Array 1 1915746-1917762 **** Predicted by CRISPRDetect 2.4 *** >NC_015976.1 Sphingobium sp. SYK-6, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1915746 32 100.0 34 ................................ ATGTTGTGGAACGCGATGCTGTCGTCATCCCATG 1915812 32 100.0 34 ................................ CGTTTCCGCCTCGCGTGTAGGGAGGGATCAGCTT 1915878 32 100.0 34 ................................ CCGCCCAACCCGGCGCCACATATCACGGCATGGC 1915944 32 100.0 34 ................................ CAAACTTCGATGCCTAATTCTCAATCTCGCCCCG 1916010 32 100.0 33 ................................ CTGAGCCAGTCAGGCAAGCCGCCGAACCAGGAC 1916075 32 100.0 34 ................................ TTCCAGCGGCTGAACGTCGTGGGATGGACCCCCG 1916141 32 100.0 34 ................................ GCCGGCGAGATCGACGTCGCCACCATGCGATCCG 1916207 32 100.0 33 ................................ ACGCGGCAGACCATGTTGGGGATGTCGATGTAG 1916272 32 100.0 34 ................................ CGCGAGACTAGCCCGGCTTTGGTCGTCATCGAAG 1916338 32 100.0 34 ................................ TGGTTGAACAGATTGTCGCGCGCCTGCGCCCCAG 1916404 32 100.0 34 ................................ AACGGCACGACCGGCAATGCGACCACCAGCGGCT 1916470 32 100.0 35 ................................ AAGCCGTGGAACGCGAAGCGGCAAGGAGACGGGCC 1916537 32 96.9 36 ................A............... TACGCAGAAGAACATCGGGTGAAAGCAGCCAAGGCT 1916605 32 100.0 34 ................................ GTGTCGCTTGCTGCGCCAGCTCCGACGCCATTGA 1916671 32 100.0 35 ................................ GATGATGGCGGCAAGGAAGTGCAGGCACGGTGGAA 1916738 32 100.0 35 ................................ CAGTCACTGCACGGCTCGCTCGTCCAGTCCTCCAG 1916805 32 100.0 34 ................................ TTCGACCAGATAGCTGTCGCCACGTCCAGATCGA 1916871 32 100.0 33 ................................ GCCGTGCCAGCGGGCCATGCTGCCCGGATAAGG 1916936 32 100.0 35 ................................ GTTGATTTCGGTGACCTTGATGCCATGGACGATGG 1917003 32 100.0 33 ................................ GCGTTCGGCACGGCGATAGTCGCGGTCCGCCTC 1917068 31 96.9 34 ......-......................... AAGCAGGAGCATCTGCGCCGCTGGCACGCGAAGG 1917133 32 100.0 36 ................................ GTCGCGTCATAGGTCGATGCGGTGCCGGTCAGAGAG 1917201 32 100.0 34 ................................ CGTCTTGATCCCAAGGACGTGCGCCTTGCGCAGA 1917267 32 100.0 35 ................................ TACAAGGATTTCTCGATCGACATGCAGCTCGGCAC 1917334 32 100.0 33 ................................ TGAACCCGTGGGGATGGTCCCCCCGTCCGCGAA 1917399 32 100.0 33 ................................ GGTGCGGCTTATACCAGTGATACGCCGCTGGGC 1917464 32 100.0 34 ................................ AACGACATCACGGCGACATCGGGCGTCTTCGACA 1917530 32 100.0 36 ................................ CGGGAATACGAGGCGCACCACGAGGCCCAGGCAGAG 1917598 32 96.9 33 .................C.............. CCCTCCGAGCCGGTGGGATATCGCTCCGGGAAC 1917663 32 96.9 36 ..........................T..... AGCCGCACTGCGATATATTCGGCGCCACCCTCGGCG 1917731 32 90.6 0 ........................T.T..G.. | ========== ====== ====== ====== ================================ ==================================== ================== 31 32 99.3 34 GTCGCTCCCCGTGCGGGGGCGTGGATCGAAAC # Left flank : TGTGGAAATGACCCGATGCTGATGTTGATTACCTATGATGTGCACACTCAGGACGCGGCCGGTCGGCGTCGGCTGCGGCGAGTGGCCAAGACATGTTTGGACTTGGGACAACGGGTGCAGAATTCGGTATTCGAGTGCGAGGTTGACCCTGCACAATGGGCTCTGCTTCGGGTTGCCTTAGTCAAGGAGATCGACCCGAGGAAAGATTCGCTGCGTTTTTATCGGCTCGGTGCCGATGGCAAGCGGAGGGTGGAGCATGTCGGCGCCAAGCCCATACTTGACCTAGATGGCCCCCTGCTATTCTGAACAGCGACACCGAGCGCCGCGCGAACCCCAGTCTGTTGGACAAACAGTGGTAGGTTCGCGCGAAATATTTCGTCGTGTTTCCAGAAGGGTGGCAGATAAGCCGCCCACGTCACCCGATCGGAGTGCTGCAGAAGAAGGCGTCCGCGCCACCGCCAAGATTTACTGCTCTTTCTCATCGTATTAGCCAAGTGGCC # Right flank : CGCGTGACACCTTACCATGCGACCGCGGTTCCTGCGTCTCGCGAACGCCCCGCAGCCAACCCCTTAATGCGCGGCAAGCTTCGATAGGCGCTTCACGCCGGGAAGGTCGGTTACAGGGCGAGCGCTCCCTAGGCCCGGTCGCTTGCACCCGAACCGAAAAACGTTAGTTCCGGCCGAAGCGGCCATCCGCGCAAGTTCATACTCGACGATAATTGGCCGGTTGAAGCGAAGAGCGTTCCATTATCAGGCATCCCAAATCGACGCCGGCACACTCTGGGATCATAGTTCAGGCACGGTAATCGTCGCGGATGGATAACTCTGTTGTTGTCTGCAGAAGGTGCGCCGCTTGCTCTTCAACTGATAGATCCAAGTAGCGAGCCGGAGAACACCGCGCTAACATTCTCCTTCATCTGAATGATCCCGCGCGGGGCGCCGATTCAATCGCACAAAGGATGTATCGCATGGAAGATTCTGATCGCGGCCTGACCTTCTTTGACGGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.40,-7.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //