Array 1 59463-56132 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVTU010000007.1 Acinetobacter sp. S40 NODE_7_length_166213_cov_79.271344, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 59462 28 100.0 32 ............................ ATGTCATCAGACATGATTGCGCCCGCATTTTT 59402 28 100.0 32 ............................ CTGCATATCAAACGCATCAGTAGCATCTTCTG 59342 28 100.0 32 ............................ TCATAAGCCTCGGTGTCTGCCTCTAGGTCTTT 59282 28 100.0 32 ............................ AATATTGGTGCTGAAAAGCTTGGTACAGCACA 59222 28 100.0 33 ............................ AAAATCAGCGCACCATTGATATCTGGGAGTAAA 59161 28 100.0 32 ............................ GACTGGGTGCGTGGTATGCACGTTATTGCTGC 59101 28 100.0 32 ............................ GCTACAGATAAAGCTACACCGCCAATGCCCTT 59041 28 100.0 32 ............................ AATCGTTGTCGCTCTAGGTTCATTACATGCAC 58981 28 100.0 32 ............................ AAAATGACTCCAGAGCAGTACTACAAATATCT 58921 28 100.0 32 ............................ AGATAACGAGGGATAAGCAGCACATGCTTCAG 58861 28 100.0 32 ............................ TGCATTTGCTGCTGTTGATCTTGGAATTGATG 58801 28 100.0 32 ............................ TAACGCTATGCTTAATCTTTTTAGATGTTGTA 58741 28 100.0 32 ............................ AGTTCCAGAACCGTCACCGTCGTCACCTCCGT 58681 28 100.0 32 ............................ ATAATTTAATCAAAATCAAAAATAATACCATA 58621 28 100.0 33 ............................ AATTTATCAAAGATATCGTAAAGCATTGGAATA 58560 28 100.0 32 ............................ AACATTGTAAAATTACCATTATGATCAAATTT 58500 28 100.0 32 ............................ TATCAATTCCGTCAATTTTTGTTCCTTGTTGG 58440 28 100.0 32 ............................ TATGTTAGGACTTCTTGGGATGTTTGGTCTTG 58380 28 100.0 32 ............................ GTTGCATGACAAAGTTATGCAGGAGATTAAAA 58320 28 100.0 32 ............................ CTATTCACCAACAAAACCCAATCGCCTGTTAT 58260 28 100.0 32 ............................ GTACTGCACCGCACCGCAGCACATTTTTTAAT 58200 28 100.0 32 ............................ GCACCGCAGCACATTTTTTAATCTTTTTTGAG 58140 28 100.0 32 ............................ ATTGGCATGTTGTCCATTTCTCAGTGTAATCA 58080 28 100.0 33 ............................ TTATGCAATTGAAAAAATTTCAGCAGGCTTCCC 58019 28 100.0 32 ............................ TAGATAGGGCTTATGGCCATCTGCATGAATTT 57959 28 100.0 32 ............................ GATGGTATTTGCCATAAATGCCACCCATGACT 57899 28 100.0 32 ............................ GTCTAGATTTGGCAGGCTGGGGCCGTTTGCGT 57839 28 100.0 32 ............................ AGATAGTGAGGTGACTATCCTTGTTTCAGACA 57779 28 100.0 32 ............................ ACGAATTGCGGATTTATTAAGCTTGACAAAAT 57719 28 100.0 32 ............................ TCATCAATTAGTGCAACTAAACCAACTTTAGC 57659 28 100.0 32 ............................ ATATCTGCAAAGATGAAGTCGTATTTCGCAAG 57599 28 100.0 32 ............................ AATATGATCAAATACTCTAGTGCCGCCACTTC 57539 28 100.0 32 ............................ ATATAAATCATTAATTAACCCCGACACTGGTA 57479 28 100.0 32 ............................ ATTAGATAGCTCCTGTTTTCATGTTGTTTATT 57419 28 100.0 32 ............................ ACTGGAGAGTTATTAGCTAAAGAATGCAGCTT 57359 28 100.0 32 ............................ ATTGAGATAAAGGAATAACCATAGATCCATAT 57299 28 100.0 32 ............................ AGAAAAGCTAATTACTTTATTCATCGATCACC 57239 28 100.0 32 ............................ TTATTATTTCGGTTTTGTCGTGCTAAATAGTC 57179 28 100.0 32 ............................ GATACTTGGTGTTGACATGGGAGATGCTAAAA 57119 28 100.0 32 ............................ GAATCAACCGCAATACACGGCAACGGCTCAAC 57059 28 100.0 32 ............................ GAACTGGTGACGTGTAATTGAAACGGCTTTTT 56999 28 100.0 32 ............................ TCTGTCGTGCCTGCTTAGGGATAAGGTTCTAA 56939 28 100.0 32 ............................ ATCAATAGAAGCAAAAGCTACATAACAGAAAG 56879 28 100.0 32 ............................ TGACAAATATGACTGTGAAATTCGAGTTCAGA 56819 28 100.0 32 ............................ TTTGGCTGCCAAAGGTATCAAAGCGATTCGTT 56759 28 100.0 32 ............................ TGTATGTCGATGTACTTCCAAGTCTTTAACAC 56699 28 100.0 32 ............................ AGTTCCTGAACCTGTTCCTGATCCATCACCAT 56639 28 100.0 32 ............................ TGATGACAATTGGCAACGTGCGGAAGTCGAAT 56579 28 100.0 32 ............................ TTATTGTCTTGATAGAAATGCGAAATTTTATC 56519 28 100.0 32 ............................ TAATACTGAAACACCTGAAATTGTTGATCCTA 56459 28 100.0 32 ............................ GTGCTCTGATCTTTAAAATGCATCTTGCAAAG 56399 28 100.0 32 ............................ ATCATCGGTTAGTACGATTTGAGCTTCTACGA 56339 28 100.0 32 ............................ TACAAATGCTGCATATTATGCGGGTAAGTGTT 56279 28 100.0 32 ............................ TTTTCAGGAACATGCACTTTATGCGATTCCGT 56219 28 100.0 32 ............................ AACTGGAGAGGCTTACCATCTCCAGTGGTTTT 56159 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 56 28 100.0 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : TAGAGAGCTGGCTAGAACGATTGGTTGATTATGTGCATATTAAAAGACTAAGTGAAGTTCCAAAAGATATTAAAAGTTATGCATATTATTACCGTGTGAATCCGAAAATGGATTTAGATACACGAATTGCTCATCAAGCACGACGCCGTAATATTTCTTTAAGTGAAGCAAAACAACATTTTAAGGAATATGTTGATCAGCCTGTGACTGAGCCTTATGTGAGTTTAAAAAGTCTCAGTGCTAAACGAGAGGAAAATATAGATCGATTTTATAGGTTATACATTGGTAAATCTTTTGCTGATGAAGCAAAAGCTGGAAAATTTGGAACATATGGATTAAGCCGAATGGCAGCAGTTCCAGAGTTTTAACCCAATATTTTTTCTACTCTTTAACAGTTTAATAAAATCAATAAGTTACAGTAGGTCGTTTTTTGATTGGGTAAATTGCCTGAATCTAAGATAAACGCCTGTTGTAACTTGTTTTTTTGCTTTATTATTACT # Right flank : TGCTGTTAACGTTACATTAATCGCTTCTGGCAGTTCAAGGTAGAATATATATCGGGAGATTTATTTTTAAAATTTTGATTGTACAGAGTTGCCATTTTAGGATTAAATTATTTAATGAATATAAAATAATTTATGATCAAATAAATTATATATTCAATAAAAAAACGCACTGCTTCTGACGAAACAATGCGTTTTTTAATAACATTATGCAGGCAAATCAAACCAGATCATTTCACTATCTTCAAGGGCATTAATCGTTGTTTTCTCATCAAACAATAAAGCATCTCCTGCTTTAACAATTTGATTTTCAATCATAATTTGACCTTTCACCACATGTACATAATTGTGTTTCAAGGTTGCCTCGATTTCCAGTGTTTTACCCGCTTCCAATACAGCAGCTTTAACTTCCGCATTTTGGCGAATAAACATAGGAGCATTATCATTAGGTCCAACAATCAAATGCCATTCATTGGGCGCTTGGTGCGGATCAAGGTTAATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 175790-176357 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVTU010000003.1 Acinetobacter sp. S40 NODE_3_length_481743_cov_70.746427, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 175790 28 96.4 32 ..................C......... TGACGCTCTGCTTTGCTTAGTGGCTCGCTGAA 175850 28 96.4 32 ..................C......... AACAAGTTATTTCAAATGCAGAATCGGGCAAT 175910 28 96.4 32 ..................C......... CTGTAAAATCCCAGTCGAAGATCATCTTTGCT 175970 28 100.0 32 ............................ TATAAAAATATAACCAAGAATAGAGAGAACAA 176030 28 100.0 32 ............................ ACTACCGGCATACGTGAATTAAAAAAGTTCTG 176090 28 100.0 32 ............................ CCGGCCATTATTCGCCGTGAAACAGGGAACCA 176150 28 100.0 32 ............................ ATAATAAGCATTCATAAATCGTTCTCGCCACC 176210 28 100.0 32 ............................ ATCCTCCAAGCGGCTACCCCATCCATAACCAA 176270 28 100.0 32 ............................ AGTTAATGCTTAAGTTGTGGTTTAGAGATGGT 176330 28 89.3 0 ........................TTT. | ========== ====== ====== ====== ============================ ================================ ================== 10 28 97.8 32 CTTTACTACCGCATAGGTAGCTTAGAAA # Left flank : TTTAGGATTGTATCGCCGCTTAATTTTCCACTGGCGATGGGAGTGAGAACACCGATAGTTAAGATAATAATGCCGATATTTAAACCGTGTTGTTGCAAATAAGGGAAAAATTGATTGAGTGGAGTCAATTTGAAAAAGATGAGAACACCAGCGGCAATAGTGACTGCGGCATTTTGACTGAAGATACCACAAGCCAATAAAACGAGTAAAACCAACAGATTGACATCAAGCTGGGACATGATCATGGTAATAAAAGCGTGTATGTAGGGAGTGCTGTATTGTATAACGTTTTTTTATTTTACCAATGGTTGAAAAATATCATTTTTCTTTTTAAATATTTATAATGAAGAACTATATTAGCTTTAGATACCTAAATATAGTTAGACTCTTTAATAACTGAATAAATTCAATATATTAGATTTTGGTTGAAAAACTTTGGGTAAAACGCTGTTTTATAGCTAACTTGTTGTTGGATAATTTATTTTTTATGCTAACTTACT # Right flank : ATATCCGAAATGAATATCTACAAGATGTTTTATTCAAGGTGTTAAATTCATAAAATCGGTTAAACTATCGTATCGATTAATTTGGATGTTGTTATGCTCTTGGAAAAAATGTTGCAGTCACAAGGGTTTGGTTCCCGTAAACACTGTCAGCAACTGATTAAAAATGGAGCAATAACAGTTCAGGGCGAGGTACAAACAGATTTAAAATTTCGTGTTGATGTGAAAAATCTAAATTTTTCAGTATTTGGTCAAAGTTATGTTTATCGCGAAAAAATCTATATCGCCCTCAATAAACCGCAGGGTTTTGAATGTTCACATCATCCGCAGCATCATCAGAGTGTATTCGATTTGTTCCCTGACATTTTAAGAGAACGTGGACTGGCGGCAGTAGGGCGGCTAGACCAAGATACAACTGGATTATTATTACTCACCGATGACGGCAAATTTTTACATGCGCTTACTCATCCCAAACGACATGTTCCAAAAGTTTATCATGTCAC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : CTTTACTACCGCATAGGTCGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 292367-292039 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVTU010000003.1 Acinetobacter sp. S40 NODE_3_length_481743_cov_70.746427, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 292366 28 100.0 32 ............................ ATTGCCTCCAGACTGCGACTGGAGAAAAACGC 292306 28 100.0 32 ............................ ATTGGTTAGGTTATCAACCTGTATTTTTAGCG 292246 28 100.0 32 ............................ TGCCTGATGTAAGTTGGCGCGGAGCATGGTGT 292186 28 100.0 32 ............................ ATCCCCCAAACTTACGACGCTATTTTCCTCAA 292126 28 100.0 32 ............................ GTTTTGGTTATCTGACGGCTCTCAGTCTAATA 292066 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GATTCCTATCGCATAGATAGTTTAGAAA # Left flank : CTTAGAAACTCAGCTTTTTCACTAGGTAACAGTTTGGCCTCCAAAATTTCGGCATCTGCAGCCCATTCAAGCGAAAGAGTTTGTAAAACCAGTGCTGAACTTTCTGCAAAATAGTCTTCGGTTCCCTGACCTAAATGAGCATCATATTGACGTAATGCAGTGACACCAAAACGAATAAAATCACGAATCGTTGTTAAGTTCTCTGCTGCTTCCTGCAAATGTTCAGGGCTAATAGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGTTGATGCAAAACGACTTATGATACCTTGTTTTGTTGTGGTTTTTAATGCCTAAACGTAATGGGTTCAATTTTAAATGAATTTGACTTTTAGTACGTTTTAACCGAATATTTTTATAACTCTTTAACAATTTAATAAAATCATAAACTTATGAATTACTTTCATTTCTTTGGTTGAAAAGATTTTTAGTCATGAAGTCGTTGTTATTGTTTAGTTTATGACTATATTTTTATG # Right flank : GACGCGACCAGATTTGCTGCGATATATTTAGTGGTGTGTGGAAGATGAAAAAAGTCCTGACGGAAAAATTAAGATTCTAATTAAAAAATGAAATTACGAAATACCATGTGCGCCAGTATATTCGGATTAAATATGACCCCAAACATCTAAGAAATATTAAAATATTATAGTCATGTAAATAATGAAACTAGACACCATTACAAGCAACAGATATTCAAGTTTAAATGCTCAAAGCCCTCCAAATGTAATAGCATATCATTCTCCTATTGTATTTTTTAAAATTCGCTTTATAACATCTTCAATATATAAAATATTTTACTGATTCATCTTGTATGAATCTTTTAAATCCAGGTTATTTTGGATTGGTTTTCTGTCAAAATAGTAAGTAAATTCTTTAAAGTTTTAATTTTATGAATCCTTATATTCAAAGTGTCGAATTATCCAAGGCCTATCGCTTACTCAATCATGGACCAACTGTTTTGGTCTCAGCCCAAACTGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCCTATCGCATAGATAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GCTTCCTATCGCATAGATAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //