Array 1 375595-374371 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEHY01000004.1 Pseudomonas sp. R26(2017) R26_8_length_385290_cov_11.6752_ID_8801, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================= ================== 375594 28 100.0 32 ............................ AAAGCCTACCGGCATGTCTCAAGGATGGAACC 375534 28 96.4 32 .................T.......... TTTACGGACAGCCCGTGCTGATAGGCCCCCCA 375474 28 100.0 33 ............................ AGGATGGCGCGCACCATCGGCGCCGAGAACAGT 375413 28 100.0 32 ............................ CATTCGACAAAGTGCCCGAGAAGCGCATGGCG 375353 28 100.0 32 ............................ TCGGCCAGCTCGAGAGGGGAGAGCTTTTCGTT 375293 28 100.0 32 ............................ GAACTGGCTGATGCCAGGCAGGGGGTAGACCA 375233 28 100.0 32 ............................ TGTTGGCCCCGGTCTTTTTTCCGGAGACACAA 375173 28 100.0 32 ............................ GGCGCTTGGCTGTTCATGGCGTTGGCCCCCTG 375113 28 100.0 32 ............................ AACTTATTCCCTCCTGCAACTTGCCCCATCAT 375053 28 100.0 32 ............................ ACAGGCACCCTACGCAACTACTTCGGCGACCT 374993 28 100.0 32 ............................ GTCAACAGCACCAGCCAATATGGCTCAACAAG 374933 28 100.0 32 ............................ ACAACTCCCGCAAGCGGAACCGAGAGTGCGAC 374873 28 100.0 32 ............................ TGAAACAGTCGGCTAACAGCGCCAGGACATAG 374813 28 100.0 32 ............................ TTGAAGTGAGCGGCTGGGCGCTACGCCTGCTC 374753 28 96.4 32 ............C............... ACGGCCATCGGCTGCCCGGAGGAACCTCATGA 374693 28 100.0 32 ............................ TTGCCGGCAGCACGCAGGGCCAGGATGCCGCG 374633 28 92.9 32 ..........C.......G......... ATAAAATTCCTACAGGTCCGCAATCCGGTGTA 374573 28 96.4 32 ...............A............ AGGAGTACTTGCTGCTTTGGAGGTTTGGCCAT 374513 28 92.9 87 ...........C.C.............. CCAGTCCTTCAGCGTCCATCGGTGCTGTTCATCTCGATTGCCGAACAGGCAGGCAAAACACAATCCATCATCAATCCATCGGCACCC 374398 27 85.7 0 ...-.........G........T...G. | G [374376] ========== ====== ====== ====== ============================ ======================================================================================= ================== 20 28 98.0 35 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GGCCCTGGGCCAGTTGCTGGCCATCGATTGGCTGGCCGGCATGCGTGACCATGTACAGATCGGCCAGCCCTGCTCGGTGCCGACGCCGGTGCAGCATCGCCATGTCAGCCGGGTACAGGTCGATAGCAGCCCGGCACGCCTGCGTCGCCGCCTGATCAAGCGCCATGGGTTGACCGAGGACCAAGCCCGCCAGCGCCTGCCCGACAGCGCGGCGAAACGTTGCGACCTGCCGTTCGCGGTAATGCGCAGCCATACCAGCCATCAGCTGTTCAACCTGTTCATCCGCCACGGCCCGCTGCTTGAACAACCACAGCCCGGCACGTTCAACGGCTATGGCCTGAGCTCCAGTGCGACAGTGCCCTGGTTCTGACCCTTTTTTCCGGGTGCCGTGGAGCGCTTCGTAAAATCAATGACTTACAAAGCGCTTCAGAAAAAGGGTGTGCAGCAACCTTTAACGGTCTTTCTTTTGAAATTCAGGAGGTTATAGAGAAAGTGCTCTA # Right flank : CTTGATGCACTAATCGCTGGCTGGCCTGGGGCTCCCGGGCCAGGCGCGTCTTTGTCACATCCCCTTCATCGGCGCTGGCTAAGGTGGCCTCTTTTGACCATGTCAGGGAGTCACCATGAGCGAGTTCAACCTCGGCCGTCGACGGATCATGCAAATCGCCGGGGCGGGGATGTTGCTGCCCAGCCTGGCGCCGGCGGTGATCGCCTCGGTCAAGGATCGGCCCAAGCTCACCGATGGCGTGCAGTCCGGGGACTTGCAGGGCGATCGGGCGATCATCTGGAGCCGCAGCGACCGCCCGGCGCGGATGGTGGTGGAGTGGGACACCCGCAGCATGTTCACCAACCCGCGGCGCCTGGTCTCGCCGCTGGCCGATGCCCGCACCGACTTCACCGCCCGGGTGGACCTGAGCGGGCTGCCGGTCAACCAGGCGATTTTTTATCGAGTGACCTTCGAGGACGCCCGCACCGGGGTGGCCAGCGAACCCTGGTTCGGCCATTTGC # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //