Array 1 121126-119443 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBGN01000053.1 Campylobacter coli isolate 1718, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 121125 36 100.0 30 .................................... GTTAGCCCCCATTATATAGTGCTTAGAAAG 121059 36 100.0 30 .................................... AAAACAACTTCAATGTGTTTATCGCCATAA 120993 36 100.0 30 .................................... GATGATACAGAATATATTCTATATCCTTCG 120927 36 100.0 29 .................................... CAATCATCAATAGCAATCATCAATAGCGA 120862 36 100.0 30 .................................... TTTGCAAAAAAGAGTATTAACCCTAAGAAA 120796 36 100.0 30 .................................... AAAATTAATCCGCTAAAGCAAGCCTTTGGA 120730 36 100.0 30 .................................... AATTTGTTTGTAACTTCAACTGGTGAGCCT 120664 36 100.0 30 .................................... GCAATATACACATTAGCACTGTTTGTCTTT 120598 36 100.0 30 .................................... TGATGCCAAATGATAAAGGACAATGGCTTT 120532 36 100.0 30 .................................... AAGCTTTAATCAAAATCCAATATGGGGGAG 120466 36 100.0 30 .................................... TCAAGCCTATCAAGTTCTTCTTTATGTTTT 120400 36 100.0 30 .................................... TTTGTATTGAGAAAAGTATAATTTTTACTT 120334 36 100.0 30 .................................... AACTGAAAGTTGATTTGCTGAGCTATCAAT 120268 36 100.0 29 .................................... CTTTTTAATTCAAAATCTTTTAACACTTT 120203 36 100.0 30 .................................... TCATAAATACTATTTAATGAGCCTTTCGGG 120137 36 100.0 30 .................................... AATTTAAATTTTGCAAATCATATGCACTTT 120071 36 100.0 30 .................................... TAGTGAGGATGAGAATGTTTCTGTGGACTA 120005 36 100.0 30 .................................... ACACAAATAAATCCTACCTTTGTTTGCTTC 119939 36 100.0 30 .................................... AATACCACTCTTTGTTTCATAAGCTCTTCA 119873 36 100.0 30 .................................... AAAGAGCTTGTTAAAAACGATATCTACGCT 119807 36 100.0 30 .................................... ATAGCATTTTCAATTAAATCATCATCATTA 119741 36 100.0 30 .................................... TCAAATGTAACTTATTACAATACAACCGGC 119675 36 100.0 30 .................................... AAGCTTTTAGAAATATATCAAATGGATGAT 119609 36 100.0 30 .................................... CCTAAAACACTTTTAGAGTATAAACATTTT 119543 36 100.0 29 .................................... CAAGTTTAGGATTAACCTTAAATGAAGGT 119478 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : AAGACCATTACAAGCTTCTTTTATATTTAATTCACAAGCTTTTTCATAGTATTGTTTAGCTTTAGAATAATTACCTTGTTTATGTTGTTCTTTTCCAAGATCAAAATAATTATCATTTGAATAAACGCAAACAGGTATTAAAGTAAATACAAATATGAAATATTTCATTACCATCAATTTTCCTTTTAAAGCTATATTATTTGAAATTTTTATATTCTTTACAATCATATTCATCTCCTAATTCACAAGATTTTTCATAATTAATTCTTGCTGTATGGCAATCTCTTTCGATGTACTTACACTTCTTTAATAAAATAACCATCGTTCGAAAATACATTTGTTGTTAATAAAATTAAGAACTAATATATTTAATTTTATTTGTTGCCTTTTATAATTAATTGTTAATTATAGCATAAATTATAATTTACAATTGATAATATGTTATGTAAAAATTAAAGTTTGAAAAAATTTATTTTTTCAAATTCCAAAAGCGACATATT # Right flank : GGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTTGTTTTCTTTGTATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCATACTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCGCCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCAGTTATGGTTAATACTCTTATATTGCCACAAGGGGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTGCAAATTTTAACATATACGCTAAATTGCATCATAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //