 32 100.0 33 ................................ GATTTCTTCGTCTGTTAAATCTTCATAGTATTT 111954 32 84.4 0 .......C...T............T..TC... | A,G,CA [111963,111971,111977] ========== ====== ====== ====== ================================ ==================================== ================== 6 32 96.9 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAAGAAATAGCCGACCGGCTAGGCGAAACGAGACAAAACATCTCAAACATCCACAAAAAAGCACTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCATGCAAGAAGACAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAGTAGACAGGCTGATTTACCAAGAAGGACCTGGCTTTTGGGAGTTTATTGTGGAATATATGACGAAGTTGTAAGAGGAACTGATGGTGCGAATGTCAGGTGAACATAAAATCCCCGGGACATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTTCATAAAGGGGAAAACAAAATTCTGTATTGAAAGTTGTGGATTTTGCCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : TGATTGTGTCTTAAACGGTTATGACTAACTTAAAGATCATCTTCTTACAACATCCTCTTTCAAATAGCCATCAAATATACTGTTCATTTGTACAGTGAAAACATGACTCCTTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTCATTTAGATTCAAATTTTATCCATTCGTAGTGAATGATGAAGGAGGAATTGTTTTGGGTGAAACGGAGCGAACCGGTAAAGTGGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCCGAAGAAGTCGACTTTGCTTCTAATCATGGCGGGCTGACAGGAGATTCTAGAGAAGTGATGTGGTTGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCATTAGCACAAGGTGTCATCATTATTGACTCAGAAGGAAATCATTCTAACGAAGTCGATATTGCCGTTTTTGATGAGCAG # Questionable array : NO Score: 9.03 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 119638-119998 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTEM01000006.1 Bacillus altitudinis strain CH156_5T scaffold6.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 119638 32 100.0 34 ................................ TTGACGCTTGTCTTATTGTTAATGGCAATACGAC 119704 32 100.0 34 ................................ CTACTGGTAACTCTGTAGTCGTCACTACGTCATT 119770 32 100.0 33 ................................ TGATGTAATGGCCAGTCTCTCATCAGGATTATC 119835 32 96.9 33 ...........C.................... AACCATTCCGCAAGCTCTTTAGTTGCACGCTTG 119900 32 96.9 34 ...........C.................... CTATCTGATCCAATTCTATTTTCACGTGTTTCAG 119966 32 87.5 0 ...........C.......GA......A.... | T [119995] ========== ====== ====== ====== ================================ ================================== ================== 6 32 96.9 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GCCTGAGACAGTAAAGGAAGCATTCAAAGTAGATGTGATGACACCACATCATTCAGACTACAACAGCGTCAAGCTAGATAAGATAAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCTATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTGAAAACAAAAAAGAATCGACCAGAAGAATCGGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGCGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCGGGTTATGGAAGACTTAAAATGGACGACGTCATTTCGTAAGCCATGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTTATTCGACAAAGATGGGGAAAAATGTATATTTTTTAAGGGTGAAAACAAAATTCTATATAGAAACTTAAGGGTTTTGACGATTATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TTGTGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAATAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCTTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTTAAGGGTGAAAACAAAATTCTATATAGAAACTTGTGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATATTGATTCTCTATGTTCTGGTATTTCAATGGCGTCGCACTCTACATGAGTGTGTAGATTAATAATTGTGAAAAACATAACTCTGCCTCTCAGTAGTCATGTATTTAATTAAATTCAAAGTTGTTGCTGAAATAATAAATATGATTATCAAGATTCAAATAGATTTCAGACTAGAA # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //