Array 1 76164-72952 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMUG01000019.1 Acinetobacter baumannii strain Pesh-14 AB02_S27_L001_R1_001_trimmed_contig_19_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 76163 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 76103 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 76043 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 75983 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 75923 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 75863 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 75803 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 75743 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 75683 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 75623 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 75563 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 75503 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 75443 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 75383 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 75323 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 75263 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 75203 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 75143 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 75083 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 75023 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 74963 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 74903 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 74843 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 74783 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 74723 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 74663 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 74603 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 74543 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 74483 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 74423 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 74363 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 74303 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 74243 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 74183 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 74123 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 74063 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 74003 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 73942 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 73882 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 73822 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 73762 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 73702 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 73642 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 73582 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 73522 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 73461 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 73401 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 73341 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 73281 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 73221 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 73161 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 73101 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 73041 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 72981 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //